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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10529#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3553 fasta sequence
[TGCTGCGGCCGAGCGGTGCGCGCTCGGCCTCGGCGTCCACGCGCGCCCCGCCTCGCCCTCGCCGGCGCTGCTCCCGCCGGCGGCTCTCCGCCGCGGCCGCCGCCTCCCCGCGGCCACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCTCCTGCATCTGAAAGCACTGTGACTACTAAAGTCCCAGAGGAACTTGTACAAGTCCAGGCTTACATAAGGTGGGAGAAAGCAGGCAAGCCAAATTATGCCCCAGAGAAGCAATTGGTCGAGTTTGAGGAAGCAAGGAAGGAACTGCAGTCTGAGTTGGATAAGGGGACCTCAGTTGAGCAGTTGAGGAACAAAATTTTGAAAGGGAACATTGAGACAAAAGTTTCCAAGCAGCTGAAGGACAAAAAATACTTTTCTGTGGAAAGAATTCAGCGGAAAAAACGAGATATTGTGCAACTACTTAAAAAACACAAGCCTACTGTTATGGAAGCGCAAGTAGAGACTCCTAAACAACCCACTGTTCTGGATCTCTTCACAAAGTCATTACAGGAGCAGGATAACTGTGAGGTTCTAAGCAGAAAGCTTTTCAAGTTCGGTGACAAGGAGATACTGGGAATTACCACCGTTGCTCTAGGAAAAACCAAAGTTCACTTGGCAACAAACTATATGGAGCCACTTATACTTCACTGGGCGTTGTCAAAAGAGAATGGAGAGTGGCAGGCACCTCCCTCAAGCATATTGCCATCTGGTTCATCATTGCTAGACAAGGCATGTGAAACTTCATTCAGTGAATATGAATTGAATGGTCTGCATTGTCAGGTTGTTGAGATCGAGCTTGACGATGGTGGATACAAGCGGATGCCCTTTGTTCTCCGGTCTGGTGAAACATGGATGAAAAATAATGGCTCTGACTTTTACTTGGATTTCAGCACCAAAGTTGCAAAAAATACAAAGGATACTGGTGATGCTGGTAAAGGCACTGCTAAGGCCTTGCTTGAAAGAATAGCAGATCTAGAGGAAGATGCCCAACGATCTCTTATGCACAGATTCAATATTGCAGCAGATCTAGTTGACCAAGCAAGAGATAATGGATTATTGGGTATTATTGGAATTTTTGTTTGGATTAGGTTCATGGCTACAAGGCAACTAATATGGAACAAGAACTACAATGTGAAGCCACGTGAGATAAGCAAAGCACAAGATAGGTTTACAGATGATCTTGAGAATATGTACAGAACTTACCCACAATATCAGGAGATCTTAAGAATGATAATGTCTGCTGTTGGTCGGGGAGGTGAAGGTGATGTTGGTCAACGCATTCGTGATGAGATATTAGTAATCCAGAGAAATAATGACTGCAAAGGTGGAATGATGGAGGAGTGGCACCAGAAACTGCACAACAATACAAGCCCAGATGATGTAGTGATCTGCCAGGCCCTACTTGATTATATCAAGAGTGATTTTGATATTGGTGTTTACTGGGACACCTTGAAAAAAGATGGTATAACAAAAGAGCGTCTATTGAGCTATGATCGACCGATTCATTCAGAGCCAAATTTCAGGAGTGAACAGAAAGATGGCTTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGGTTATTGGAGGCTCGAGCTGAACTACACCCTTTGCTCCTTGGCTCTCCTGAACGCATGAAGGATCTTATCTTTTTAGACATTGCTCTTGATTCTACTTTCAGGACAGCAGTTGAAAGATCATATGAGGAGCTCAATAATGTAGAACCAGAGAAAATTATGTACTTCATCAGTCTTGTCCTTGAAAATCTTGCTTTATCCACCGACGACAATGAAGATATCCTATATTGCTTAAAGGGATGGAATCAAGCCTTGGAAATGGCTAAACAGAAAAACAACCAATGGGCTCTCTATGCTAAAGCATTTCTGGACAGAACCAGACTTGCCCTTGCAAGCAAGGGAGAACAATACTATAATTTGATGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
[+] EMBL CB644343 [TGCTGCGGCCGAGCGGTGCGCGCTCGGCCTCGGCGTCCACGCGCGCCCCGCCTCGCCCTCGCCGGCGCTGCTCCCGCCGGCGGCTCTCCGCCGCGGCCGCCGCCTCCCCGCGGCCACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCT ]
[+] EMBL AK103463 [ CACCACCACCCTCGCCGTCTCCCGTCGGAGCCTCCTCGCCCCTCGCGCCATCGCCGCTTCCACCGGCCGCGCCTCCCCGGGCCTTGTCGGAAGGTTCACCCTGGATGCCAACTCCGAGCTTAAGGTGACATTGAACCCAGCACCGCAGGGTTCGGTGGTGGAGATCAATCTAGAGGCAACTAACACCAGCGGCTCCCTGATACTGCATTGGGGCGCCCTTCGCCCGGATAGAGGAGAATGGCTCCTACCATCCCGGAAACCAGATGGCACGACAGTGTACAAGAACAGGGCTCTTAGGACGCCTTTTATAAAGTCAGGTGATAACTCCACGCTGAAAATTGAGATAGATGATCCTGCAGTGCAAGCCATTGAGTTCCTCATATTTGATGAGGCACGGAATAATTGGTACAAAAACAATGGCCAGAATTTCCAAATTCAGCTACAAGCGAGCCAATATCAAGGGCAGGGTACATCTACTGCTACTTCTTCTACTGTGGTTCCAGAGGATCTTGTGCAGATACAATCATATCTTCGGTGGGAAAGAAAGGGAAAGCAGTCATATACACCTGAGCAAGAGAAGGAGGAGTATGAAGCAGCACGAACTGAGTTGATAGAGGAATTAAACAAGGGTGTTTCTTTGGAGAAGCTACGAGCGAAACTGACAAAGACACCTGAGGCAACTGATAGTAATGCTCCTGCATCTGAAAGCACTGTGACTACTAAAGTCCCAGAGGAACTTGTACAAGTCCAGGCTTACATAAGGTGGGAGAAAGCAGGCAAGCCAAATTATGCCCCAGAGAAGCAATTGGTCGAGTTTGAGGAAGCAAGGAAGGAACTGCAGTCTGAGTTGGATAAGGGGACCTCAGTTGAGCAGTTGAGGAACAAAATTTTGAAAGGGAACATTGAGACAAAAGTTTCCAAGCAGCTGAAGGACAAAAAATACTTTTCTGTGGAAAGAATTCAGCGGAAAAAACGAGATATTGTGCAACTACTTAAAAAACACAAGCCTACTGTTATGGAAGCGCAAGTAGAGACTCCTAAACAACCCACTGTTCTGGATCTCTTCACAAAGTCATTACAGGAGCAGGATAACTGTGAGGTTCTAAGCAGAAAGCTTTTCAAGTTCGGTGACAAGGAGATACTGGGAATTACCACCGTTGCTCTAGGAAAAACCAAAGTTCACTTGGCAACAAACTATATGGAGCCACTTATACTTCACTGGGCGTTGTCAAAAGAGAATGGAGAGTGGCAGGCACCTCCCTCAAGCATATTGCCATCTGGTTCATCATTGCTAGACAAGGCATGTGAAACTTCATTCAGTGAATATGAATTGAATGGTCTGCATTGTCAGGTTGTTGAGATCGAGCTTGACGATGGTGGATACAAGCGGATGCCCTTTGTTCTCCGGTCTGGTGAAACATGGATGAAAAATAATGGCTCTGACTTTTACTTGGATTTCAGCACCAAAGTTGCAAAAAATACAAAGGATACTGGTGATGCTGGTAAAGGCACTGCTAAGGCCTTGCTTGAAAGAATAGCAGATCTAGAGGAAGATGCCCAACGATCTCTTATGCACAGATTCAATATTGCAGCAGATCTAGTTGACCAAGCAAGAGATAATGGATTATTGGGTATTATTGGAATTTTTGTTTGGATTAGGTTCATGGCTACAAGGCAACTAATATGGAACAAGAACTACAATGTGAAGCCACGTGAGATAAGCAAAGCACAAGATAGGTTTACAGATGATCTTGAGAATATGTACAGAACTTACCCACAATATCAGGAGATCTTAAGAATGATAATGTCTGCTGTTGGTCGGGGAGGTGAAGGTGATGTTGGTCAACGCATTCGTGATGAGATATTAGTAATCCAGAGAAATAATGACTGCAAAGGTGGAATGATGGAGGAGTGGCACCAGAAACTGCACAACAATACAAGCCCAGATGATGTAGTGATCTGCCAGGCCCTACTTGATTATATCAAGAGTGATTTTGATATTGGTGTTTACTGGGACACCTTGAAAAAAGATGGTATAACAAAAGAGCGTCTATTGAGCTATGATCGACCGATTCATTCAGAGCCAAATTTCAGGAGTGAACAGAAAGATGGCTTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGGTTATTGGAGGCTCGAGCTGAACTACACCCTTTGCTCCTTGGCTCTCCTGAACGCATGAAGGATCTTATCTTTTTAGACATTGCTCTTGATTCTACTTTCAGGACAGCAGTTGAAAGATCATATGAGGAGCTCAATAATGTAGAACCAGAGAAAATTATGTACTTCATCAGTCTTGTCCTTGAAAATCTTGCTTTATCCACCGACGACAATGAAGATATCCTATATTGCTTAAAGGGATGGAATCAAGCCTTGGAAATGGCTAAACAGAAAAACAACCAATGGGCTCTCTATGCTAAAGCATTTCTGGACAGAACCAGACTTGCCCTTGCAAGCAAGGGAGAACAATACTATAATTTGATGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
[+] EMBL CA755514 [ TTACTCCGTGACTTGGGCAATTATATGAGAAGCCTCAAGGCAGTGCATTCTGGTGCTGATCTTGAATCTGCTATAGCAACTTGCATGGGATACAAATCAGAGGGTGAAGGTTTCATGGTTGGTGTTCAGATTAATCCAGTGAAGGGTTTGCCATCTGGATTTCCTAAATTGCTTGAATTTGTACTTGACCATGTTGAGGATAAATCAGCAGAACCACTTCTTGAGGGG ]
[+] EMBL CB671798 [ TGCAGCCCTCAGCTGAATATCTTGGCTCGTTACTTAACATTGACCAATGGGCAGTTAATATCTTTACAGAAGAAATTATTCGTGGTGGATCAGCTGCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
[+] EMBL CB677190 [ GCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
[+] EMBL CB677107 [ GCTACCCTGTCTGCTCTTCTGAATCGGATTGATCCTGTTCTTAGGAATGTTGCACAGCTTGGAAGTTGGCAGGTTATAAGCCCAGTTGAAGTATCAGGTTACATTGTAGTGGTTGATGAATTGCTTGCTGTTCAAAACAAATCCTATGATAAACCAACTATCCTTGTGGCAAAGAGTGTCAAGGGAGAGGAAGAAATACCAGATGGAGTTGTTGGTGTTATTACACCTGATATGCCAGATGTTCTCTCCCATGTATCAGTCCGAGCAAGGAATTGCAAGGTTTTATTTGCAACATGCTTTGATCCTAACACCTTGTCTGAACTCCAAGGACATGATGGGAAAGTGTTTTCCTTCAAACCTACTTCTGCAGATATCACCTATAGGGAGATTCCAGAGAGTGAACTGCAATCAGGTTCTCTAAATGCAGAAGCTGGCCAGGCAGTGCCATCTGTGTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTCTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCAGTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
[+] EMBL C71741 [ TGGCCAGGCAGTGCCATCTGTNTCATTAGTCAAGAAGAAGTTTCTTGGAAAATATGCAATATCAGCAGAAGAATTCTCTGAGGAAATGGTTGGGGCCAAGTNTCGCAACGTAGCATACCTCAAAGGAAAAGTACCCTCATGGGTTGGTGTCCCTACATCANTTGCGATTCCATTTGGGACCTTTGAGAAGGTTTTGTCTGATGAAATCAATAAG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||