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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10736#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2613 fasta sequence
[AAAAAAAAAAAACTATTGCGTTACGTCCAACTCCCCCGGCGACGGTGGAAGCGGGAGCAGCCCGACGTCCTCGTCCGACTCCCCGGCGACGGTGGAAGCGGGAGCAGCAGCAGCCCGGCGTTGCTTCCGGCGGCATTACCTCCTCGTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCGGCGGCCGCGACGGGCATCGACCACTGGGAGTTCGCCTGCAGCTTGAGCAGGACCTTGTCCTGCGCCACGTGGAAGAGCGCTCCCACCTCCGCCCCGTCGCCGCCGCCGCTCGTCGTGGTGGGTAGGGGATTCACTGATTTGCTGCACTCTGTTTGCTCGGGGGATCGAGAGGGATAGGAGGAAGAGGAGTGGAGAGGAAGAAGGTAGAAGATGAGGGACAATTTGGTCCATAAAGATAGAAGATAAAAGGAATTTCGTCGAAGTAAAGCCCTCGCACCAACTTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC-CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGGTTGTTGTACCAGTTT-GTTTTGTTTG-ACACTCAAGTGTNGTTTAGATCACGGGGTGTAAGGTTTGGACGTATCACATCGGGTATTATATAGGATGTCGTATGGGGTGTTCGAACACAAGGAAAAAAAGTAACTACAGAATCTGTCAGTAAAAAAAAAA]
[+] EMBL AK073990 [AAAAAAAAAAAACTATTGCGTTACGTCCAACTCCCCCGGCGACGGTGGAAGCGGGAGCAGCCCGACGTCCTCGTCCGACTCCCCGGCGACGGTGGAAGCGGGAGCAGCAGCAGCCCGGCGTTGCTTCCGGCGGCATTACCTCCTCGTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCGGCGGCCGCGACGGGCATCGACCACTGGGAGTTCGCCTGCAGCTTGAGCAGGACCTTGTCCTGCGCCACGTGGAAGAGCGCTCCCACCTCCGCCCCGTCGCCGCCGCCGCTCGTCGTGGTGGGTAGGGGATTCACTGATTTGCTGCACTCTGTTTGCTCGGGGGATCGAGAGGGATAGGAGGAAGAGGAGTGGAGAGGAAGAAGGTAGAAGATGAGGGACAATTTGGTCCATAAAGATAGAAGATAAAAGGAATTTCGTCGAAGTAAAGCCCTCGCACCAACTTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCTAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGG ]
[+] EMBL CB626667 [ CCTCCTCCTCCTCGTCCGACTCCCTGCCGAGATCCCGGCCTTTCCGTCCCGACCGCACCGGCGGCGGCGGCGGAGCATCGGGCCCCTTCGGCTTCAGATCCGGCGGACGAGGTCGCGGTCGAGGGGATCTACTGCGGCGGTGGGGTCGAGCGAGGGACCG ]
[+] EMBL AK120129 [ TTAGCCATCGTCGCCTTCCCGTAGGCCGGCCGGCCGGCGACCACCGCCTTCCGAAACCGATGGCTGCAGAGACGCGTCCTAGCCGCTACCGTCGGCTTCGGAAGGCCTCGGATCTCTCTACCGCCACCACCGCTTCCCCACTCTCCAAACGGATTTGTATGGGCAAGAAATGCACCAGTTATGAGGACAGGATCAGCAGCTTACCTGAAGAGATACTACTCATGATCCTTGGCAAGCTAGACACACGGACGACAGTAACAACCACCATCCTTTCAAAGAGATGGCGTGATCTTCCTCGATGTTTGCCCACATCCTATAACCTTGCTGTCGATGACATCCTCCCACCACGGTATCACCGCCTCAAACGCCTTAACATGGAGGCTAAGGCGGCCTATGAAACAGAGAAGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAATAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCG ]
[+] EMBL CB653350 [ AGATTGTACACAAACTGACCGACATCTATGCCATCAAGGCTCGGCATGAGCGTTGGATGACCACTATCAGACCACTCACGGCCATCCTAGAACGCTACGAGCGCCGGGCCATGAGACGCTATGTCAAGCAGGTGAATGCATTTCTTCTAGCTCCAAAGAATGTGCGTCAACGCTGGCCTGTCCAGAAGCTGAGGCTCCAAACGCTAGGGCGTTGGCATGAGAATATTGATGAATGGATCACCACAGCCATTGCCAAGTGGGGTGTCGAGGATTTTGAGCTTGTTGTCGATGGCTTTTGCCTGGGCTATGACCTCAAGCAGCTGGATACATACCGGAGCTTGCGGCTGGAGCGGCTTGCGTTGTCCAATTGCGAGGCTGTTTGTGCATGGAACTGCTTGACAGTAAAGAGGCTCACCAAACTCTCATTGAGTGAAGGTTCATTTATGGGATTGCTCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCANGCATGTGAGG ]
[+] EMBL CF325582 [ TCAATGATATCCTTGCAAACTGCGTGCAGCTAACAGATTTCAGGGTCGCATTTTCAAGTTATTACCGAGCCAAAGTCCGTATCTATGCCCCATCATCGAAATTAAAGAATCTGCAAGTGGACAGGTGCAACTTTGGGAAAATCTATCTGATATGTCTGCCTTGTCTTGAAACTTTTGTTTGCCGCGGTCGCCCGACCAAGTTATCCTATGGTGAGGTGCCTCAGCTCAGGCATGTGAGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAAAAGACAGAACTGCAGGTGATCTC ]
[-] EMBL CB626668 [ AGGTTGGACTACATTCAAACTGAAGATAACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTGCAAAACNCGTGTCTTATAGTAGACATTTTGGAA ]
[+] EMBL CA756946 [ AACGACATAGATGATGAATCTGGTACTAAGAGGACATATCCACCGAGCAAATTCTTCAAAAAGATCCCAAAACTAGATTCCCTTGTTCTTCAGTTCAAAGGGACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAAT ATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTNCGGTTCCATGTCTGTTCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGTTTGTTGTACCAGTTTGGTTTTGTTTG ACACTCAAGTGTNGTTTAGATCACGGGGTGTAAGGTTTG ]
[-] EMBL CB644238 [ GACACAGATGTGGATCGAACCATTTGTTGTTCTCAGTGAGTTCAGTCAGCTCAAGAAGCTCTTCATCGCAAATGTCCCAGTGAACTGGGATATACTGTGGATTCTCCTACTGCTCGATGCAACGCCAGCCTTGGAGTCATTACATGTTCATATTGACAACAACTCAGAAGACAGAACTGCAGGTGATCTCTGCGCCAGCCTCGACGTCGGTGTGCAGCAGGATCGATACCGTCACCTGAAGGAGCTCGTCGTGGCCGGCTTCGACGGACTGGGCTGGCAAGCTGGCTTTGTCAGGCTGATAATGAAGAGGTCGCCGTTGCTGAGACGCGTTCACCTGCTTGACGGGGAGGTCAGGGATGACGAGGGGGAGCTGGGGGATCTGCAGATCGTCCCACGCCACCGGGAGTGGCACGAGTGTGAGCGAGCTGAGGTGCTCGATGACCTCACCACTGGGTTTCGCTGGCCTCCTCAAATAATTCTGGAATAAGCGTGTCCTTTCAGTTAACTTGTTTAGATTAGGAAAATAATAATAATATGTGTGCCTTGTGACTTTGCTTGACGATGCAAATGACGCAGAGCTGAAGTGCTCCGGTTCCATGTCTGTCCCTTTACAAAAC CGTGTCTTATAGTAGACATTTTGGAAGAACCAGTGCGGTTGTTGTACCAGTTT GTTTTGTTTGAACACTCAGGGGTTGTTTAGATTGAGGGGTGTAAAGTTTTGACGTATCACATCGGGTATTATATAGGATGTCGTATGGGGTGTTCGAACACAAGGAAAAAAAGTAACTACAGAATCTGTCAGTAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||