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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10546#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2328 fasta sequence
[CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTATAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGGCCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAAAAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCAAAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTCCTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTAATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATCGAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGAGCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATGGGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCATTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTGCAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTCGCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTGCAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTGTTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACAAGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGTGAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTGCAAAGGGAAGACCATGTGGTCATCAACATTTGGGTAACATACGTACCGTTGGATGACAAAACCCAAAGTTATAGCAAGATTTGTCCCTGAATAACACATGGGAATCATGACATTTGTGGTACTGTGATGCATACAATGGTAGCTAAGCATGGAAGACTTGCCCTAGAGTGAGCTAATTTAGAACTCTTAACATCATCATTGAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATTTAGCCTCAAACTGAAAAGTTCGGTACATCATATCTTGTCCAAGAAGCGAGATGCTTGTATTTCAAATAGAAAAAAGCATACCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAGGGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTCCATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAAATCCGATGAC]
[+] EMBL AK069470 [CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTATAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGGCCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAAAAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCAAAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTCCTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTAATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATCGAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGAGCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATGGGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCATTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTGCAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTCGCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTGCAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTGTTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACAAGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGTGAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTGCAAAGGGAAGACCATGTGGTCATCAACATTTGGGTAACATACGTACCGTTGGATGACAAAACCCAAAGTTATAGCAAGATTTGTCCCTGAATAACACATGGGAATCATGACATTTGTGGTACTGTGATGCATACAATGGTAGCTAAGCATGGAAGACTTGCCCTAGAGTGAGCTAATTTAGAACTCTTAACATCATCATTGAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATTTAGCCTCAAACTGAAAAGTTCGGTACATCATATCTTGTCCAAGAAGCGAGATGCTTGTATTTCAAATAGAAAAAAGCATACCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAGGGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTCCATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAAATCCGATGAC]
consensusID : consensus_10546#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1857 fasta sequence
[GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGAT-GGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCA-AAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTCTAGATTGTAACGACAGCAACTTCACAGCAACATCTGTTCCATCCTTGAGAGTTCCCTTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA-TTATATGGATCACTTTGTTGC-TGCCCGGTCC-TTGACCTC-TTGAAAAAGAGAGAAAAACAAC-TCATCACTGAGATGTTTCAAGCTATGG-AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAGGAGTTTCTACTCCTCAGCCATGTCAG]
[-] EMBL AK103523 [GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGTTGAGCGCGCCATGAT GGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTTGAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCATCTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTGGGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGACCATAGAGCTGTCTATGGCCTTCTCCAAACACCCCTGATCATAACATTTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCA AAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTCTAGATTGTAACGACAGCAACTTCACAGCAACATCTGTTCCATCCTTGAGAGTTCCCTTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA TTATATGGATCACTTTGTTGC TGCCCGGTCC TTGACCTC TTGAAAAAGAGAGAAAAACAAC TCATCACTGAGATGTTTCAAGCTATGG AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAG ]
[-] EMBL AU091524 [ ttttTTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATGTATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACACTTNGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATANATATATATATNTNTNTGTGTGTGTGTGTGTGTGTGACTCAGCAATGTGTTCAGGCTCAGTGNATGGGGATGATGCAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATAATATCGTCTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCGGTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGANGACGAGGGAGTTNAGCGCGCCATGATGGGAGGT ]
[-] EMBL CF304128 [ TTCCATGTCTTCTCAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTATTTCCACAAGAAGAACACCANAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGATGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATGCATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTATCAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCATGGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGAACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGATAATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGATTCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAA ]
[-] EMBL CF318310 [ TTGTATACAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTTGCCTTAGCCAGCTCCTTATAGCTGTATCTTGTTATGTTCTCAGCACCAGAGAAGACTTCA TTATATGGATCACTTTGTTGC TGCCCGGTCC TTGACCTC TTGAAAAAGAGAGAAAAACAAC TCATCACTGAGATGTTTCAAGCTATGG AAAACACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAAAAGGAGTTTCTACTCCTCAGCCATGTCAG]
[-] EMBL C26100 [ ggCTTCATTTATATGGATCACTTTGTTGCTTGCCCGGTCCTTTGACCTCTTTGAAAAAGAGAGAAAAACAACTTCATNACTGAGATGTTTCAAGCTATGGAAAAANACAGCTGTGTTGTGCCTGGCTTAATTGAGATGTTGTTCGATGTATGCACACAGAGATNATAGATGTTCAGCAACAGCCATTGTATCCTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGAAGAACCCGNCGGCTT TCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCAC CCGCGCGCGGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCGAAGCGAAAAAACAAAACGAAGAGAGAT ]
consensusID : consensus_10546#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 766 fasta sequence
[TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGCAGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGCGGAAGCCGTCGGGTTCTTCGATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGTCGGTTTCGCCGCTTGGATCGAGTAATCAATCACTCCGTACTAGATACCAGCATAGATATTCTGTCATGTGACTGTTCAGTGCCACTTCCATGGGGGCATGGGGCATGGGTTACAATCCCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGAAGATACCCTTTTGTTATTGATTGATCCAGTTTGGGATACAATGGCTGTTGCTGAACATCTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGCCAGGCACAACACAGTTGTGTTTTCCATAGCTTGAAACATCTCAGTGATGAGTTGTTTTTCTCTCTTTTTCAAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCTGAGAACATAACAAGATACAGCTATAAGGAGCTGGCTAAGGCAACACTGAATTTTGACCAATCCAATAAGATTGGTGAGGGAGGTTTTGGACCTGTATACAAAGGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAAGGTGTGAAGGAGTTCCTTAATGAACTTATGGCAATCTCTGAC]
[+] EMBL CB619125 [TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGCAGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGCGGAAGCCGTCGGGTTCTTCGATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGTCGGTTTCGCCGCTTGGATCGAGTAATCAATCACTCCGTACTAGATACCAGCATAGATATTCTGTCATGTGACTGTTCAGTGCCACTTCCATGGGGGCATGGGGCATGGGTTACAATCCCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGAAGATACCCTTTTGTTATTGATTGATCCAGTTTGGGATACAATGGCTGTTGCTGAACATCTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGCCAGGCACAACACAGTTGTGTTTTCCATAGCTTGAAACATCTCAGTGATGAGTTGTTTTTCTCTCTTTTTCAAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCTGAGAACATAACAAGATACAGCTATAAGGAGCTGGCTAAGGCAACACTGAATTTTGACCAATCCAATAAGATTGGTGAGGGAGGTTTTGGACCTGTATACAAAGGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAAGGTGTGAAGGAGTTCCTTAATGAACTTATGGCAATCTCTGAC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10546#0 CTTGCTGCACAGCTTATTTTTTTTCAAGAATGACCAAAAGAATTACATGTTAATATATTA 60
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TAAGAAGAGAGCAAAGTTTAGTTACGCAACGCAAACGGTCAGAAAAGCCGTTGTCAGGGG 120
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CCAAGGAAAAAAAAAAGAAACCAAAAACAAATACAGAAAAGATTAGCCACTGAGAAAGAA 180
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 AAACTCGTTTCTGGACATCTGCAGATGCATTCTTTCTTTGAAGGACAGGTTTTTCTGGCA 240
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 AAAAATAAAAAGAACTTCAGTTGGATGAACTAATTAAGCAGAAGCCCTAATGTACAATTC 300
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CTGGCTTAACCTGCCCATAATTGAGGTAAATAATCGTCGCCACTACATTGTCTCGGCCTA 360
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ATGGAAGTTAAAAATGTCTTGACTGAATATGAGAAGCTGTAGCTGCAAAGTTCAGAAATC 420
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GAATACCCTGATGAATGCTGCATGCCATCCTGGCTTTCCAGTGCTCCCTTTCTGAGCTGA 480
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GCCCCTAGCTGCTCATGTCTTTCTGGTGCCTGCCATCTGCCATTGTCACACTGCCTCATG 540
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GGCCCCACCTGTCAGTGACACATGGGAGTGGCAGTGTGTGCGTGTCATCTGAAGAACCCA 600
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TTATATCCTGTGGCCATGTTAGAGTCTTCAGTTTAGCCGGTCCCTTCCATCTTCTCCTTG 660
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CAGATGATGATGGATGCTTTGCTTCTGCTGCATGCTATCCTGCCTGCTTGATCCAACGTC 720
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GCCTGCGACCATGTCGGAAGCTTACGAGACACCGGCTGCCGCTCTAACCTAATTCCACTG 780
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CAGATGAGAGGGGCCCTGCAAGCTTTGTGTACGTCCATGTCTGTGCCTGATGGCATCCTG 840
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TTCCTGTCCATGCCTGTGCATACCACAGATGCAGGCTGAGAAGAGAAGAAACTGCTCACA 900
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 AGATACACAGAAACTTGGGGCTAAGTACAGGACAGAATGTGCACAGCACACACACATTGT 960
consensus_10546#1 ------------------------------------------------------------
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GAAGGAAATTGAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATG 1020
consensus_10546#1 ----------GAACTAATTGCATTTAATAGTATTCTGAAGCACAGTTCTCAGTTGGAATG 50
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACAC 1080
consensus_10546#1 TATGCAACTTCCTTTCCAGGCTTTCAGCAATTCACTGGAGTAGTGGTTTCTTGATGACAC 110
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATAT 1140
consensus_10546#1 TTTGACAATTGACAGAGTTAATTCAGGACAGAAATGGGCTGTATATATATATATATATAT 170
consensus_10546#2 -----------TCGCTTCGGGGCGAGAAGAAAAACCTGCCATTTTTCAATCTGCCGGAGC 49
* ** * * *** ** * * * ** *
consensus_10546#0 ATGTGTGTGTGTGTGT-GTGTGTG-TGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGG 1198
consensus_10546#1 ATGTGTGTGTGTGTGT-GTGTGTG-TGTGACTCAGCAATGTGTTCAGGCTCAGTGAATGG 228
consensus_10546#2 AGACATTTTCCTCTGCCGCGCGCGGCGTGGGCCGGCCGGGTCTCGACTGGCGCCGGAGGC 109
* * * * ** * * * * *** * ** ** * * * * * *
consensus_10546#0 GGATGATG-CAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATA-ATATCGT 1256
consensus_10546#1 GGATGATG-CAAATTCTACATAAAGATCATGCAAGCACAAAAAATGAAGATA-ATATCGT 286
consensus_10546#2 GGAAGCCGTCGGGTTCTTC-----GATCTTTCTCGCTTGCCGGTTTCGACTGGAGATCGT 164
*** * * * **** * **** * * ** * * * *****
consensus_10546#0 CTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCG 1316
consensus_10546#1 CTACGCTACGGTTTTCCTCTACACAACTTTACACTTTCAGAAAGAGACCCATCAGTCGCG 346
consensus_10546#2 CGGTTTCGCCGCTTGGATCGA-GTAATCAATCACTCCGTACTAGATACC-AGCATAGATA 222
* * * ** ** * ** **** *** *** * **
consensus_10546#0 GTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGT 1376
consensus_10546#1 GTCCGATATGGCGGTGACCGTGATGGAGGTGCGCGTCGTCTCCTGAGACGACGAGGGAGT 406
consensus_10546#2 TTCTGTCATG----TGACTGTTC----AGTGCCACTTCCATGGGGGCATGGGGCATGGGT 274
** * *** **** ** **** * * * * * * * **
consensus_10546#0 TGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTT 1436
consensus_10546#1 TGAGCGCGCCATGATGGAGGTCAACAGTGAGGAGGAGGATGTGGCCTTGCTCCTGAGCTT 466
consensus_10546#2 TACAATC-CCTTGTTCTGCATCACGATGAAAGCAAATGATGTGCCTCCGGTCCCGGA--- 330
* * ** ** * *** * * * * ****** * * *** *
consensus_10546#0 GAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCAT 1496
consensus_10546#1 GAGGTCCCTGAAATCCCTGATTACATCAGGCTTGCTGATCTTCTCTTTGTCGACCTCCAT 526
consensus_10546#2 AGATACCCTTTTGTTATTGATTG-ATCCAGTTTGG-GATACAATGGCTGTTGCTGAACAT 388
**** * ***** *** * *** *** * *** * ***
consensus_10546#0 CTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTG 1556
consensus_10546#1 CTCGCCTGTCAGCATGCTGATGACCATTGACATGGTGGGTCGACGTTTCGAGATGTCCTG 586
consensus_10546#2 CTATGATCTCTGTGTGCATACATCGAACAACATCTCAATTAAGC---CAGGCACAACACA 445
** * ** * *** * * * **** * * * * *
consensus_10546#0 GGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGAC 1616
consensus_10546#1 GGTGCACAAAAGACCGACTTTCAAGAATCTGCAGGCTTCGTCGACATCCACGTCATCGAC 646
consensus_10546#2 GTTGTGTTTTCCATAG--CTTGAAACATCTCAGTGATGAGTTGTTTTTCTC-TCTTTTTC 502
* ** * * ** ** **** * * ** * * * * ** * *
consensus_10546#0 CATAGAGCTGTCTATGGCCTTCTCCAAA-CACCCCTGATCATAACATTTCCATGTCTGCA 1675
consensus_10546#1 CATAGAGCTGTCTATGGCCTTCTCCAAA-CACCCCTGATCATAACATTTCCATGTCTTCT 705
consensus_10546#2 AAGAGGTCAAGGACCGGGCAGCAACAAAGTGATCCATATAATGAAGTCTTCTCTGGTGCT 562
* ** * ** * * **** ** ** ** * * * * * *
consensus_10546#0 AAGGGAAGACCATGTGGTCAT----CAACATT---TGGGTAACATACGTACCGTTGGAT- 1727
consensus_10546#1 CAAGAAGGATCTGGTCTTCGTAGGGCAATTTTGTGTCAGTGTTGCATCTTCCACTAACTA 765
consensus_10546#2 GAGAACATAACAAG-----ATA---CAGCTATAAGGAGCTGGCTAAGGCAACACTGAATT 614
* * * * * ** * * * * * *
consensus_10546#0 ---------GACAAAACCCAAAGTTATA--------------GCAAGATTTGTCCCTGAA 1764
consensus_10546#1 TTTCCACAAGAAGAACACCAAAGCTGTAAACATCTGACTTGCGTGTCACTTGTCCTCGGA 825
consensus_10546#2 TT-------GACCAATCCAATAAGATTGGTGA---GGGAGGTTTTGGACCTGTATACAAA 664
** ** * * * * * *** *
consensus_10546#0 TAACACAT--GGGAATCATGACATTT-GTGGTACTGTGATGCATACAATGGTAGCTAA-G 1820
consensus_10546#1 TGGCATATTCAGGAGCCAAGTAACCTAGTGTTCCTGCGACTCTTGTACTAACATGTGATG 885
consensus_10546#2 GGAACTCTCAAGGATGGAACAGATGTTGCTGTAAAGTTGCTGTCGTTACAATCTAGACAA 724
* *** * * * * * *
consensus_10546#0 CATG-GAAGACTTGCCCTAGAGTGAGCTAAT-TTAGAACTCTT------AACATCATCAT 1872
consensus_10546#1 CATCTGAAGGCAGAAGCTTCGCTAAACCAAAATCAGAAATTTTTGGCGTGAGGTCCTTAT 945
consensus_10546#2 GGTGTGAAGG--AGTTCCTTAATGAACTTAT---GGCAATCTCTGAC------------- 766
* **** * * * * * * * * *
consensus_10546#0 T--GAACTCTTAAAATAAAAATTAAGTTGCAGTAACAAGCCAACAGCTGTACAACATT-T 1929
consensus_10546#1 CAAGAAGTATATTGCTCGCCTTGATGTCACGGTGAACAATGTGAGGCCGGACACCATCAT 1005
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 AGCCTCAAACTGAAAAGTTCGGTACATC-----ATAT-CTTGTCCAAG------AAGCGA 1977
consensus_10546#1 GGAGGAATGCTAGTCCCTTGGCAACACCGATGCATATATTTACTCGAGCCCTCCAGTTGA 1065
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GATGCTTGT-ATTTCAAATAGAA---AAAAGCATACCTTCTCAAGAAGGATCT----GGT 2029
consensus_10546#1 ACTGTATGTTACTTTGCCTAGAACCTAGAAGGGTATGTGCAAGGCTATTGTTTTCAAGAT 1125
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CTTCGTAGGGCA--ATTTTGTGTCAGTGTTGCATCTTCCA-CTAACTATTTCCACAAGAA 2086
consensus_10546#1 AATTGTACACAAGGATTCTGTGCCTCCCTTCCACACAACAGCCATGCAGTTTGACAAGAT 1185
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GAACACCAAAGCTGTAAACATCTGACTTGCGT-------GTCACTTGTCCTCGGATGGCA 2139
consensus_10546#1 TCTCATGTGAAATGTCAGAGATTGCCATAAGTTCATTAAGGAACTCCTTCACACCTTGTC 1245
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 TATTCAGGAGCCA-AGTAACCTCTGAAAGCAAAACCACAATATAAAGAAAGGAAGAGAAG 2198
consensus_10546#1 TAGATTGTAACGACAGCAACTTC--ACAGCAACATC-TGTTCCATCCTTGAGAGTTCCCT 1302
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 GGTATAGCAGGGTGTACATATAGTTCTTAAGTTATCACAGACTAGTTTATTTTTTTACTC 2258
consensus_10546#1 TGTATA-CAGGTCCAAAACCTCCCTCACCAATCTTATTGGATTGGTCAAAATTCAGTGTT 1361
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 CATTTCATTTGCACTCTTTATTTTGATACACAGCAGGTTTCAAGACATATGGAGAGCAAA 2318
consensus_10546#1 GCCTTAGCCAGCTCCTTATAGCTGTAT-CTTGTTATGTTCTCAGCACCAGAGAAGACTTC 1420
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ATCCGATGAC-------------------------------------------------- 2328
consensus_10546#1 ATTATATGGATCACTTTGTTGCTGCCCGGTCCTTGACCTCTTGAAAAAGAGAGAAAAACA 1480
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 ACTCATCACTGAGATGTTTCAAGCTATGGAAAACACAGCTGTGTTGTGCCTGGCTTAATT 1540
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 GAGATGTTGTTCGATGTATGCACACAGAGATCATAGATGTTCAGCAACAGCCATTGTATC 1600
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 CTCGATCCAAGCGGCGAAACCGACGATCTCCAGTCGAAACCGGCAAGCGAGAAAGATCGA 1660
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 AGAACCCGACGGCTTCCGCCTCCGGCGCCAGTCGAGACCCGGCCGGCCCACGCCGCGCGC 1720
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 GGCAGAGGAAAATCTCTGCTCCGGCAGATTGAAAAATGGCAGGTTTTTCTTCTCGCCCCG 1780
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 ------------------------------------------------------------
consensus_10546#1 AAGCGAAAAAACAAAACGAAGAGAGATAGAGAGGAAAGAGAGGGAAAGGAGGAGTTTCTA 1840
consensus_10546#2 ------------------------------------------------------------
consensus_10546#0 -----------------
consensus_10546#1 CTCCTCAGCCATGTCAG 1857
consensus_10546#2 -----------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||