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Oryza sativa
cluster # 10951 cluster # 10951       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10951#0 length = 3216 sequences # 6  
 consensus_10951#1 length = 560 sequences # 2  
consensusID : consensus_10951#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 3216
fasta sequence 
                              [CGAAATTCAAACGGATCGATTTGGTTTTGTTGATTTGATCTGGCCGGACAAGGAGAAGCAGAGGAGGAGGAGAGTTCGAGATCGAGATCCATGGCGCTGCTCTGCTTCCTGCTCGACATGCGGAACATCCCCCCTCCGCTCCTCCACCTCCTCAAGCAGTGCCTACTCCACCTCGCCAACCTCTACGCCGCCATCCCCTCCGCCGACCTCCCCGACCGCCTCGCCCTCTGCTACGTCCACCCCGCCGCCTCCTCCTCGCCTCCTCAGCTCAAGGTGGTGTATAGGCCTGGAGAGAAATTTAACCTTCGAGACTTCCATCATGCTGTCAACAATTTGCCTCTCGATGCCTTTCGTCCTAACCAACATGGATCTCTACATACTACTGGAGATGTGTCATTAACAAATCTTTTTAGCAATCGAGCTATCTATTCTTGGGCCACTGATGATACCTCCAAAAAAGTGATTGCTTTATGTATGTCTGCACAAAACACGCAAGCTCTCCGAAGATCTCTCATGGACGCAGCAGAACAGTGTATTACAGTGGAGTTTGTATTGCTGGAAACAGGAGCTGCATTCGTATGTGATGGTGTTTCTGAAAATTCCAATGGTTTCATAGACACAATTTGTGACCTTGAAAACTGTGTGGTACGAAGATACAGTCCTGAGACTCAAGTTTTGCATGGATTAGTCAAGAGGTGGTTAGAAGAGCTAAAGGATGACAAGGAGGAGGCATTGCAGGCTGTATTTGTATTCAGAGTTCCCATTATCAGCACTGTTAATCAAATATCTTGCAGCATGTATGCTTCAGCAAATCACATCATTGATGGTTTTCCATCATGTCAGATATGCAGGTGCCATGGTCGCCCTATTGACCTTGCTAACACAAATAAGGCAAAATGGATGTGCCCAATAACTAGCCGACAGCTCACAGCTTCTGATGTTACTGATACTGCTGTGAAAATTGGGGAACAGACAGTACTGTTTCTTCCTGACTCAGAAGGCGTTTCAAGCTTGCGACGAGCCTCATCCTCCATTTCTTTTGACGTGATTGAGCGCACCAATTTAGCCTCACTAAATGAAGGACTCATAATTGGGACGCCTCATATTGTGATTCCCAGCTCTAATGATGTTGAGGTTGCTCTTGATGATGAGTGCTCCTCAGAACACCCAACTTTTCTATGGTCTATGTGAGACACTTTTCAAGCTTGATCAGGGACTTGTGTGCTCCTCAAAATGCAATACTGAAACGATGAAGGTAGGATCCCTTGAGTGTTATTATCTTCTCCAACCATCTGAGAAGGGACCGATGCTTCTGAGGAGGCTTGCTGGATCTGAAGAGATACTGCCTCTCCCAGTTGTGAGTCGACCTTGCAACTCTACCGGTACCAAGGAAGTCCAGAATTTGATCGAAACCTCATTATCTAAGATTGTGCTGAAGGATTACAACCCTCTACAACATGAGAGAGGTTTTCACTCGAGACTGAATTGTCTGGTGAAGGATAGCCTTCAATTTGGTTGTGATTGATTCTGCAGATCAATTGCTCCGGCTTGTGGCGCGAAGGATCCTCATCATCTTGATTCGTTGAGTGAACCACAAATATTGACATTCCGGGGTCCAGAGGAAAACAAGGTGCTGAGGCTGTGTAGGGAGGAGGGTGGAGATATCCAATCGTTCAGCTTCAGCGAGCCACAGGCAGCGTCAAAGGAGAAGGCGTCGCCCAGGCCCAGCATCACCGAGGAGTGGGAACAGCTTATCATCATCGACGACGACTTCACCAGTGCCGTCACATGTTCTACTTCTAGGGCCAACCCCAAGCTGCCGTCCCCAGTGAAACCGCTGGGCCTGGACGACAAGACAAGCAGGATTCTGGAGAGGCTGGAAGCTCCCAGGGCAAAGAAGCAGAGGGCTACCACCAGCACACGCACCGGCAACAGCAACACAACTCCACCACCACCAGCGTCCAGCATTGGAGCCGGAACACAGATCAAGAAGCCATTGCTGCCATTTGAACCCAGCGCAAGCCAACCTCTGAGACCCACCTTCAGCAAGCTCAGGCGGAAGCCCACTGCAGCTACCTAGCTTGCTGCCCTTTTTACTACAGTCCCATGTATAGAGACAGGAAGATATTATCACACCTTCTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTAACAT-TG-GAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCT-ACATCTGGCAACTCCTGAATCAGTGGGTCTAACAGCTCTAGGTACCGGTGTGACTGGACTAGAGGTGTTGCCCACTCAAATATAGTCTGCCATCCAACAGACTCGACAGACTGAGTAGGCCGACGGCCACTGATGATCTCTAGAAGGAGCACACCAAAGCTGTAGACATCGCTCTTTGTTGTCAGTTCATTCCTGTATATGAATTCAGGAGCAAGGTACCCATAGGTTGCAGCCTTCACAGTCCTCTCGTGCATTACTTCCCATGGTACAAACTTGGACAGCCCAACCCCCATCAGATGGGAACCAAATTCCTCGTCAAGTAGCACGTTGCTTGCACGGATATCACGGTGCACGACCTGCGGCTTCACCTTGTCATGCAAAAATGCGATCCCTTGTGCAAGAGTTGTAGCAACTCTCATCCTCATTGGCCAATCAAGGCACCGCCCTCCTCTAGGGACATGATGTAGCCAAACATCCAACGGCCCATTGGCAACAAACTCATAAACAATAAAGCGGTCACCATGATCGTAACAACATCCTTTTACTGCAACTAAATTAGGATGATACAGCTTTGCAACTCTCCCAATCT]

[+] EMBL AK069975             [CGAAATTCAAACGGATCGATTTGGTTTTGTTGATTTGATCTGGCCGGACAAGGAGAAGCAGAGGAGGAGGAGAGTTCGAGATCGAGATCCATGGCGCTGCTCTGCTTCCTGCTCGACATGCGGAACATCCCCCCTCCGCTCCTCCACCTCCTCAAGCAGTGCCTACTCCACCTCGCCAACCTCTACGCCGCCATCCCCTCCGCCGACCTCCCCGACCGCCTCGCCCTCTGCTACGTCCACCCCGCCGCCTCCTCCTCGCCTCCTCAGCTCAAGGTGGTGTATAGGCCTGGAGAGAAATTTAACCTTCGAGACTTCCATCATGCTGTCAACAATTTGCCTCTCGATGCCTTTCGTCCTAACCAACATGGATCTCTACATACTACTGGAGATGTGTCATTAACAAATCTTTTTAGCAATCGAGCTATCTATTCTTGGGCCACTGATGATACCTCCAAAAAAGTGATTGCTTTATGTATGTCTGCACAAAACACGCAAGCTCTCCGAAGATCTCTCATGGACGCAGCAGAACAGTGTATTACAGTGGAGTTTGTATTGCTGGAAACAGGAGCTGCATTCGTATGTGATGGTGTTTCTGAAAATTCCAATGGTTTCATAGACACAATTTGTGACCTTGAAAACTGTGTGGTACGAAGATACAGTCCTGAGACTCAAGTTTTGCATGGATTAGTCAAGAGGTGGTTAGAAGAGCTAAAGGATGACAAGGAGGAGGCATTGCAGGCTGTATTTGTATTCAGAGTTCCCATTATCAGCACTGTTAATCAAATATCTTGCAGCATGTATGCTTCAGCAAATCACATCATTGATGGTTTTCCATCATGTCAGATATGCAGGTGCCATGGTCGCCCTATTGACCTTGCTAACACAAATAAGGCAAAATGGATGTGCCCAATAACTAGCCGACAGCTCACAGCTTCTGATGTTACTGATACTGCTGTGAAAATTGGGGAACAGACAGTACTGTTTCTTCCTGACTCAGAAGGCGTTTCAAGCTTGCGACGAGCCTCATCCTCCATTTCTTTTGACGTGATTGAGCGCACCAATTTAGCCTCACTAAATGAAGGACTCATAATTGGGACGCCTCATATTGTGATTCCCAGCTCTAATGATGTTGAGGTTGCTCTTGATGATGAGTGCTCCTCAGAACACCCAACTTTTCTATGGTCTATGTGAGACACTTTTCAAGCTTGATCAGGGACTTGTGTGCTCCTCAAAATGCAATACTGAAACGATGAAGGTAGGATCCCTTGAGTGTTATTATCTTCTCCAACCATCTGAGAAGGGACCGATGCTTCTGAGGAGGCTTGCTGGATCTGAAGAGATACTGCCTCTCCCAGTTGTGAGTCGACCTTGCAACTCTACCGGTACCAAGGAAGTCCAGAATTTGATCGAAACCTCATTATCTAAGATTGTGCTGAAGGATTACAACCCTCTACAACATGAGAGAGGTTTTCACTCGAGACTGAATTGTCTGGTGAAGGATAGCCTTCAATTTGGTTGTGATTGATTCTGCAGATCAATTGCTCCGGCTTGTGGCGCGAAGGATCCTCATCATCTTGATTCGTTGAGTGAACCACAAATATTGACATTCCGGGGTCCAGAGGAAAACAAGGTGCTGAGGCTGTGTAGGGAGGAGGGTGGAGATATCCAATCGTTCAGCTTCAGCGAGCCACAGGCAGCGTCAAAGGAGAAGGCGTCGCCCAGGCCCAGCATCACCGAGGAGTGGGAACAGCTTATCATCATCGACGACGACTTCACCAGTGCCGTCACATGTTCTACTTCTAGGGCCAACCCCAAGCTGCCGTCCCCAGTGAAACCGCTGGGCCTGGACGACAAGACAAGCAGGATTCTGGAGAGGCTGGAAGCTCCCAGGGCAAAGAAGCAGAGGGCTACCACCAGCACACGCACCGGCAACAGCAACACAACTCCACCACCACCAGCGTCCAGCATTGGAGCCGGAACACAGATCAAGAAGCCATTGCTGCCATTTGAACCCAGCGCAAGCCAACCTCTGAGACCCACCTTCAGCAAGCTCAGGCGGAAGCCCACTGCAGCTACCTAGCTTGCTGCCCTTTTTACTACAGTCCCATGTATAGAGACAGGAAGATATTATCACACCTTCTATCAAATGTAGATATATAGATAAGGTCACTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL AK072087             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGATATTATCACACCTTCTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTAACAT TG GAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGACCAAGTCAACAACCTTCTGGATGACACCT ACATCTGGCAACTCCTGAATCAGTGGGTCTAACAGCTCTAGGTACCGGTGTGACTGGACTAGAGGTGTTGCCCACTCAAATATAGTCTGCCATCCAACAGACTCGACAGACTGAGTAGGCCGACGGCCACTGATGATCTCTAGAAGGAGCACACCAAAGCTGTAGACATCGCTCTTTGTTGTCAGTTCATTCCTGTATATGAATTCAGGAGCAAGGTACCCATAGGTTGCAGCCTTCACAGTCCTCTCGTGCATTACTTCCCATGGTACAAACTTGGACAGCCCAACCCCCATCAGATGGGAACCAAATTCCTCGTCAAGTAGCACGTTGCTTGCACGGATATCACGGTGCACGACCTGCGGCTTCACCTTGTCATGCAAAAATGCGATCCCTTGTGCAAGAGTTGTAGCAACTCTCATCCTCATTGGCCAATCAAGGCACCGCCCTCCTCTAGGGACATGATGTAGCCAAACATCCAACGGCCCATTGGCAACAAACTCATAAACAATAAAGCGGTCACCATGATCGTAACAACATCCTTTTACTGCAACTAAATTAGGATGATACAGCTTTGCAACTCTCCCAATCT]
[-] EMBL AK103808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TATTATCACACCTTCTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTAACAT TG GAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCT ACATCTGGCAACTCCTGAATCAGTGGGTCTAACAGCTCTAGGTACCGGTGTGACTGGACTAGAGGTGTTGCCCACTCAAATATAGTCTGCCATCCAACAGACTCGACAGACTGAGTAGGCCGACGGCCACTGATGATCTCTAGAAGGAGCACACCAAAGCTGTAGACATCGCTCTTTGTTGTCAGTTCATTCCTGTATATGAATTCAGGAGCAAGGTACCCATAGGTTGCAGCCTTCACAGTCCTCTCGTGCATTACTTCCCATGGTACAAACTTGGACAGCCCAACCCCCATCAGATGGGAACCAAATTCCTCGTCAAGTAGCACGTTGCTTGCACGGATATCACGGTGCACGACCTGCGGCTTCACCTTGTCATGCAAAAATGCGATCCCTTGTGCAAGAGTTGTAGCAACTCTCATCCTCATTGGCCAATCAAGGCACCGCCCTCCTCTAGGGACATGATGTAGCCAAACATCCAACGGCCCATTGGCAACAAACTCATAAACAATAAAGCGGTCACCATGATCGTAACAACATCCTTTTACTGCAACTAAATTAGGATGATACAGCTTTGCAACTCTCCCAATCT]
[-] EMBL BI809135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tttttTATTATCACACCTTCTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAA TTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGAGCAATGACCATTTTAACAACAAACAGCCAATTGCTACACAAAGGTTAA TTGG TTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTAACATGTG GAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGA CAAGTCAACAACTTTCTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF280293             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      tttTTTTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGACCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTAACAT TGNGAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCT ACATCTGGCAACTCCTGAATCAGTGGGTCTAACAGCTCTA GTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BM038573             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ttTTTTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAA TTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGAGCAATGACCATTTTAACAACAAACAG CCAATGCTACACAAAGGTTAATTTGG TTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAACTACTGAA TGGTTTTCCTCTAGCAG GGATTTCAGCGAGGAGTCCGAACCTCCAANGGTAACAT TG GAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTAGCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACATGCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCTAACATCTGGCAACTCCTGAATCAGGGGGgt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]




>consensus_10951#0
CGAAATTCAAACGGATCGATTTGGTTTTGTTGATTTGATCTGGCCGGACAAGGAGAAGCA
GAGGAGGAGGAGAGTTCGAGATCGAGATCCATGGCGCTGCTCTGCTTCCTGCTCGACATG
CGGAACATCCCCCCTCCGCTCCTCCACCTCCTCAAGCAGTGCCTACTCCACCTCGCCAAC
CTCTACGCCGCCATCCCCTCCGCCGACCTCCCCGACCGCCTCGCCCTCTGCTACGTCCAC
CCCGCCGCCTCCTCCTCGCCTCCTCAGCTCAAGGTGGTGTATAGGCCTGGAGAGAAATTT
AACCTTCGAGACTTCCATCATGCTGTCAACAATTTGCCTCTCGATGCCTTTCGTCCTAAC
CAACATGGATCTCTACATACTACTGGAGATGTGTCATTAACAAATCTTTTTAGCAATCGA
GCTATCTATTCTTGGGCCACTGATGATACCTCCAAAAAAGTGATTGCTTTATGTATGTCT
GCACAAAACACGCAAGCTCTCCGAAGATCTCTCATGGACGCAGCAGAACAGTGTATTACA
GTGGAGTTTGTATTGCTGGAAACAGGAGCTGCATTCGTATGTGATGGTGTTTCTGAAAAT
TCCAATGGTTTCATAGACACAATTTGTGACCTTGAAAACTGTGTGGTACGAAGATACAGT
CCTGAGACTCAAGTTTTGCATGGATTAGTCAAGAGGTGGTTAGAAGAGCTAAAGGATGAC
AAGGAGGAGGCATTGCAGGCTGTATTTGTATTCAGAGTTCCCATTATCAGCACTGTTAAT
CAAATATCTTGCAGCATGTATGCTTCAGCAAATCACATCATTGATGGTTTTCCATCATGT
CAGATATGCAGGTGCCATGGTCGCCCTATTGACCTTGCTAACACAAATAAGGCAAAATGG
ATGTGCCCAATAACTAGCCGACAGCTCACAGCTTCTGATGTTACTGATACTGCTGTGAAA
ATTGGGGAACAGACAGTACTGTTTCTTCCTGACTCAGAAGGCGTTTCAAGCTTGCGACGA
GCCTCATCCTCCATTTCTTTTGACGTGATTGAGCGCACCAATTTAGCCTCACTAAATGAA
GGACTCATAATTGGGACGCCTCATATTGTGATTCCCAGCTCTAATGATGTTGAGGTTGCT
CTTGATGATGAGTGCTCCTCAGAACACCCAACTTTTCTATGGTCTATGTGAGACACTTTT
CAAGCTTGATCAGGGACTTGTGTGCTCCTCAAAATGCAATACTGAAACGATGAAGGTAGG
ATCCCTTGAGTGTTATTATCTTCTCCAACCATCTGAGAAGGGACCGATGCTTCTGAGGAG
GCTTGCTGGATCTGAAGAGATACTGCCTCTCCCAGTTGTGAGTCGACCTTGCAACTCTAC
CGGTACCAAGGAAGTCCAGAATTTGATCGAAACCTCATTATCTAAGATTGTGCTGAAGGA
TTACAACCCTCTACAACATGAGAGAGGTTTTCACTCGAGACTGAATTGTCTGGTGAAGGA
TAGCCTTCAATTTGGTTGTGATTGATTCTGCAGATCAATTGCTCCGGCTTGTGGCGCGAA
GGATCCTCATCATCTTGATTCGTTGAGTGAACCACAAATATTGACATTCCGGGGTCCAGA
GGAAAACAAGGTGCTGAGGCTGTGTAGGGAGGAGGGTGGAGATATCCAATCGTTCAGCTT
CAGCGAGCCACAGGCAGCGTCAAAGGAGAAGGCGTCGCCCAGGCCCAGCATCACCGAGGA
GTGGGAACAGCTTATCATCATCGACGACGACTTCACCAGTGCCGTCACATGTTCTACTTC
TAGGGCCAACCCCAAGCTGCCGTCCCCAGTGAAACCGCTGGGCCTGGACGACAAGACAAG
CAGGATTCTGGAGAGGCTGGAAGCTCCCAGGGCAAAGAAGCAGAGGGCTACCACCAGCAC
ACGCACCGGCAACAGCAACACAACTCCACCACCACCAGCGTCCAGCATTGGAGCCGGAAC
ACAGATCAAGAAGCCATTGCTGCCATTTGAACCCAGCGCAAGCCAACCTCTGAGACCCAC
CTTCAGCAAGCTCAGGCGGAAGCCCACTGCAGCTACCTAGCTTGCTGCCCTTTTTACTAC
AGTCCCATGTATAGAGACAGGAAGATATTATCACACCTTCTATCAAATGTAGATATATAG
ATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACAT
AGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTA
CACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTC
CTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAAC
TACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTA
ACATTGGAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTA
GCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACAT
GCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCTACATCTGGCAACT
CCTGAATCAGTGGGTCTAACAGCTCTAGGTACCGGTGTGACTGGACTAGAGGTGTTGCCC
ACTCAAATATAGTCTGCCATCCAACAGACTCGACAGACTGAGTAGGCCGACGGCCACTGA
TGATCTCTAGAAGGAGCACACCAAAGCTGTAGACATCGCTCTTTGTTGTCAGTTCATTCC
TGTATATGAATTCAGGAGCAAGGTACCCATAGGTTGCAGCCTTCACAGTCCTCTCGTGCA
TTACTTCCCATGGTACAAACTTGGACAGCCCAACCCCCATCAGATGGGAACCAAATTCCT
CGTCAAGTAGCACGTTGCTTGCACGGATATCACGGTGCACGACCTGCGGCTTCACCTTGT
CATGCAAAAATGCGATCCCTTGTGCAAGAGTTGTAGCAACTCTCATCCTCATTGGCCAAT
CAAGGCACCGCCCTCCTCTAGGGACATGATGTAGCCAAACATCCAACGGCCCATTGGCAA
CAAACTCATAAACAATAAAGCGGTCACCATGATCGTAACAACATCCTTTTACTGCAACTA
AATTAGGATGATACAGCTTTGCAACTCTCCCAATCT

consensusID : consensus_10951#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 560
fasta sequence 
                              [CGGGTTTTCCCTTTTTTGTTTCCGGTTTTTTTTTTTTTGGGATTTTTAAGGGGTTACCATTTTTCCCAGGGAACAAGTTTTTCCCTTTTTTTCCCCAAGTTTAAATTTACCCTTCCTTAAAGGGGTTTTTTTTCCGGTTTTAAAGAATTTTCCCTTTTGTTAGGTAAGGGAATACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTNCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCCCTAGCAGTGGGTTTCAGC]

[-] EMBL CF313869             [CGGGTTTTCCCTTTTTTGTTTCCGGTTTTTTTTTTTTTGGGATTTTTAAGGGGTTACCATTTTTCCCAGGGAACAAGTTTTTCCCTTTTTTTCCCCAAGTTTAAATTTACCCTTCCTTAAAGGGGTTTTTTTTCCGGTTTTAAAGAATTTTCCCTTTTGTTAGGTAAGGGAATACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGTACACA                                                                                                                                                                                                   ]
[-] EMBL AU070304             [                                                                                                                                                                                                                                                 TTTTTTTTTTTTTTTTTTTTTTTTATCAAATGTAGATATATAGATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGNGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGCAGACACTTCAATAGATGTNCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTCCCCTAGCAGTGGGTTTCAGC]




>consensus_10951#1
CGGGTTTTCCCTTTTTTGTTTCCGGTTTTTTTTTTTTTGGGATTTTTAAGGGGTTACCAT
TTTTCCCAGGGAACAAGTTTTTCCCTTTTTTTCCCCAAGTTTAAATTTACCCTTCCTTAA
AGGGGTTTTTTTTCCGGTTTTAAAGAATTTTCCCTTTTGTTAGGTAAGGGAATACAAGGG
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTATCAAATGTAGATATATAGATAAGGTCACTATTAC
AACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACATAGAGGCCAACTCAAGT
ACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTACACAAAGGTTAATTTG
GTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTCCTAGTACTAGTTAAGC
AGACACTTCAATAGATGTNCTGCCAGCTGACTGACATCGGAAACTACTGAATTGGTTTTC
CCCTAGCAGTGGGTTTCAGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10951#0      CGAAATTCAAACGGATCGATTTGGTTTTGTTGATTTGATCTGGCCGGACAAGGAGAAGCA 60
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GAGGAGGAGGAGAGTTCGAGATCGAGATCCATGGCGCTGCTCTGCTTCCTGCTCGACATG 120
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CGGAACATCCCCCCTCCGCTCCTCCACCTCCTCAAGCAGTGCCTACTCCACCTCGCCAAC 180
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CTCTACGCCGCCATCCCCTCCGCCGACCTCCCCGACCGCCTCGCCCTCTGCTACGTCCAC 240
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CCCGCCGCCTCCTCCTCGCCTCCTCAGCTCAAGGTGGTGTATAGGCCTGGAGAGAAATTT 300
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      AACCTTCGAGACTTCCATCATGCTGTCAACAATTTGCCTCTCGATGCCTTTCGTCCTAAC 360
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAACATGGATCTCTACATACTACTGGAGATGTGTCATTAACAAATCTTTTTAGCAATCGA 420
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCTATCTATTCTTGGGCCACTGATGATACCTCCAAAAAAGTGATTGCTTTATGTATGTCT 480
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCACAAAACACGCAAGCTCTCCGAAGATCTCTCATGGACGCAGCAGAACAGTGTATTACA 540
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GTGGAGTTTGTATTGCTGGAAACAGGAGCTGCATTCGTATGTGATGGTGTTTCTGAAAAT 600
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TCCAATGGTTTCATAGACACAATTTGTGACCTTGAAAACTGTGTGGTACGAAGATACAGT 660
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CCTGAGACTCAAGTTTTGCATGGATTAGTCAAGAGGTGGTTAGAAGAGCTAAAGGATGAC 720
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      AAGGAGGAGGCATTGCAGGCTGTATTTGTATTCAGAGTTCCCATTATCAGCACTGTTAAT 780
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAAATATCTTGCAGCATGTATGCTTCAGCAAATCACATCATTGATGGTTTTCCATCATGT 840
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAGATATGCAGGTGCCATGGTCGCCCTATTGACCTTGCTAACACAAATAAGGCAAAATGG 900
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      ATGTGCCCAATAACTAGCCGACAGCTCACAGCTTCTGATGTTACTGATACTGCTGTGAAA 960
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      ATTGGGGAACAGACAGTACTGTTTCTTCCTGACTCAGAAGGCGTTTCAAGCTTGCGACGA 1020
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCCTCATCCTCCATTTCTTTTGACGTGATTGAGCGCACCAATTTAGCCTCACTAAATGAA 1080
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GGACTCATAATTGGGACGCCTCATATTGTGATTCCCAGCTCTAATGATGTTGAGGTTGCT 1140
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CTTGATGATGAGTGCTCCTCAGAACACCCAACTTTTCTATGGTCTATGTGAGACACTTTT 1200
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAAGCTTGATCAGGGACTTGTGTGCTCCTCAAAATGCAATACTGAAACGATGAAGGTAGG 1260
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      ATCCCTTGAGTGTTATTATCTTCTCCAACCATCTGAGAAGGGACCGATGCTTCTGAGGAG 1320
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCTTGCTGGATCTGAAGAGATACTGCCTCTCCCAGTTGTGAGTCGACCTTGCAACTCTAC 1380
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CGGTACCAAGGAAGTCCAGAATTTGATCGAAACCTCATTATCTAAGATTGTGCTGAAGGA 1440
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TTACAACCCTCTACAACATGAGAGAGGTTTTCACTCGAGACTGAATTGTCTGGTGAAGGA 1500
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TAGCCTTCAATTTGGTTGTGATTGATTCTGCAGATCAATTGCTCCGGCTTGTGGCGCGAA 1560
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GGATCCTCATCATCTTGATTCGTTGAGTGAACCACAAATATTGACATTCCGGGGTCCAGA 1620
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GGAAAACAAGGTGCTGAGGCTGTGTAGGGAGGAGGGTGGAGATATCCAATCGTTCAGCTT 1680
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAGCGAGCCACAGGCAGCGTCAAAGGAGAAGGCGTCGCCCAGGCCCAGCATCACCGAGGA 1740
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GTGGGAACAGCTTATCATCATCGACGACGACTTCACCAGTGCCGTCACATGTTCTACTTC 1800
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TAGGGCCAACCCCAAGCTGCCGTCCCCAGTGAAACCGCTGGGCCTGGACGACAAGACAAG 1860
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAGGATTCTGGAGAGGCTGGAAGCTCCCAGGGCAAAGAAGCAGAGGGCTACCACCAGCAC 1920
consensus_10951#1      CGGGTTTTCCC-----TTTTTTGTTTCCGGTTTTTTTTTTTTTGGGATTTTTAAGGGGTT 55
                       * ** **          *    * * ** *              **  *   *   *   

consensus_10951#0      ACGCACCGGCAACAGCAACACAACTCCACCACCACCAGCGTCCAGCATTGGAGCCGGAAC 1980
consensus_10951#1      AC-CATTTTTCCCAGGGA-ACAAGTTTTTCCCTTTTTTTCCCCAA-GTTTAAATTTACCC 112
                       ** **       ***  * **** *    * *         ***   **  *       *

consensus_10951#0      ACAGATCAAGAAGCCATTGCTGCCATTTGAACCCAGCGCAAGCCAACCTCTGAGACCCAC 2040
consensus_10951#1      TTCCTTAAAGGGGTTTTTTTTCCGGTTTTAA---AGAATTTTCCCTTTTGTTAGGTAAG- 168
                            * ***  *   **  * *  *** **   **      **    * * **      

consensus_10951#0      CTTCAGCAAGCTCAGGCGGAAGCCCACTGCAGCTACCTAGCTTGCTGCCCTTTTTACTAC 2100
consensus_10951#1      ----GGAATACAAGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 224
                            * *  *   **           *     *   *   **  *    *****  *  

consensus_10951#0      AGTCCCATGTATAGAGACAGGAAGATATTATCACACCTTCTATCAAATGTAGATATATAG 2160
consensus_10951#1      TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATCAAATGTAGATATATAG 284
                         *    * * *             * ** *      ** ********************

consensus_10951#0      ATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACAT 2220
consensus_10951#1      ATAAGGTCACTATTACAACCATTCAGAAATTTGTGCTCACTAAACTGATATCTTCTACAT 344
                       ************************************************************

consensus_10951#0      AGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTA 2280
consensus_10951#1      AGAGGCCAACTCAAGTACACATGGGCAATGACCATTTTAACAACAAACAGCCCATTGCTA 404
                       ************************************************************

consensus_10951#0      CACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTC 2340
consensus_10951#1      CACAAAGGTTAATTTGGTTTGGCCTATGGGGGTCCTAACTTCTCCCCTCAAGTACTTCTC 464
                       ************************************************************

consensus_10951#0      CTAGTACTAGTTAAGCAGACACTTCAATAGATGTGCTGCCAGCTGACTGACATCGGAAAC 2400
consensus_10951#1      CTAGTACTAGTTAAGCAGACACTTCAATAGATGTNCTGCCAGCTGACTGACATCGGAAAC 524
                       ********************************** *************************

consensus_10951#0      TACTGAATTGGTTTTCCTCTAGCAGTGGATTTCAGCGAGGAGTCCGAACCTCCAATGGTA 2460
consensus_10951#1      TACTGAATTGGTTTTCCCCTAGCAGTGGGTTTCAGC------------------------ 560
                       ***************** ********** *******                        

consensus_10951#0      ACATTGGAGATGTAGCGCTAGTGCTTGTGCCGCTCAGTTGTTCTGATGCTGCTGACTTTA 2520
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCTCAAGTTGCTGGAGCTGATGGACCACATGAGACATCCTTGGTCGCACCGAAGGGACAT 2580
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      GCTGGGTGCAGGCATAGACCAAGTCAACAACTTTCTGGATGACACCTACATCTGGCAACT 2640
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CCTGAATCAGTGGGTCTAACAGCTCTAGGTACCGGTGTGACTGGACTAGAGGTGTTGCCC 2700
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      ACTCAAATATAGTCTGCCATCCAACAGACTCGACAGACTGAGTAGGCCGACGGCCACTGA 2760
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TGATCTCTAGAAGGAGCACACCAAAGCTGTAGACATCGCTCTTTGTTGTCAGTTCATTCC 2820
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TGTATATGAATTCAGGAGCAAGGTACCCATAGGTTGCAGCCTTCACAGTCCTCTCGTGCA 2880
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      TTACTTCCCATGGTACAAACTTGGACAGCCCAACCCCCATCAGATGGGAACCAAATTCCT 2940
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CGTCAAGTAGCACGTTGCTTGCACGGATATCACGGTGCACGACCTGCGGCTTCACCTTGT 3000
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CATGCAAAAATGCGATCCCTTGTGCAAGAGTTGTAGCAACTCTCATCCTCATTGGCCAAT 3060
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAAGGCACCGCCCTCCTCTAGGGACATGATGTAGCCAAACATCCAACGGCCCATTGGCAA 3120
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      CAAACTCATAAACAATAAAGCGGTCACCATGATCGTAACAACATCCTTTTACTGCAACTA 3180
consensus_10951#1      ------------------------------------------------------------
                                                                                   

consensus_10951#0      AATTAGGATGATACAGCTTTGCAACTCTCCCAATCT 3216
consensus_10951#1      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)