cluster # 10941

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Oryza sativa
cluster # 10941 cluster # 10941 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10941#0 length = 584 sequences # 8
consensusID : consensus_10941#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 584
fasta sequence
                              [GATACGCTACGTAACGACATGACAGTG--TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC--AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAACCTGACAGCGTCTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACG]

[+] EMBL CF291484             [GATACGCTACGTAACGACATGACAGTG  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACA AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAACCTGACAGCGTCTGGATGATGGTGTTGTGC                                                                                                                                                             ]
[+] EMBL CF333673             [             ACGGCATGATAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTCTTTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC  AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAAATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGC                                                             ]
[+] EMBL CF335630             [                          t  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATTCTCCAC  AAAAAAAAAAGAAGAAACAAGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAACCTGAACTCATAAAGCTCCTTGAAATGCCCTGGCCCTGATGAAATCGATCACACCCTCAACCTGACAGCGTTTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAG                                                                                         ]
[+] EMBL CF302286             [                                           TTTTTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTTTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAAAGAAGAACCCGGAAGAGAACTTTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCA                                                                                                                                                                                                                                             ]
[+] EMBL CF302368             [                                              TTTTTTTTTTTTTTTTAGCTAAAACACTGCTGCTACCGTGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTCTTTCTCCTCCCCCCAATTAATTAACATCTTATACATGCATACTCCAC  AAAAAAA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF301447             [                                                  TTTTTTTTTTTTACCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAATTACCACAATACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTCTTTTTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTC  C  AAAAAAAAAAGAAGAAACAGGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGC                                                                                                                                                                                                                           ]
[+] EMBL CF300777             [                                                        TTTTTTAGCTAGAACACTGCTGCTACCATGAGATAGTTTATCCCCCTGTAGTACTGTACATCAGAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAGATCCATGCATGCAGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTCTCTCTCTCTCCTCCCCCCAATTCATTAACATCTTATACATGCATACTCCAC   AAAAAAAAAGAAGAAACAAGAAGAGAACATCTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGCCCTGGCCCTGATGAAATCGATCACACGCTCAGCCTGACAGCGTCTGGATGATGGTGTTGTGCCACGGGTCAAACAGGTGCTGCAGCAGGTTGTCGAAGGGCCCCTTCTGCGTCACGTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGGGTTCTTGATGTCCTGCCACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACG]
[+] EMBL CF300227             [                                                          TTTTAGCTAAAACACTGGTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGGACATCAAAAATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCCTGCCGGAAACAATTACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATTTTTTTTTTTTTCCTCCCCCCAATTCATTAACATTTTATACATGCATACTCCAC  AAAAAAAAAAGAAGAAACCGGAAGAGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGAGATGC                                                                                                                                                                                                                           ]




>consensus_10941#0
GATACGCTACGTAACGACATGACAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
AGCTAAAACACTGCTGCTACCATGAAATAGTTTATCCCCCTGTAGTACTGTACATCAAAA
ATTCACCACTCAACTCACCCCCTCACCCATGCATCCAAATCCATGCATGCAGGAAACAAT
TACCACAACACACACAGTAAGTCTGAATCTCATCACATCCATCTTTTTCTCTCTCCTCCC
CCCAATTCATTAACATCTTATACATGCATACTCCACAAAAAAAAAAGAAGAAACAAGAAG
AGAACATTTTCCATCGCCCAATCATCGGTTTCACCAGCCTGAACTCATCAAGCTCCTTGA
GATGCCCTGGCCCTGATGAAATCGATCACACGCTCAACCTGACAGCGTCTGGATGATGGT
GTTGTGCCACGGGTCAAACAGGTGCTGCAACAGGTTGTCAAAGGGCCCCTTCTGCGTCAC
GTTGTGCTGCACCAGGAACCCCAAGAACGCCAGCATCGCCAGCGTTCTTGATGTCCTGCC
ACCGCCGGATCTCCACGTAGTGGAACAGGATGAACTCGATGACG
clustalw multiple alignements is not computed in this case