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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10492#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3119 fasta sequence
[ACAAAAAAACAAGCCAAGAAAAGGCCACCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAGTTTTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGGGTTTCCTTGGAGTGGAGTCTCTTGCCCGGATCGCCACACTCGTTCTATGGGCTGTGTCAGTTCGAAGCAATTCCATGGCGAGGAGCAGCGTGGCGGCGAGGGGAAGCCCCGGCGGCGCCCATCTAGCAACTCTCTGAGGCGTCTTGTTAGTTACAATTCCAGCAAGAGGCATGAGCACTTTGAGGAGGAGGATGAAGAAGGTGTGGTTGTGTCAGCCACCTCCTCCAGTGCTGGACATCGTGTAGGGAATGATGTGAGCACGGCTAGGCTCATCCGGAAGCCCCCCGCGCCGGTGGTTGAGGCTGTGGCTGTGCCTGTGGCTGCATTGCCAGATGAGGCGGCTTCTGTGGCGGTTAGCGTGGTTGATGTGGAGAGGCCAGTTGCCGCGCCTGCGAATTGGAGGCGTGCTCCGAATGGCGCGGCGGAGCAAGAGCCTAGGAGTGGTGGTACAAGGAGTGAGGCGAAACCGAGGATTACAGATGTTGTGCCCAATGGAGTGCAGGGGGGGCATGCGGCAGCTGGCTGGCCAAGGTGGCTCACAGAGGTCGCAGCAGAGGCAGTCCGTGGGTGGCAACCTCGGAAGGCAGAGTCTTTCGAGAAGTTGGACAAGATAGGGCAAGGTACATACAGTAGTGTTTACAAAGCACGTGATCTTGAGAGTGGAAAAATTGTGGCACTTAAGAAAGTTCGGTTTGCCAACATGGACCGTGAGAGCGTGCGGTTCATGGCAAGGGAAATTCACATCTTAAGAAGACTTGATCACCCAAATGTTATTAAGCTTGAAGGTTTGGTGACGTCGCGCATGTCTAGTAGCTTGTATCTTGTATTTGAATACATGGAGCATGATCTAGCGGGACTTGCAGCTACACCTGGCATAAAGTTCACAGAGCCTCAGGTCAAGTGTTACATGCAACAACTACTCTCTGGACTTGAACACTGTCATAATCGTGGTGTTTGGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACAATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAATGATGTATACAAGGATTTCCCTCCTCCGGCTTTAGCGCTATTGGATTGTTTACTTGCTGTAGAACCCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCTGGGGCGTAGAAAGCAACTTCCAGCCACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCCAAAAGCAGCAGTAATAAGTTTATTCCCAAGGAGGGATGCTGTCACTGGCTTCCCCATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCCTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAACCCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC-TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG-CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA-AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGAAGTACAGATCATTGGTGCCAAAAAATG]
[+] EMBL AU161196 [ACAAAAAAACAAGCCAAGAAAAGGCCACCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAGTTTTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGG ]
[+] EMBL AK072696 [ CCTCAGTGAGAGAGGGAAGGGAGGGAGGGAGGGAGGAGGGAGAGATCTCCTGCTGCCTCGCGATTTCCGGCGGCAAAAAGGTTCGATTTTGATCCCCGTCTCCGGATTCGCCCAGCCCCGATTTGCCCTTGCGGCGCGGCCTCGCTGGTTTCTGCAAGTGATAGAGAAAGATCCCGATTTTAACAGTGGCAGTTCGTGGCCCGCCCGCTTCTGCTTCTGGTTTTGGGCGATTCGGCGGTTGCTGGACTGGAGGGAGTCGCGGGTGCAGTGTTCTGGTTCGGATCTGAGCGGGTGTTGGGTGTTTTCAACTCTAATTCGGGCGAGCAATGAGGGTTCTTGATGCGTGACCTGATGCGGGAGGCGTATTGGGAGAAGATCTCTTGAAG TTTTTTTTTTTTTGGTTTTGGTTTGTTTGGGGGGTTTCCTTGGAGTGGAGTCTCTTGCCCGGATCGCCACACTCGTTCTATGGGCTGTGTCAGTTCGAAGCAATTCCATGGCGAGGAGCAGCGTGGCGGCGAGGGGAAGCCCCGGCGGCGCCCATCTAGCAACTCTCTGAGGCGTCTTGTTAGTTACAATTCCAGCAAGAGGCATGAGCACTTTGAGGAGGAGGATGAAGAAGGTGTGGTTGTGTCAGCCACCTCCTCCAGTGCTGGACATCGTGTAGGGAATGATGTGAGCACGGCTAGGCTCATCCGGAAGCCCCCCGCGCCGGTGGTTGAGGCTGTGGCTGTGCCTGTGGCTGCATTGCCAGATGAGGCGGCTTCTGTGGCGGTTAGCGTGGTTGATGTGGAGAGGCCAGTTGCCGCGCCTGCGAATTGGAGGCGTGCTCCGAATGGCGCGGCGGAGCAAGAGCCTAGGAGTGGTGGTACAAGGAGTGAGGCGAAACCGAGGATTACAGATGTTGTGCCCAATGGAGTGCAGGGGGGGCATGCGGCAGCTGGCTGGCCAAGGTGGCTCACAGAGGTCGCAGCAGAGGCAGTCCGTGGGTGGCAACCTCGGAAGGCAGAGTCTTTCGAGAAGTTGGACAAGATAGGGCAAGGTACATACAGTAGTGTTTACAAAGCACGTGATCTTGAGAGTGGAAAAATTGTGGCACTTAAGAAAGTTCGGTTTGCCAACATGGACCGTGAGAGCGTGCGGTTCATGGCAAGGGAAATTCACATCTTAAGAAGACTTGATCACCCAAATGTTATTAAGCTTGAAGGTTTGGTGACGTCGCGCATGTCTAGTAGCTTGTATCTTGTATTTGAATACATGGAGCATGATCTAGCGGGACTTGCAGCTACACCTGGCATAAAGTTCACAGAGCCTCAGGTCAAGTGTTACATGCAACAACTACTCTCTGGACTTGAACACTGTCATAATCGTGGTGTTTGGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACAATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAATGATGTATACAAGGATTTCCCTCCTCCGGCTTTAGCGCTATTGGATTGTTTACTTGCTGTAGAACCCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCTGGGGCGTAGAAAGCAACTTCCAGCCACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCCAAAAGCAGCAGTAATAAGTTTATTCCCAAGGAGGGATGCTGTCACTGGCTTCCCCATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCCTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAACCCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGA ]
[+] EMBL CF324714 [ TCTGGACTTGAACACTGTCATAATCGTGGTGTTTTGCATCGGGATATAAAGGGCGCAAATCTCCTCATTGACAACAATGGTGTTCTCAAAATAGCAGACTTTGGTCTAGCCACATTCTTTAATCCTAACCAAAAGCAACATTTGACAAGTCGTGTGGTAACATTATGGTACCGACCTCCTGAACTATTGCTGGGTGCTACTAACTATGGTGCTGCTGTTGATCTCTGGAGTGCTGGTTGCATTCTTGCGGAATTGCTGTCTGGGAAGCCTATCATGCCAGGGCGAACAGAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGTTCACCATCAGAGGATTTCTGGGCTAATTTGAAGTTGTCACGTGCTACAATATTCAAGCCACAACATCCTTATCGTCGATGTGTGAA ]
[+] EMBL AK104081 [ GCTGTAGAA CCTCAGAATAGGGGTACTGCTGCTTCGGCCCTTGGAAGCGAATTCTTCACGACAAAGCCTTATGCTTGTGATCCATCAAGTCTACCTAAATATCCTCCAAGCAAGGAATATGATGCTAAGCTTCGAGACGAGGAGGCTAGAAGGCAAAGAGCAGCTGCAGTTAAAGGACATGAATCTGAAGCT GGGCGTAGAAAGCAACTTCCAG CACCAAATGGCAACAACGAATTGCAGCAACGACGGGTTCAGCTTAATCCAAAAAGCAGCAGTAATAAGTTTATTCCAAAGGA GGATGCTGTCACTGGCTTCCCAATTGATCCTCCAGGAAGAGCTGGAGACAATGTTTACCCTCAGCGTGCGCCTCTGATGCATGCTGGTCGTTCATCCTCTACTCTGGGCCGATCAAGTGGCACTGATCAGAATGCTCAGAGGTTTTACACATCTCAAATTGCTGCTGCTGAGATGTCTACTGCAACTGGTGGGCAGCGAGGCAATGCCACTAAGCTGTCCTCCAA CCTTGGGGAGAGTGCCAGGAGACAATATTTGAGAGAGCATCGATCTAGTTCAAGATATAGTCAACTTGCTGCTGCTGAACCCTCTGACAGACCTGAATGGACACACCAATTCCAAGAAAGACCATCATCTTCCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGACAAGAGAAAAAATAATATAATGGAAGTACAGATCATTGGTGCCctctggtg]
[-] EMBL CA762106 [ CAGACCTGAATGGACGCATCAATTCCAAGAAAGACCATCATCTTTCCACCGCAAAGATGATGGGGCAGCAAATAAGGAACCTACTGTGGTGAATGGCGCTAAGAAGAGCAGGATCCACTAC TCAGGACCATTAATGCCTCTTGGAGTAAGCATGGAAGAAATCCTTCGAGAGCGCGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTTGCCATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAACAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAATCAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTATGCTAGATGTTCCACCCATGG CAGTGGTTTGGTTTTCTCCAGCAAAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCA AGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCGCCAATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTTGGCAGATGTCAAGAGAAAAAA AATATAATGGAAGTACAGATCTTTGGTGCCAAAAAA ]
[+] EMBL BI807617 [ aGAACCTACTGTGGTGAATGGC CTAAGAAGACCAGGATCC CTAC TCAGGACC TTAATCCCTCCTGGAGTAAACATGGAAGAAATCCTTCGAGAGCACGAGC GCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCA TCGGAATCGCTTCTGTACACTACCCAGAATGCCAGACCGTAGGCGAAACAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGTCCCCATTTCAGCCATGAAAAAC ATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTGCCAGTGGTTTGGTTTTCACCAGC AAAGGAAACCTGTTCCTGTAGAGATTCACCGCCTGTCCACAGCTTAGCATAGGGCGTCGAAAATATTTGCTGAAGATTTGGTTGTCCACAGCCACC ATTGTATATCTCGAGAGAGTATCCTCCCCTTGAAATTGATTCTTACACCTGTTTTTT GCAGATGACAAGAGAAAAAA AATATAATGGAAGTACAGATCATTGGTGCCAAAAAAa ]
[+] EMBL C97437 [ CTAAGAAGACCAGGATCCACTACTTCAGGACCATTAATGCCTCCTGGATTAAACATGGAAGAAATCCTTCGAGAGCACGAGCGGCAGATCCAACAAGCTGTACGGAGGGCGCGCCTCGACATGGGAAAGGGCAAGAATCACGTCGAGAGAGACCAGTCGGAATCGCTTCTGTACACTACCCAGAATGGCAGACCGTAGGCGAAAAAAACGCTCAGGATCGCGATTCAATGTGTTGTGGAGCCCCCATTTCAGCCATGAAAAACAATAGAAAGTAGCGTATGTTTCTGCGCCGTCAAAGCGGAGAGGTTTCTTTCTGCTAGATGTTCCACCCATTG CAGTGGTTTGGTTTTCACCAGCAAAAAAAAAaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||