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Oryza sativa
cluster # 10975 cluster # 10975       Sequences # 8       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10975#0 length = 1378 sequences # 8  
consensusID : consensus_10975#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1378
fasta sequence 
                              [TTCATTTCCTTTCTCTTTTCTCTTTCTTTCTCTCTCTTTCTTGGTGTTGGAAGGCGAAGGCAACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGGTGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCT-GCTCCAAAAAGCAGCAGCAGCAGCAGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGAGCCCATGAATACCCAACCAGCGGAG-TCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTTATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGTTTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGT-GGGGTTGTTTTCTGAGGATCAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAGTCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAGAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATGCTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGTGTAACTGATTTGTTTGTACAAATGAATGATTTGCAGTTGTGGAAGTTGAATAGATGTTCGGTCCGTCTCTCTGTTGTTGTTCTGCCTGCTACTCTCTCTCTCTCTCTCTCTCTCTCTATTGTTTGAGAGGGCTGATGCTTTACTGGAGTAATGTAGCCGTCTTAATTG]

[+] EMBL AK103335             [TTCATTTCCTTTCTCTTTTCTCTTTCTTTCTCTCTCTTTCTTGGTGTTGGAAGGCGAAGGCAACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGGTGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCT GCTCCAAAAAGCAGCAGCAGCAGCAGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGAGCCCATGAATACCCAACCAGCGGAG TCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTTATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGTTTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGT GGGGTTGTTTTCTGAGGATCAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAGTCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAGAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATGCTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGTGTAACTGATTTGTTTGTACAAATGAATGATTTGCAGTTGTGGAAGTTGAATAGATGTTCGGTCCGTCTCTCTGTTGTTGTTCTGCCTGCTACTCTCTCTCTCTCTCTCTCTCTCTCTATTGTTTGAGAGGGCTGATGCTTTACTGGAGTAATGTAGCCGTCTTAATTG]
[+] EMBL AK061783             [                                        TTGGTGTTGGAAGGCGAAGGCAACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGGTGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCT GCTCCAAAAAGCAGCAGCAGCAGCAGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGAGCCCATGAATACCCAACCAGCGGAG TCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTTATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGTTTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGT GGGGTTGTTTTCTGAGGATCAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAGTCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAGAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATGCTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGTGTAACTGATTTGTTTGTACAAATGAATGATTTGCAGTTGTGGAAGTTGAATAG                                                                                                                   ]
[+] EMBL AU069995             [                                                   AGGCGAAGGCAACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGATGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCTNGCTCCAAAAAGCAGCAGCAGNAGCAGCGCGGA NTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCANTCCGGNATCGAAGTGCATGG ATGGAGTATGGGTTTGGAG CCATGAATACCCAACCAGCGGAGTTTTTCCAAGTAGNGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB645159             [                                                             AACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGGTGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCT GCTCCAAAAAGCAGCAGCAGCAGCAGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGAGCCCATGAATACCCAACCAGCGGAG TCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTTATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGTTTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGTGGGGGTTGTTTTCTGAGGATCAATCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB654588             [                                                                                              ATCCCCCCTTGAGGGTGCTCCCGGCGTCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCCACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCT GCTCCAAAAAGCAGCAGCAGCAGCAGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGGTTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGAGCCCATGAATACCCAACCAGCGGAG TCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTTATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGTTTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB654589             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAAAGAATTGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGGGTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAGGTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCTAATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCAAGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGT GGGGTTGTTTTCTGAGGATCAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAGTCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAGAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATGCTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGTGTAACTGATTTGTTTGTACAAATGAATGATTTGCAGTTGTGGAAGTTGAATAGATGTTCGGT                                                                                                          ]
[+] EMBL BM420954             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GATAAGATATTAACTCCTGGCAGGGATAGCTTGTAATTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGT GGGGTTGTTTTCTGAGGATCAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAGTCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAGAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATGCTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGTGTAACTGATTTGTTTGTACNAATGAATGATTTGCAGTTGTGGAAaaaa                                                                                                                        ]
[+] EMBL AU172847             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        TATAATCCATGAATGGNAATTCTGTGTGTCTTNCCCTAAAGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCNTTATAAGTATATGCTGTTTTTAAAAANGGGANGGGAGGGGAGGAGTGCGTTGNCAGTGTGGTATGTATATGCTGTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGTTTTGTTGTGNGGAACTGATTTGTTTGGACAAATGAATGATTTGCAGTTGTGGAAGTTn                                                                                                                        ]




>consensus_10975#0
TTCATTTCCTTTCTCTTTTCTCTTTCTTTCTCTCTCTTTCTTGGTGTTGGAAGGCGAAGG
CAACCCAGGGGGGGAAGCACCGGAGGAGCCGCAGATCCCGCCATGCGGGTGCTCCCGGCG
TCGTGGTCCTCCGCCGCCTCCTCCTCCGCCTCCGCCTCCGCGGACCGCCTCAACTCCCCC
ACCCCGGCGCCGCCGCCGCCGGCCCCTCCTCCTCCTGCTCCAAAAAGCAGCAGCAGCAGC
AGCGCGGAGCTGTACCTCAACATCTACGACATCTCCCCAATCAACCACTACCTCTACTGG
TTCGGCCTCGGCATCTTCCACTCCGGCATCGAAGTGCATGGCATGGAGTATGGGTTTGGA
GCCCATGAATACCCAACCAGCGGAGTCTTCCAAGTAGAGCCCAAAAGCTGTCCTGGCTTT
ATCTTCAGACGCTCCGTGTGCGTGGGTTCCACTGATATGTCTCGTTCGGAAGTCCGCAGT
TTCATAGAGGATCTTGCAGAGGATTATCACGGGGACACTTATCATTTGATTGCAAAGAAT
TGTAATCATTTTACAGCAGACATCTGCAAGCGTCTGACTGGAAAGCCAATTCCTGGATGG
GTCAATCGACTTGCCAGATTAGGTTCTTTCTGCAACTGTGTACTGCCTGAAAGCATCAAG
GTTTCCGCTGTCAAAGATGTAACCGATCCCCCCGAGTTTCCTGATGATGATATGGAGTCT
AATGCATCCATTGTTGACGGAAGTGATGCGGATGATTTAGACCATCTTCTAATAACCCCA
AGTAGCGATGTTGTATCTTCAAAAGATAAGATATTAACTCCTGGCAGGGATAGCTTGTAA
TTGCATGTATTCTCCATTGATATAGTTCAAGTATTACTTGTGGGGTTGTTTTCTGAGGAT
CAATCTGATGATTTCTTGCTGAGTGGCGATGTGGCTGGAGGAGGGGTATGCTGTGGGCAG
TCAACCTTGAATAGTTGAATGTATAATCCATGAATGGTAATTCTGTGTGTCTTACACTAG
AGGTAGTGAATGTGATTGTCTAACTGTGGCGAAGGGCCATGTTTCCATTATAAGTATATG
CTGTTTTGAGAGAGGGGAGGGGAGGGGAGGAGTGCGTTGACAGTGTGGTATGTATATGCT
GTAACTAGTTGGAGAATGATTGACTTCATTTGAGTTACCTAGGTGGGCTTCCTGTTTTGT
TTTGTTGTGTGTAACTGATTTGTTTGTACAAATGAATGATTTGCAGTTGTGGAAGTTGAA
TAGATGTTCGGTCCGTCTCTCTGTTGTTGTTCTGCCTGCTACTCTCTCTCTCTCTCTCTC
TCTCTCTATTGTTTGAGAGGGCTGATGCTTTACTGGAGTAATGTAGCCGTCTTAATTG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)