cluster # 10554

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Oryza sativa
cluster # 10554 cluster # 10554 Sequences # 7 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10554#0 length = 1279 sequences # 2

consensus_10554#1 length = 496 sequences # 4
consensus_10554#2 length = 314 sequences # 1

consensusID : consensus_10554#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1279
fasta sequence

                              [TTATGGCTTCACGTAGCCGAGTCGTCGAGTCAACTCGGTTGAGCTATATAAGCTCTCCATTTGCCTTGCTCTGCTTCCACGCACTCGATCGAGCTTAACTAATTAACCATCAGTAGCAAATTAAGCCTCGACCAGCTAATCAATTAATTGAGCTTGTGCTGTTAGCCGTGTCATCTATAGCTCGCTAGCTTGCCATGGTGTCCTCTGCTATGGCGGCGGTGGCGGTGGCGTTTGCTGTAGTGGTGGCCGCGACGATGAGCAGCGCGCAACTTGACCCGCACTTCTACGACGGCTTGTGCCCGGCGGCGCTGCCCACCATCAAGCGGATCGTCGAGGAGGCCGTCGCGGCGGAGCCCCGCATGGGCGCCTCGCTCCTG-CGCCTGCACTTCCACGACTGCTTCGTCAACGGTTGCGACGGGTCCATCCTGCTGGACGACACGCCATTCTTCACGGGGGAGAAGAACGCGGCGCCCAACATGAACTCCGTCCGCGGCTTCGACGTCATCGACCGCATCAAGGACGCCGTCAACGCCGCCTGCCACCGACGGGCTCGTCAGGTTCTACGCCGCCAGGCGGCGGCGAACAGCAGCATCCCGGCGCCGACGCTCAACCTCGACGGCCTCGTCTCCAGCTTCGCCGCGCAGGGCCTCTCCGTGCAGGACCTCGTCCTCCTCTCCGGCGCCCACACGCTGGGCTTCTCCCGCTGCACCAACTTCCGCGACCGCCTCTACAACGAGACGGCCACGCTCGACGCCTCCCTCGCCGCGTCGCTCGGGGGGACCTGCCCGCGTACCGCCGGCGCCGGCGACGACAACCTCGCGCCGCTCGACCCGACGCCGGCGAGGTTCGACGCCGCGTACTACGCCTCGCTGCTGCGCGCCAGGGGGCTCCTGCACTCGGACCAGCAGCTGTTCGCCGGCGGCGGCCTCGGCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTCTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATGAGTTCAAAAGTTAAATGCACT]

[+] EMBL AK065305             [TTATGGCTTCACGTAGCCGAGTCGTCGAGTCAACTCGGTTGAGCTATATAAGCTCTCCATTTGCCTTGCTCTGCTTCCACGCACTCGATCGAGCTTAACTAATTAACCATCAGTAGCAAATTAAGCCTCGACCAGCTAATCAATTAATTGAGCTTGTGCTGTTAGCCGTGTCATCTATAGCTCGCTAGCTTGCCATGGTGTCCTCTGCTATGGCGGCGGTGGCGGTGGCGTTTGCTGTAGTGGTGGCCGCGACGATGAGCAGCGCGCAACTTGACCCGCACTTCTACGACGGCTTGTGCCCGGCGGCGCTGCCCACCATCAAGCGGATCGTCGAGGAGGCCGTCGCGGCGGAGCCCCGCATGGGCGCCTCGCTCCTG CGCCTGCACTTCCACGACTGCTTCGTCAACGGTTGCGACGGGTCCATCCTGCTGGACGACACGCCATTCTTCACGGGGGAGAAGAACGCGGCGCCCAACATGAACTCCGTCCGCGGCTTCGACGTCATCGACCGCATCAAGGACGCCGTCAACGCCGCCTGCCACCGACGGGCTCGTCAGGTTCTACGCCGCCAGGCGGCGGCGAACAGCAGCATCCCGGCGCCGACGCTCAACCTCGACGGCCTCGTCTCCAGCTTCGCCGCGCAGGGCCTCTCCGTGCAGGACCTCGTCCTCCTCTCCGGCGCCCACACGCTGGGCTTCTCCCGCTGCACCAACTTCCGCGACCGCCTCTACAACGAGACGGCCACGCTCGACGCCTCCCTCGCCGCGTCGCTCGGGGGGACCTGCCCGCGTACCGCCGGCGCCGGCGACGACAACCTCGCGCCGCTCGACCCGACGCCGGCGAGGTTCGACGCCGCGTACTACGCCTCGCTGCTGCGCGCCAGGGGGCTCCTGCACTCGGACCAGCAGCTGTTCGCCGGCGGCGGCCTCGGCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTCTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATGAGTTCAAAAGTTAAATGCACT]
[+] EMBL OSR23911A            [                                                                                              TTAACTAATTAACCATCAGTAGCAAATTAAGCCTCGACCAGCTAATCAATTAATTGAGCTTGTGCTGTTAGCCGTGTCATCTATAGCTCGCTAGCTTGCCATGGTGTCCTCTGCTATGGCGGCGGTGGCGGTGGCGTTTGCTGTAGTGGTGGCCGCGACGATGAGCAGCGCGCAACTTGACCCGCACTTCTACGACGGCTTGTGCCCGGCGGCGCTGCCCACCATCAAGCGGATCGTNGAGGAGGCCGTCGNGGCGGAGCCNCGCATGGGCGCCTNGTTCCTGNGGNCTGCACTTCCACGACTGCTTCGTCAACGGTTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_10554#0
TTATGGCTTCACGTAGCCGAGTCGTCGAGTCAACTCGGTTGAGCTATATAAGCTCTCCAT
TTGCCTTGCTCTGCTTCCACGCACTCGATCGAGCTTAACTAATTAACCATCAGTAGCAAA
TTAAGCCTCGACCAGCTAATCAATTAATTGAGCTTGTGCTGTTAGCCGTGTCATCTATAG
CTCGCTAGCTTGCCATGGTGTCCTCTGCTATGGCGGCGGTGGCGGTGGCGTTTGCTGTAG
TGGTGGCCGCGACGATGAGCAGCGCGCAACTTGACCCGCACTTCTACGACGGCTTGTGCC
CGGCGGCGCTGCCCACCATCAAGCGGATCGTCGAGGAGGCCGTCGCGGCGGAGCCCCGCA
TGGGCGCCTCGCTCCTGCGCCTGCACTTCCACGACTGCTTCGTCAACGGTTGCGACGGGT
CCATCCTGCTGGACGACACGCCATTCTTCACGGGGGAGAAGAACGCGGCGCCCAACATGA
ACTCCGTCCGCGGCTTCGACGTCATCGACCGCATCAAGGACGCCGTCAACGCCGCCTGCC
ACCGACGGGCTCGTCAGGTTCTACGCCGCCAGGCGGCGGCGAACAGCAGCATCCCGGCGC
CGACGCTCAACCTCGACGGCCTCGTCTCCAGCTTCGCCGCGCAGGGCCTCTCCGTGCAGG
ACCTCGTCCTCCTCTCCGGCGCCCACACGCTGGGCTTCTCCCGCTGCACCAACTTCCGCG
ACCGCCTCTACAACGAGACGGCCACGCTCGACGCCTCCCTCGCCGCGTCGCTCGGGGGGA
CCTGCCCGCGTACCGCCGGCGCCGGCGACGACAACCTCGCGCCGCTCGACCCGACGCCGG
CGAGGTTCGACGCCGCGTACTACGCCTCGCTGCTGCGCGCCAGGGGGCTCCTGCACTCGG
ACCAGCAGCTGTTCGCCGGCGGCGGCCTCGGCGCCAACCCGGACGCGTTCCGGCGAGACT
TCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGG
TCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAATTA
AATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGG
ATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTG
AATATTGTTTAAACGTTCTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATGAG
TTCAAAAGTTAAATGCACT

consensusID : consensus_10554#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 496
fasta sequence

                              [AGGGCGAATTGGTACCGGCCCCCCCTTGGAGGTCGACCCANGGGTCCGGCCGCGTATTACGCTTCGCTGNTGCGCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTG-TTCGCCGGCGGCGGCTTCGGCGCCACCGACGGGCTCGTCAGGTTNT-ACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACNNGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTNTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATGAGTTCAAANAA]

[-] EMBL AU031965             [AGGGCGAATTGGTACCGGCCCCCCCTTGGAGGTCGACCCANGGGTCCGGCCGCGTATTACGCTTCGCTGNTGCGCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTG TTCGCCGGCGGCGGCTTCGGCGCCACCGACGGGCTCGTCAGGTTNT ACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACNNGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTNTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGT               ]
[-] EMBL C20499               [AGGGCGAATTGGTACCGGCCCCCCCTTGGAGGTCGACCCANGGGTCCGGCCGCGTATTACGCTTCGCTGNTGCGCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTG TTCGCCGGCGGCGGCTTCGGCGCCACCGACGGGCTCGTCAGGTTNT ACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACNNGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTNTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGT               ]
[+] EMBL OSR29321A            [                                                         TACGCCTCGCTGCTGCGCGCCAGGGGGCTCCTGCACTCGGACCAGCAGCTG TTCGCCGGCGG GGCCTCGGCGCCACCGACGGGCTCGTCAGGTTCT ACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAAT                                                                                                                                                                                               ]
[+] EMBL C20500               [                                                                     cTGCGCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTGTTTCGCCGGCGGCGGCTTCGGCGCCACCGACGGGCTCGTCAGGTTTTAACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAGTGAATATTGTTTAAACGTTCTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATGAGTTCAAANAA]




>consensus_10554#1
AGGGCGAATTGGTACCGGCCCCCCCTTGGAGGTCGACCCANGGGTCCGGCCGCGTATTAC
GCTTCGCTGNTGCGCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTGTTCGCCGGCGGC
GGCTTCGGCGCCACCGACGGGCTCGTCAGGTTNTACGCCGCCAACCCGGACGCGTTCCGG
CGAGACTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAA
GGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACNNGAGATGGCC
TAAATTAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCT
CCTGTGGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAG
TGAAGTGAATATTGTTTAAACGTTNTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAG
TGATGAGTTCAAANAA

consensusID : consensus_10554#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 314
fasta sequence

                              [GGCCTCGGCGCCNCCGACGGGCTNGTCAGGTTTTACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTNGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGANCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTNCTAGCAAGAACGCGAGATGGCCTAAATTNAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTNTCCTGTGGATGAGAGTTNTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGNAAAAAAAAAAA]

[+] EMBL AU197614             [GGCCTCGGCGCCNCCGACGGGCTNGTCAGGTTTTACGCCGCCAACCCGGACGCGTTCCGGCGAGACTTNGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGANCCAAGGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTNCTAGCAAGAACGCGAGATGGCCTAAATTNAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTNTCCTGTGGATGAGAGTTNTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGNAAAAAAAAAAA]




>consensus_10554#2
GGCCTCGGCGCCNCCGACGGGCTNGTCAGGTTTTACGCCGCCAACCCGGACGCGTTCCGG
CGAGACTTNGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGANCCAA
GGCGAGGTCCGCGTCAACTGCAGGAAGGTGAACTACTNCTAGCAAGAACGCGAGATGGCC
TAAATTNAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTNT
CCTGTGGATGAGAGTTNTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAG
TGNAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      TTATGGCTTCACGTAGCCGAGTCGTCGAGTCAACTCGGTTGAGCTATATAAGCTCTCCAT 60
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      TTGCCTTGCTCTGCTTCCACGCACTCGATCGAGCTTAACTAATTAACCATCAGTAGCAAA 120
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      TTAAGCCTCGACCAGCTAATCAATTAATTGAGCTTGTGCTGTTAGCCGTGTCATCTATAG 180
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      CTCGCTAGCTTGCCATGGTGTCCTCTGCTATGGCGGCGGTGGCGGTGGCGTTTGCTGTAG 240
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      TGGTGGCCGCGACGATGAGCAGCGCGCAACTTGACCCGCACTTCTACGACGGCTTGTGCC 300
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      CGGCGGCGCTGCCCACCATCAAGCGGATCGTCGAGGAGGCCGTCGCGGCGGAGCCCCGCA 360
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      TGGGCGCCTCGCTCCTGCGCCTGCACTTCCACGACTGCTTCGTCAACGGTTGCGACGGGT 420
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      CCATCCTGCTGGACGACACGCCATTCTTCACGGGGGAGAAGAACGCGGCGCCCAACATGA 480
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      ACTCCGTCCGCGGCTTCGACGTCATCGACCGCATCAAGGACGCCGTCAACGCCGCCTGCC 540
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      ACCGACGGGCTCGTCAGGTTCTACGCCGCCAGGCGGCGGCGAACAGCAGCATCCCGGCGC 600
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      CGACGCTCAACCTCGACGGCCTCGTCTCCAGCTTCGCCGCGCAGGGCCTCTCCGTGCAGG 660
                                                                                   

consensus_10554#1      ------------------------------------------------------------
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      ACCTCGTCCTCCTCTCCGGCGCCCACACGCTGGGCTTCTCCCGCTGCACCAACTTCCGCG 720
                                                                                   

consensus_10554#1      ----------------------------------------------AGGGCGAATTGGTA 14
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      ACCGCCTCTACAACGAGACGGCCACGCTCGACGCCTCCCTCGCCGCGTCGCTCGGGGGGA 780
                                                                                   

consensus_10554#1      CCGGCCCCCCCTTGGAGGTCGACCCANGGGTCCGGC-CGCGTATTACGCTTCGCTGNTGC 73
consensus_10554#2      ------------------------------------------------------------
consensus_10554#0      CCTGCCCGCGTACCGCCGGCGCCGGCGACGACAACCTCGCGCCGCTCGACCCGACGCCGG 840
                                                                                   

consensus_10554#1      GCGCCAGGGGGNTCCTGCACTCGGACCAGCAGCTGTTCGCCGGCGGCGGCTTCGGCGCC- 132
consensus_10554#2      -----------------------------------------------GGCCTCGGCGCC- 12
consensus_10554#0      CGAGGTTCGACGCCGCGTACTACGCCTCGCTGCTGCGCGCCAGGG--GGCTCCTGCACTC 898
                                                                      ***  * ** *  

consensus_10554#1      --ACCGACGG--GCTCGTCAGGTTNTAC---GCCGCCAACCCGGACGCGTTCCGGCGAGA 185
consensus_10554#2      --NCCGACGG--GCTNGTCAGGTTTTAC---GCCGCCAACCCGGACGCGTTCCGGCGAGA 65
consensus_10554#0      GGACCAGCAGCTGTTCGCCGGCGGCGGCCTCGGCGCCAACCCGGACGCGTTCCGGCGAGA 958
                          **  * *  * * * * *      *   * ***************************

consensus_10554#1      CTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGA 245
consensus_10554#2      CTTNGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGANCCAAGGCGA 125
consensus_10554#0      CTTCGCCGAGTCCATGGTGAGGATGGCCAGCCTGAGCCCGCTCGTCGGGAGCCAAGGCGA 1018
                       *** ********************************************** *********

consensus_10554#1      GGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACNNGAGATGGCCTAAAT 305
consensus_10554#2      GGTCCGCGTCAACTGCAGGAAGGTGAACTACTNCTAGCAAGAACGCGAGATGGCCTAAAT 185
consensus_10554#0      GGTCCGCGTCAACTGCAGGAAGGTGAACTACTACTAGCAAGAACGCGAGATGGCCTAAAT 1078
                       ******************************** ***********  **************

consensus_10554#1      TAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGT 365
consensus_10554#2      TNAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTNTCCTGT 245
consensus_10554#0      TAAATGAGTTCCGAATGAATTAATAGTGCTTAAGTATGTTAATTAATTACCTTCTCCTGT 1138
                       * *************************************************** ******

consensus_10554#1      GGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAG 425
consensus_10554#2      GGATGAGAGTTNTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGNAA 305
consensus_10554#0      GGATGAGAGTTCTTCATTGTGGTTTAATTAGCTCATTTAATTCAGTTTGTGTGAGTGAAG 1198
                       *********** ********************************************* * 

consensus_10554#1      TGAATATTGTTTAAACGTTNTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATG 485
consensus_10554#2      AAAAAAAAA--------------------------------------------------- 314
consensus_10554#0      TGAATATTGTTTAAACGTTCTGGTGTTCTTTGATTTTCATTTCCTCTTGTAATAGTGATG 1258
                         ** *                                                      

consensus_10554#1      AGTTCAAANAA---------- 496
consensus_10554#2      ---------------------
consensus_10554#0      AGTTCAAAAGTTAAATGCACT 1279