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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10742#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3354 fasta sequence
[ACCAATCACCCTTGAGCTCCCACTCACCTTCAGTTCCATTGGCGCTGAAAAACATAAACAGGCATGAATGCTCTAGTGATCTTGCTATGCTCCACGTTGCTTTTGTATTCCCCTGCGGCGGTATGCACGGTAGGGAGCAGCAGCAGCAGCACAAACGCCACCGACAAGCAGGCAGCCGCGCTGCTCTCCTTCAGGTCCATGGTGTCCGACCCATCCGGCGCGCTCACCTGGTGGAACGCCTCCAACCACCCGTGCAGGTGGCGTGGCGTCGCGTGCGGCCGCGGCCGGCACGCGGGCAGCGTCGTCGCGCTAAGCCTCGGCTCCTCGTCGTTGTCCGGGCTCATCTCGCCGTTCTTGGGTAACCTCTCGTTCCTGCGTGTGCTAGACCTTGGGGCGAACCAGCTGGTTGGCCAGATTCCTCCCGAGCTGGGGCGTCTCGGTAGGCTCCGAGAGCTTAACCTTTCTGGCAACTCGCTAGAAGGGGGCATCCCACCGGCGTTGGCGATAGGATGTAGCAAGCTCGAGAGCCTTAGCCTGGACTCCAACCACCTCCGTGGTGAGATCCCGGGTGAGATCGCCGCGTTGAGGAATCTAGCGTACTTGAATCTTCGTGCAAATAATCTGTCGGGAGAGATCCCGCCATCCCTGGGTAACTTGTCATCACTTTACTTCTTGAATCTAGGGTTCAACATGCTATTTGGTGAGATTCCAGCTTCCTTGGGCAATCTTTCCCAGCTCAATGCTCTTGG-TATTCAACATAACCAATTATCTGGTGGCATACCTTCTTCTCTTGGTCACTTGAACAACCTTACCAGTCTTCTCCTACAAGCTAACGGTCTGATAGGGTCCATTCCTCCTAATATTTGTAACATATCATTCCTAAAACATTTTTCTGTAGAAAACAATGAGCTCAGTGGGATGCTACCACCGAACGTGTTCAACACACTTCCTATGCTCGAGACTTTCGATGCGGGGGAGAATATGTTTGATGGCCATATCCCATCATCACTGGTTAATGCCTCCAAACTCTCTAGATTTCAGATCGCGGAAAACCACTTCAGTGGTGTAATTCCTCCAGAGTTAGGAGGGTTACAGGGTCTCAAGTGGTTTATTCTCACTGAAAATGATCTTGAATCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGTCTACGTTTCTCCTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACAACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAAGTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAAATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCATTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTCTCTAGTAACAATTTTTCA-GGCCAAATACCAAAGTTCTTTGGACACTTCCTCACACTCTATGATTTAAACCTCTCTTACAATAACTTTGACGGTGAAGTGCCAGTGTTTGGTGTTTTTGCAAATGCTACTGGCATTTCGGTCCAAGGGAACAACAAGCTTTGTGGGGGCATTCCAGATCTTCACTTGCCTACATGTTCTCTTAAGATTTCCAAGAGAAGGCATAGAGTTCCAGGGTTGGCGATTGTTGTTCCCCTTGTTGCTACAACAATATGTATCCTTTCATTGCTCCTTTTCTTCCATGCTTGGTATAAGAACAGATTAACAAAAAGTCCTTCAACAATGTCCATGCGAGCCCATCAACTTGTCTCCTACCAGCAGTTGGTACATGCAACAGATGGCTTCTCGACGACCAATTTGTTGGGTACTGGGAGCTATGGATCAGTCTATAGAGGTAAATTGTTCGATGAAACTGGTGAGAATGAAAATCTTATCGCTGTAAAAGTATTGAAACTTCAGACACCTGGGGCTCTTAAGAGTTTCACGGCGGAATGTGAAGCGATGAAGAACTTAAGACACCGGAACCTTGTTAAGATAGTTACAGCATGCTCAAGCATGGACTTCAATGGAAACGACTTCAAAGCAATTGTGTTCGACTTCATGCCCAATGGTTGCCTAGAAGAGTGGCTCCATCCTCAGATAGATAACCAATTGGAAGAGAGGCACTTGAATCTTGTCCACAGAGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGATACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCCACCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAATTCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATTTAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGTAGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGAAAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCCATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACTCGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGGCTTTTGAGAAGCAAAACATGCCAAATTATGTGCTCTTTTTTATTATTCCTGATGTATGTGCGATTCTCTTTAATTTCTAAGACAAACTCATGAATGCATGGGTTTCAAAGAACAAAAGAATTGTACTGGTGTAATATGCGATATA-GATTTTCTGGATCACGGTGAAAAGATGTTGCCGCTGATACTCTCTTTTTCCTGATTGAATATTTGTAAAGCTACAGTACCTGTTTGAGTAAACAAGCTGAACTTCA]
[+] EMBL AK111694 [ACCAATCACCCTTGAGCTCCCACTCACCTTCAGTTCCATTGGCGCTGAAAAACATAAACAGGCATGAATGCTCTAGTGATCTTGCTATGCTCCACGTTGCTTTTGTATTCCCCTGCGGCGGTATGCACGGTAGGGAGCAGCAGCAGCAGCACAAACGCCACCGACAAGCAGGCAGCCGCGCTGCTCTCCTTCAGGTCCATGGTGTCCGACCCATCCGGCGCGCTCACCTGGTGGAACGCCTCCAACCACCCGTGCAGGTGGCGTGGCGTCGCGTGCGGCCGCGGCCGGCACGCGGGCAGCGTCGTCGCGCTAAGCCTCGGCTCCTCGTCGTTGTCCGGGCTCATCTCGCCGTTCTTGGGTAACCTCTCGTTCCTGCGTGTGCTAGACCTTGGGGCGAACCAGCTGGTTGGCCAGATTCCTCCCGAGCTGGGGCGTCTCGGTAGGCTCCGAGAGCTTAACCTTTCTGGCAACTCGCTAGAAGGGGGCATCCCACCGGCGTTGGCGATAGGATGTAGCAAGCTCGAGAGCCTTAGCCTGGACTCCAACCACCTCCGTGGTGAGATCCCGGGTGAGATCGCCGCGTTGAGGAATCTAGCGTACTTGAATCTTCGTGCAAATAATCTGTCGGGAGAGATCCCGCCATCCCTGGGTAACTTGTCATCACTTTACTTCTTGAATCTAGGGTTCAACATGCTATTTGGTGAGATTCCAGCTTCCTTGGGCAATCTTTCCCAGCTCAATGCTCTTGG TATTCAACATAACCAATTATCTGGTGGCATACCTTCTTCTCTTGGTCACTTGAACAACCTTACCAGTCTTCTCCTACAAGCTAACGGTCTGATAGGGTCCATTCCTCCTAATATTTGTAACATATCATTCCTAAAACATTTTTCTGTAGAAAACAATGAGCTCAGTGGGATGCTACCACCGAACGTGTTCAACACACTTCCTATGCTCGAGACTTTCGATGCGGGGGAGAATATGTTTGATGGCCATATCCCATCATCACTGGTTAATGCCTCCAAACTCTCTAGATTTCAGATCGCGGAAAACCACTTCAGTGGTGTAATTCCTCCAGAGTTAGGAGGGTTACAGGGTCTCAAGTGGTTTATTCTCACTGAAAATGATCTTGAAGCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGTCTACGTTTCTCGTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACAACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAAGTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAAATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCATTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTCTCTAGTAACAATTTTTCA GGCCAAATACCAAAGTTCTTTGGACACTTCCTCACACTCTATGATTTAAACCTCTCTTACAATAACTTTGACGGTGAAGTGCCAGTGTTTGGTGTTTTTGCAAATGCTACTGGCATTTCGGTCCAAGGGAACAACAAGCTTTGTGGGGGCATTCCAGATCTTCACTTGCCTACATGTTCTCTTAAGATTTCCAAGAGAAGGCATAGAGTTCCAGGGTTGGCGATTGTTGTTCCCCTTGTTGCTACAACAATATGTATCCTTTCATTGCTCCTTTTCTTCCATGCTTGGTATAAGAACAGATTAACAAAAAGTCCTTCAACAATGTCCATGCGAGCCCATCAACTTGTCTCCTACCAGCAGTTGGTACATGCAACAGATGGCTTCTCGACGACCAATTTGTTGGGTACTGGGAGCTATGGATCAGTCTATAGAGGTAAATTGTTCGATGAAACTGGTGAGAATGAAAATCTTATCGCTGTAAAAGTATTGAAACTTCAGACACCTGGGGCTCTTAAGAGTTTCACGGCGGAATGTGAAGCGATGAAGAACTTAAGACACCGGAACCTTGTTAAGATAGTTACAGCATGCTCAAGCATGGACTTCAATGGAAACGACTTCAAAGCAATTGTGTTCGACTTCATGCCCAATGGTTGCCTAGAAGAGTGGCTCCATCCTCAGATAGATAACCAATTGGAAGAGAGGCACTTGAATCTTGTCCACAGAGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGATACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCCACCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAATTCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATTTAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGTAGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGAAAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCCATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACTCGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGGCTTTTGAGAAGCAAAACATGCCAAATTATGTGCTCTTTTTTATTATTCCTGATGTATGTGCGATTCTCTTTAATTTCTAAGACAAACTCATGAATGCATGGGTTTCAAAGAACAAAAGAATTGTACTGGTGTAATATGCGATATA GATTTTCTGGATCACGGTGAAAAGATGTTGCCGCTGATACTCTCTTTTTCCTGATTGAATATTTGTAAAGCTACAGTACCTGTTTGAGTAAACAAGCTGAACTTCA]
[+] EMBL CB638589 [ CACCGACAAGCAGGCAGCCGCGCTGCTCTCCTTCAGGTCCATGGTGTCCGACCCATCCGGCGCGCTCACCTGGTGGAACGCCTCCAACCACCCGTGCAGGTGGCGTGGCGTCGCGTGCGGCCGCGGCCGGCACGCGGGCAGCGTCGTCGCGCTAAGCCTCGGCTCCTCGTCGTTGTCCGGGCTCATCTCGCCGTTCTTGGGTAACCTCTCGTTCCTGCGTGTGCTAGACCTTGGGGCGAACCAGCTGGTTGGCCAGATTCCTCCCGAGCTGGGGCGTCTCGGTAGGCTCCGAGAGCTTAACCTTTCTGGCAACTCGCTAGAAGGGGGCATCCCACCGGCGTTGGCGATAGGATGTAGCAAGCTCGAGAGCCTTAGCCTGGACTCCAACCACCTCCGTGGTGAGATCCCGGGTGAGATCGCCGCGTTGAGGAATCTAGCGTACTTGAATCTTCGTGCAAATAATCTGTCGGGAGAGATCCCGCCATCCCTGGGTA ]
[+] EMBL CB671735 [ TCTTGGCTATTCAACATAACCAATTATCTGGTGGCATACCTTCTTCTCTTGGTCACTTGAACAACCTTACCAGTCTTCTCCTACAAGCTAACGGTCTGATAGGGTCCATTCCTCCTAATATTTGTAACATATCATTCCTAAAACATTTTTCTGTAGAAAACAATGAGCTCAGTGGGATGCTACCACCGAACGTGTTCAACACACTTCCTATGCTCGAGACTTTCGATGCGGGGGAGAATATGTTTGATGGCCATATCCCATCATCACTGGTTAATGCCTCCAAACTCTCTAGATTTCAGATCGCGGAAAACCACTTCAGTGGTGTAATTCCTCCAGAGTTAGGAGGGTTACAGGGTCTCAAGTGGTTTATTCTCACTGAAAATGATCTTGAAGCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAAATATTTTAGTGGTAGCAT ]
[+] EMBL CB635376 [ TCTTCCATCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGTCTACGTTTCTCCTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACAACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAAGTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAAATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCATTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTCTCTAGTAACAATTTTTCANGGCC AATACCAAAGTTCTTTGGACACTTCCTCA ]
[+] EMBL CB635469 [ TCTTCAATCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGTCTACGTTTCTCCTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACAACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAAGTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAAATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCATTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTCTCTAGTAACAATTTTTCA GGCCAAATACCAAAGTTCTTTGGACACTTCCTCACACTCTATGATTTA ]
[+] EMBL CB635444 [ TCTTGCCTCCAAAGAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTGGAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCATCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATTGGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCACCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTTAGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGAAGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGTCTACGTTTCTCCTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACAACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAAGTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAAATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCATTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTCTCTAGTAACAATTTTTCA GGCCAAATACCAAAGTTCTTTGGACACTTCCTCACACTCTATGATTTAAACCTCTCTTACAAT ]
[-] EMBL CB638590 [ GAGCAAGGATTTAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAACAATCGAGCGATGGACATTCTCGATGTAGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGAAAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCCATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACTCGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGGCTTTTGAGAAGCAAAACATGCCAAATTATGTGCTCTTTTTTATTATTCCTGATGTATGTGCGATTCTCTTTAATTTCTAAGACAAACTCATGAATGCATGGGTTTCAAAGAACAAAAGAATTGTACTGGTGTAATATGCGATAGAGGTTTTTCTGGATCc ]
consensusID : consensus_10742#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[GGCACTACACCTGTGGTGCACTGCGATCTTAAACCAAGTAATGTGCTTCTTGATGCTGATATGGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGATACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCCCCCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAATTCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATTTAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGTAGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGAAAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCCATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACTCGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGCCTTTTTAAAACCAAAACAT]
[-] EMBL CB671736 [GGCACTACACCTGTGGTGCACTGCGATCTTAAACCAAGTAATGTGCTTCTTGATGCTGATATGGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGATACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCCCCCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAATTCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATTTAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGTAGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGAAAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCCATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACTCGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGCCTTTTTAAAACCAAAACAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10742#0 ACCAATCACCCTTGAGCTCCCACTCACCTTCAGTTCCATTGGCGCTGAAAAACATAAACA 60
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GGCATGAATGCTCTAGTGATCTTGCTATGCTCCACGTTGCTTTTGTATTCCCCTGCGGCG 120
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GTATGCACGGTAGGGAGCAGCAGCAGCAGCACAAACGCCACCGACAAGCAGGCAGCCGCG 180
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CTGCTCTCCTTCAGGTCCATGGTGTCCGACCCATCCGGCGCGCTCACCTGGTGGAACGCC 240
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCCAACCACCCGTGCAGGTGGCGTGGCGTCGCGTGCGGCCGCGGCCGGCACGCGGGCAGC 300
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GTCGTCGCGCTAAGCCTCGGCTCCTCGTCGTTGTCCGGGCTCATCTCGCCGTTCTTGGGT 360
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 AACCTCTCGTTCCTGCGTGTGCTAGACCTTGGGGCGAACCAGCTGGTTGGCCAGATTCCT 420
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CCCGAGCTGGGGCGTCTCGGTAGGCTCCGAGAGCTTAACCTTTCTGGCAACTCGCTAGAA 480
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GGGGGCATCCCACCGGCGTTGGCGATAGGATGTAGCAAGCTCGAGAGCCTTAGCCTGGAC 540
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCCAACCACCTCCGTGGTGAGATCCCGGGTGAGATCGCCGCGTTGAGGAATCTAGCGTAC 600
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TTGAATCTTCGTGCAAATAATCTGTCGGGAGAGATCCCGCCATCCCTGGGTAACTTGTCA 660
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCACTTTACTTCTTGAATCTAGGGTTCAACATGCTATTTGGTGAGATTCCAGCTTCCTTG 720
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GGCAATCTTTCCCAGCTCAATGCTCTTGGTATTCAACATAACCAATTATCTGGTGGCATA 780
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CCTTCTTCTCTTGGTCACTTGAACAACCTTACCAGTCTTCTCCTACAAGCTAACGGTCTG 840
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ATAGGGTCCATTCCTCCTAATATTTGTAACATATCATTCCTAAAACATTTTTCTGTAGAA 900
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 AACAATGAGCTCAGTGGGATGCTACCACCGAACGTGTTCAACACACTTCCTATGCTCGAG 960
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ACTTTCGATGCGGGGGAGAATATGTTTGATGGCCATATCCCATCATCACTGGTTAATGCC 1020
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCCAAACTCTCTAGATTTCAGATCGCGGAAAACCACTTCAGTGGTGTAATTCCTCCAGAG 1080
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TTAGGAGGGTTACAGGGTCTCAAGTGGTTTATTCTCACTGAAAATGATCTTGAATCCAAA 1140
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GAATCTAACGACTGGAAGTTTATGAAAGCATTAACAAATTGCTCCCAATTAGAAGTTTTG 1200
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GAATTGGAAGCCAATAAGTTTAGTGGAACTCTTCCATCCGTAATTTCCAACTTATCCGCA 1260
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCACTAACAATCCTCACTCTAGCTAGCAACAAAATTGTAGGGAACATGCCTAGAGAAATT 1320
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GGCAAACTAATCAATTTAGGTGCACTTGTCGCACATAACAATTTTCTGACTGGAAGTCCA 1380
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CCGTCATCATTAGGTATGCTTCAAAACCTAAGAATTTTGTGGCTAGATAACAATTACTTT 1440
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 AGTGGGCCATTCCCTCGTGTTATATGCAATTTAACTCATATGGACTCTTTAGACCTTGGA 1500
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 AGGAATAATTTTAGTGGTAGCATCCCAATAACAGTGGGAAACATGGTTTCACTGTCGAGT 1560
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CTACGTTTCTCCTTTAATAACTTTATAGGTACCATCCCAACTAGTTTATTCAACATCACA 1620
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ACACTCTCAATATATTTGGATATCTCCTACAATCACTTAGACGGGTCAATACCACCTGAA 1680
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GTTGGGAATCTACCGAATCTTGTATACCTTGATGCCCGGTATAATCAATTATCAGGGGAA 1740
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ATTCCTATTACTTTCGAAAAATGCCAGCTTCTCCAGATTTTGTATCTGCAAAACAATTCA 1800
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TTTATTGGTAATATCCCATCATCCTTTAGTGAGATGAAGGGTTTAGAAATTCTCGACCTC 1860
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCTAGTAACAATTTTTCAGGCCAAATACCAAAGTTCTTTGGACACTTCCTCACACTCTAT 1920
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GATTTAAACCTCTCTTACAATAACTTTGACGGTGAAGTGCCAGTGTTTGGTGTTTTTGCA 1980
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 AATGCTACTGGCATTTCGGTCCAAGGGAACAACAAGCTTTGTGGGGGCATTCCAGATCTT 2040
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CACTTGCCTACATGTTCTCTTAAGATTTCCAAGAGAAGGCATAGAGTTCCAGGGTTGGCG 2100
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ATTGTTGTTCCCCTTGTTGCTACAACAATATGTATCCTTTCATTGCTCCTTTTCTTCCAT 2160
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GCTTGGTATAAGAACAGATTAACAAAAAGTCCTTCAACAATGTCCATGCGAGCCCATCAA 2220
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CTTGTCTCCTACCAGCAGTTGGTACATGCAACAGATGGCTTCTCGACGACCAATTTGTTG 2280
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GGTACTGGGAGCTATGGATCAGTCTATAGAGGTAAATTGTTCGATGAAACTGGTGAGAAT 2340
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GAAAATCTTATCGCTGTAAAAGTATTGAAACTTCAGACACCTGGGGCTCTTAAGAGTTTC 2400
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ACGGCGGAATGTGAAGCGATGAAGAACTTAAGACACCGGAACCTTGTTAAGATAGTTACA 2460
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 GCATGCTCAAGCATGGACTTCAATGGAAACGACTTCAAAGCAATTGTGTTCGACTTCATG 2520
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 CCCAATGGTTGCCTAGAAGAGTGGCTCCAT-CCTCAGATAGATAACCAATTGGAAGAGAG 2579
consensus_10742#1 ----------------------GGCACTACACCTGTGGTGCACTGCGATCTTAAACCAAG 38
*** * * *** * * * * * * ** **
consensus_10742#0 GCACTTGAATCTTG---TCCACAGAGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGAT 2636
consensus_10742#1 TAATGTGCTTCTTGATGCTGATATGGTAGCACATGTTGGAGATTTTGGGCTAGCCAAGAT 98
* ** ***** * * ***********************************
consensus_10742#0 ACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCC 2696
consensus_10742#1 ACTGTCTTCTCAACCCTCAACGAGCTCGATGGGATTTAGAGGGACAATTGGTTATGCTCC 158
************************************************************
consensus_10742#0 ACCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAAT 2756
consensus_10742#1 CCCTGAATATGGTGCTGGAAATATGGTTTCAACTCACGGAGACATCTATAGCTATGGAAT 218
***********************************************************
consensus_10742#0 TCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATT 2816
consensus_10742#1 TCTTGTTCTTGAAATGATTACTGGAAGGCGGCCTACAGATAACACATGTGAGCAAGGATT 278
************************************************************
consensus_10742#0 TAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGT 2876
consensus_10742#1 TAGCCTTCGCAAGTGCGTTGAGATGGCCCTGAATAATCGAGCGATGGACATTCTCGATGT 338
************************************************************
consensus_10742#0 AGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGA 2936
consensus_10742#1 AGAGCTGGTAACAGAGCTTGAAAACGCGCCGCCTGCAACATCCATGGATGGTCCGTCAGA 398
************************************************************
consensus_10742#0 AAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCC 2996
consensus_10742#1 AAGGGTGAACTCCCTGATTTCGCTACTTAAACTCGGGCTGCTCTGCTCTGGGGAAATGCC 458
************************************************************
consensus_10742#0 ATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACT 3056
consensus_10742#1 ATTGAGTAGAATGTCAACCAAAGATATCATCAAGGAGCTGCTTGTAATCAAAAGGGCACT 518
************************************************************
consensus_10742#0 CGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGGCTTTTGAGAAGCA 3116
consensus_10742#1 CGCTTAAGAAAGCTTTTTTTTAAGAGGAAGGTCACAACTTAAGAAGCCTTTTTAAAACCA 578
********************************************** ***** * ** **
consensus_10742#0 AAACATGCCAAATTATGTGCTCTTTTTTATTATTCCTGATGTATGTGCGATTCTCTTTAA 3176
consensus_10742#1 AAACAT------------------------------------------------------ 584
******
consensus_10742#0 TTTCTAAGACAAACTCATGAATGCATGGGTTTCAAAGAACAAAAGAATTGTACTGGTGTA 3236
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 ATATGCGATATAGATTTTCTGGATCACGGTGAAAAGATGTTGCCGCTGATACTCTCTTTT 3296
consensus_10742#1 ------------------------------------------------------------
consensus_10742#0 TCCTGATTGAATATTTGTAAAGCTACAGTACCTGTTTGAGTAAACAAGCTGAACTTCA 3354
consensus_10742#1 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||