cluster # 10564

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Oryza sativa
cluster # 10564 cluster # 10564 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10564#0 length = 2077 sequences # 7
consensusID : consensus_10564#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2077
fasta sequence
                              [CTCATAGTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC-AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCTTATGCCTGCGAGTTCTTGGGTGCAGGAGGAGTTGTTAGTTGTTACCTTTGTCTCCTTCGTTGATCCATTGAAAGAGGCAGTGGCTGTTTGCTCTTTGATCTGCATGTCCTTTGGCCTTCACCGACGACGAGATGGGCTCTGCTCCGTTCGGTGACGCCGTCGCCGGCGGTGGGCTCTATGAGTACCAGGGGTATCACGGTGGCTTCGCCGGCGGCCATGGTCTCGGCCAACCGGCCGGCCGAGCGCCCGCGTTGGACGACGGTGAAACTGAGGGGATGGACGCATCCGCCGCCGCCGCAGTCGCCGCCATGGAGATGGCAAAGAGGAATTGTGGAGGCGGCCGGGAGGAGAAGGCGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGCTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACATTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATTACCTTGCATTTGACATATATATATTTGACATTTTCACATTTCACTGCAACTTCAGTTTAACTAGTAACTAGGAGCTTTGCTCCTTCATGC]

[+] EMBL CB646427             [CTCATAGTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK068593             [      GTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAAATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCTTATGCCTGCGAGTTCTTGGGTGCAGGAGGAGTTGTTAGTTGTTACCTTTGTCTCCTTCGTTGATCCATTGAAAGAGGCAGTGGCTGTTTGCTCTTTGATCTGCATGTCCTTTGGCCTTCACCGACGACGAGATGGGCTCTGCTCCGTTCGGTGACGCCGTCGCCGGCGGTGGGCTCTATGAGTACCAGGGGTATCACGGTGGCTTCGCCGGCGGCCATGGTCTCGGCCAACCGGCCGGCCGAGCGCCCGCGTTGGACGACGGTGAAACTGAGGGGATGGACGCATCCGCCGCCGCCGCAGTCGCCGCCATGGAGATGGCAAAGAGGAATTGTGGAGGCGGCCGGGAGGAGAAGGCGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGCTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAGGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACATTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATTACCTTGCATTTGACATATATATATTTGACATTTTCACATTTCACTGCAACTTCAGTTTAACTAGTAACTAGGAGCTTTGCTCCTTCATGC]
[+] EMBL AU063360             [          ttTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGNCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGNACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTCAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU063369             [          tntnCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGG TCCCCTTCTGGTCGTG CCGCCGAATCGGCCGNCGGGCAACTGACCTGACCTGACCTCTCTTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB645941             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGNTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAG                                                                                                                                                                             ]
[-] EMBL CB619442             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACAGTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATAACCTTGCATTTGACATATATATAT                                                                  ]
[+] EMBL AU093310             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCNTCNTNAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCNGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_10564#0
CTCATAGTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCT
GCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTG
CACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAG
CAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCG
GTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAG
TCGGAGCAGAGGAAGCTACGGCGTGTCAGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGG
CCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCT
CTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACAC
GGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCG
TCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGA
AGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGT
CTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTT
TCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAG
GTGTTCTTGATCTTGGAGCTTATGCCTGCGAGTTCTTGGGTGCAGGAGGAGTTGTTAGTT
GTTACCTTTGTCTCCTTCGTTGATCCATTGAAAGAGGCAGTGGCTGTTTGCTCTTTGATC
TGCATGTCCTTTGGCCTTCACCGACGACGAGATGGGCTCTGCTCCGTTCGGTGACGCCGT
CGCCGGCGGTGGGCTCTATGAGTACCAGGGGTATCACGGTGGCTTCGCCGGCGGCCATGG
TCTCGGCCAACCGGCCGGCCGAGCGCCCGCGTTGGACGACGGTGAAACTGAGGGGATGGA
CGCATCCGCCGCCGCCGCAGTCGCCGCCATGGAGATGGCAAAGAGGAATTGTGGAGGCGG
CCGGGAGGAGAAGGCGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCG
GGAGAGGATCAACGCCCACCTCGCCACGCTCCGCACCATGGTGCCCTGCACCGACAAGAT
GGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGC
GGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGA
AGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTG
CGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGA
GGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTC
GTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCA
GTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCT
GGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGT
TTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCT
GATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTT
TAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACATTG
GTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATG
ATTAATTACCTTGCATTTGACATATATATATTTGACATTTTCACATTTCACTGCAACTTC
AGTTTAACTAGTAACTAGGAGCTTTGCTCCTTCATGC
clustalw multiple alignements is not computed in this case