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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11072#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2690 fasta sequence
[TTCCCGTTCCGTTATAATAAGAGGAGAGAGAGAGAGATTTTGGGTTTGTCTCCGGCTCCGCTCGCCGCCTCCAAATCCCGCTCCTCCGCTGCTGCTCCTCTCTGCCGCGGCGAGGCGAGAGATCCGAATCCACCGCCACCCGCGCCCACCCCGCCCGCACAAACCCTAGTTTTTCCGGGGTTTTGCTTCCCCTCCGCAGCTCCGCTCCGCTCCGTCCGTCGTCTCCTCCCGGCGGCTCGGCTTGCTGTCCATGCTGTAGCCGCCCCCCGCAGGTGGCTGATGGGCTCCCAGAACCGCCCCCCACCACCGCGCAAGAGGCAGCCGCCGCCGCCGGAGGACCACCTCGTCACCTACAAGCGCCGCCGCTCCAAAGAAACACAGCCTTTGCCACTCATGGCCAACGGCGCCAATTCTAAGAAAGACGCCAAGGCCCAACATTGGATTAGCTGGAGGGACACTCTCCACGGCTTCCTCCAATCCCCTGCTATTAGCCAGGGTGGAGGAATTCAGACCTGCATCCGTCATGCTCTCCAACACAATCCTTGCTTGCTCACCAATGGTGTTGTTGTTCACACTGAATTCAAAGGTAACCCAGCTCATTCCCAAGGAGAGGAAGCAAAAGTGCAGCACCCTAATGGTGCTGCTGGAGGCAAGGTGGTTTCTGCAGATGCTGCTATACAAGATGCGGCTGCCGCAGCTTCTTCCGAAGCTAACAAGGCAATGTGTAATAATGCCCTCTTCGACATTTTGGTCTCCCAGAAATTTGCCTTGTTGTGCCATTTGCTACTTGGGACCTTCCATGTCAATAAACCTGGTGATGTCATCGACTTGGAAAAAATCGACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATCCAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAACCTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTG-CA-AGATCCGCAGGGCAGCGGAAGGAATGCATAAGTATGAGGATTCTGTG-CTGAAAATACATGGGAATAGTAAGCATG-CTTGTAATGTGAATCA-GTCGAAGGA-TTCTGAAGGTGATGGTACTGAAAAGTGATCATCA-CA-ATAGCTTTGTGGATTAGC-TTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACA-CCGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGTTGACATCTA-CA-GGAAGAACTCTTACCT-GGTGAAGATGGTGTATGTAGTCTTTTAGCTGGGCGGAATGATGTGT-TGT-TTACTTGTTCACCTTCCTTCTTT-ACCCCCTT-TCAGTGACCATTGTGAATGTTGTCCTGTACTTGCCCTGTGATGGTATTCTTAA--ACGTTTTTTTGGGGGAAATATGATTTTGTTTTTTTAATCTCCTTTTTATTGCTTGATTCGTCATTGTTTATAGCCTGTGATCGATGATTGTGAAGGTTTATAGTCTGTATGTTGTGTATGTAATGGTTTGGTTGATCCTGAAGCTTTTTGGAGGTCTTATTTCAGTCGAGGACAAGCATGAGAGTCAAGGAAGAAAGTGGATCTTCATTTTGTCAGACAATTGTGACAGTCATGGAGCATGTAAGTAGTACTAGTATATAGTTTGAGTGTATGACTAACCCTGAATATTCATTCCTATAGTAAATAGTACTCCTATATCATATTAGAGATTCTGTGGTTGGATTAATAAGTAGTGTAGCTATATCTCCAGATGATGAATTTATATGTGTCCTTGATATGAATTAATGATATTTGTGGTGAG]
[+] EMBL AK069782 [TTCCCGTTCCGTTATAATAAGAGGAGAGAGAGAGAGATTTTGGGTTTGTCTCCGGCTCCGCTCGCCGCCTCCAAATCCCGCTCCTCCGCTGCTGCTCCTCTCTGCCGCGGCGAGGCGAGAGATCCGAATCCACCGCCACCCGCGCCCACCCCGCCCGCACAAACCCTAGTTTTTCCGGGGTTTTGCTTCCCCTCCGCAGCTCCGCTCCGCTCCGTCCGTCGTCTCCTCCCGGCGGCTCGGCTTGCTGTCCATGCTGTAGCCGCCCCCCGCAGGTGGCTGATGGGCTCCCAGAACCGCCCCCCACCACCGCGCAAGAGGCAGCCGCCGCCGCCGGAGGACCACCTCGTCACCTACAAGCGCCGCCGCTCCAAAGAAACACAGCCTTTGCCACTCATGGCCAACGGCGCCAATTCTAAGAAAGACGCCAAGGCCCAACATTGGATTAGCTGGAGGGACACTCTCCACGGCTTCCTCCAATCCCCTGCTATTAGCCAGGGTGGAGGAATTCAGACCTGCATCCGTCATGCTCTCCAACACAATCCTTGCTTGCTCACCAATGGTGTTGTTGTTCACACTGAATTCAAAGGTAACCCAGCTCATTCCCAAGGAGAGGAAGCAAAAGTGCAGCACCCTAATGGTGCTGCTGGAGGCAAGGTGGTTTCTGCAGATGCTGCTATACAAGATGCGGCTGCCGCAGCTTCTTCCGAAGCTAACAAGGCAATGTGTAATAATGCCCTCTTCGTCATTTTGGTCTCCCAGAAATTTGCCTTGTTGTGCCATTTGCTACTTGGGACCTTCCATGTCAATAAACCTGGTGATGTCATCGACTTGGAAAAAATCGACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATCCAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAACCTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTG CA AGATCCGCAGGGCAGCGGAAGGAATGCATAAGTATGAGGATTCTGTG CTGAAAATACATGGGAATAGTAAGCATG CTTGTAATGTGAATCA GTCGAAGGA TTCTGAAGGTGATGGTACTGGAAAGTGATCATCA CA ATAGCTTTGTGGATTAGC TTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACA CAGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGTTGACATCTA CA GGAAGAACTCTTACCT GGTGAAGATGGTGTATGTAGTCTTTTAGCTGGGCGGAATGATGTGT TGT TTACTTGTTCACCTTCCTTCTTT ACCCCCTT TCAGTGACCATTGTGAATGTTGTCCTGTACTTGCCCTGTGATGGTATTCTTAA ACGTTTTTTTGGGGGAAATATGATTTTGTTTTTTTAATCTCCTTTTTATTGCTTGATTCGTCATTGTTTATAGCCTGTGATCGATGATTGTGAAGGTTTATAGTCTGTATGTTGTGTATGTAATGGTTTGGTTGATCCTGAAGCTTTTTGGAGGTCTTATTTCAGTCGAGGACAAGCATGAGAGTCAAGGAAGAAAGTGGATCTTCATTTTGTCAGACAATTGTGACAGTCATGGAGCATGTAAGTAGTACTAGTATATAGTTTGAGTGTATGACTAACCCTGAATATTCATTCCTATAGTAAATAGTACTCCTATATCATATTAGAGATTCTGTGGTTGGATTAATAAGTAGTGTAGCTATATCTCCAGATGATGAATTTATATGTGTCCTTGATATGAATTAATGATATTTGTGGTGAG]
[+] EMBL AK102613 [ TCCGGCTCCGCTCGCCGCCTCCAAATCCCGCTCCTCCGCTGCTGCTCCTCTCTGCCGCGGCGAGGCGAGAGATCCGAATCCACCGCCACCCGCGCCCACCCCGCCCGCACAAACCCTAGTTTTTCCGGGGTTTTGCTTCCCCTCCGCAGCTCCGCTCCGCTCCGTCCGTCGTCTCCTCCCGGCGGCTCGGCTTGCTGTCCATGCTGTAGCCGCCCCCCGCAGGTGGCTGATGGGCTCCCAGAACCGCCCCCCACCACCGCGCAAGAGGCAGCCGCCGCCGCCGGAGGACCACCTCGTCACCTACAAGCGCCGCCGCTCCAAAGAAACACAGCCTTTGCCACTCATGGCCAACGGCGCCAATTCTAAGAAAGACGCCAAGGCCCAACATTGGATTAGCTGGAGGGACACTCTCCACGGCTTCCTCCAATCCCCTGCTATTAGCCAGGGTGGAGGAATTCAGACCTGCATCCGTCATGCTCTCCAACACAATCCTTGCTTGCTCACCAATGGTGTTGTTGTTCACACTGAATTCAAAGGTAACCCAGCTCATTCCCAAGGAGAGGAAGCAAAAGTGCAGCACCCTAATGGTGCTGCTGGAGGCAAGGTGGTTTCTGCAGATGCTGCTATACAAGATGCGGCTGCCGCAGCTTCTTCCGAAGCTAACAAGGCAATGTGTAATAATGCCCTCTTCGACATTTTGGTCTCCCAGAAATTTGCCTTGTTGTGCCATTTGCTACTTGGGACCTTCCATGTCAATAAACCTGGTGATGTCATCGACTTGGAAAAAATCGACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATCCAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAACCTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTG CA AGATCCGCAGGGCAGCGGAAGGAATGCATAAGTATGAGGATTCTGTG CTGAAAATACATGGGAATAGTAAGCATG CTTGTAATGTGAATCA GTCGAAGGA TTCTGAAGGTGATGGTACTGAAAAGTGATCATCA CA ATAGCTTTGTGGATTAGC TTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACA CCGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGTTGACATCTA CA GGAAGAACTCTTACCT GGTGAAGATGGTGTATGTAGTCTTTTAGCTGGGCGGAATGATGTGT TGT ]
[+] EMBL CF304648 [ CCAACACAATCCTTGCTTGCTCACCAATGGTGTTGTTGTTCACACTGAATTCAAAGGTAACCCAGCTCATTCCCAAGGAGAGGAAGCAAAAGTGCAGCACCCTAATGGTGCTGCTGGAGGCAAGGTGGTTTCTGCAGATGCTGCTATACAAGATGCGGCTGCCGCAGCTTCTTCCGAAGCTAACAAGGCAATGTGTAATAATGCCCTCTTCGACATTTTGGTCTCCCAGAAATTTGCCTTGTTGTGCCATTTGCTACTTGGGACCTTCCATGTCAATAAACCTGGTGATGTCATCGACTTGGAAAAAATCGACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATCCAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAACCTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTG ]
[+] EMBL CB000369 [ TCATCGACTTGGAAAAAATCGACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATCCAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAACCTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACA ]
[-] EMBL CA760210 [ GACAAGGGGTTCATGGTATGCGGCCATCCCTAGTGCGTTTACAAGTTCTATCATATACGATGCCTGAAAGCAAGTCAGCTTGCAATTGAGCAACAAAAGTAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTTCAAGACAAGGATGATGACCAGATAGTCATGTGTGAAGGCTGTGATGAAGGTTATCACATATATTGCATGAGCCCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTG CA AGATCCGCAGGGCAGCGGAAGGAATGCATAAGTTTGAGGATTTTGTG CTGAAAATTCATGGGGATAGTAAGCATG CTTGTAATGTGAATCA GTCGAAGGA TTCTGAAGGTGATGGTTCTTAAAAGTGATCATCT CA ATAGCTTTGTGGATTAGC TTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACA CCGACTTTGATGCTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGGTGACATCCA CA GGAAGGACCCATAACT GGTGAAaaaaaaa ]
[+] EMBL BQ909054 [ TACTGTACATTTTGNCANAGATCCCCAGGGCACCGGAAGGAATGCATAAGTATGAGGATTCTGTGNCTGAAAATACATGGGAATAGTAAGCATGCCTTGTAATGTGAATCACGTCGAAGGATTTCTGAAGGTGATGGTACTGAAAAGTGATCATCACCACATAGCTTTGTGGATTAGCTTTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACACCCGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGTTGACATCTACCACGGAAGAACTCTTACCTCGGTGAAGATGGTGTATGTAGTCTTTTAGCTGGGCGGAATGATGTGTCTGTGTTACTTGTTCACCTTCCTTCTTTGACCCCCTTGTCAGTGACCCTTGTGAATGTTGTCCTGTACTTGCCCTGTGATGGTATTCTTAAACACTTTTTTTTGGGGGAAATATGATTTTGTTTTTTTAAaaaaaa ]
[-] EMBL BU667160 [ TTTTG CA AGATCC CAGGGCA CGGAAGGAATGCATAAGTATGAGGATTCTGTG CTGAAAATACATGGGAATAGTAAGCATG CTTGTAATGTGAATCA GTCGAAGGA TTCTGAAGGTGATGGTACTGAAAAGTGATCATCA CA ATAGCTTTGTGGATTAGC TTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGGCCCCTTAGGAGGGCTATACA CCGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATTAACTGCCGTTGACATCTA CA ]
consensusID : consensus_11072#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1052 fasta sequence
[TGCTTTATCTTTCAATTAATGTCTCTAGCGTCGAGATGGTTATATTTTGACAATTTGAGTTAAGATAAATCTATTACTGCACACTTGGCAACCATGCTGCAATTTGCAGGATGCTTTAGTATATTGAAATCTTTCCTTTTATGCTGGGCATTACTACTGGATAAATTATTTTATAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTGCAAGATCCGCAGGGCAGCGGAAGGAATGCAT]
[+] EMBL AK102260 [TGCTTTATCTTTCAATTAATGTCTCTAGCGTCGAGATGGTTATATTTTGACAATTTGAGTTAAGATAAATCTATTACTGCACACTTGGCAACCATGCTGCAATTTGCAGGATGCTTTAGTATATTGAAATCTTTCCTTTTATGCTGGGCATTACTACTGGATAAATTATTTTATAGGCTTCTGGATTTTCTGAAGCTGAGGTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAGGAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAACGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGATGTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAGCTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTCAAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGTGGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAGCTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGGGAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGCACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAGTTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTTGGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGACCAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCACGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTGCAAGATCCGCAGGGCAGCGGAAGGAATGCAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11072#0 TTCCCGTTCCGTTATAATAAGAGGAGAGAGAGAGAGATTTTGGGTTTGTCTCCGGCTCCG 60
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CTCGCCGCCTCCAAATCCCGCTCCTCCGCTGCTGCTCCTCTCTGCCGCGGCGAGGCGAGA 120
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 GATCCGAATCCACCGCCACCCGCGCCCACCCCGCCCGCACAAACCCTAGTTTTTCCGGGG 180
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TTTTGCTTCCCCTCCGCAGCTCCGCTCCGCTCCGTCCGTCGTCTCCTCCCGGCGGCTCGG 240
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CTTGCTGTCCATGCTGTAGCCGCCCCCCGCAGGTGGCTGATGGGCTCCCAGAACCGCCCC 300
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CCACCACCGCGCAAGAGGCAGCCGCCGCCGCCGGAGGACCACCTCGTCACCTACAAGCGC 360
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CGCCGCTCCAAAGAAACACAGCCTTTGCCACTCATGGCCAACGGCGCCAATTCTAAGAAA 420
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 GACGCCAAGGCCCAACATTGGATTAGCTGGAGGGACACTCTCCACGGCTTCCTCCAATCC 480
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CCTGCTATTAGCCAGGGTGGAGGAATTCAGACCTGCATCCGTCATGCTCTCCAACACAAT 540
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CCTTGCTTGCTCACCAATGGTGTTGTTGTTCACACTGAATTCAAAGGTAACCCAGCTCAT 600
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TCCCAAGGAGAGGAAGCAAAAGTGCAGCACCCTAATGGTGCTGCTGGAGGCAAGGTGGTT 660
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TCTGCAGATGCTGCTATACAAGATGCGGCTGCCGCAGCTTCTTCCGAAGCTAACAAGGCA 720
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 ATGTGTAATAATGCCCTCTTCGACATTTTGGTCTCCCAGAAATTTGCCTTGTTGTGCCAT 780
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TTGCTACTTGGGACCTTCCATGTCAATAAACCTGGTGATGTCATCGACTTGGAAAAAATC 840
consensus_11072#1 -----------TGCTTTATCTTTCAATTAA--TGTCTCTAGCGTCGAGATGGTTATATTT 47
* ** * ***** ** ** * * **** *** * * *
consensus_11072#0 GACGCCAAGATGAGAAATGGAGACTATGCCCACAACCCTGCACTATTTGACGATGATATC 900
consensus_11072#1 --TGACAATTTGAG---TTAAGA-TAAATCTATTAC--TGCAC-ACTTGGCAAC--CATG 96
* *** **** * *** ** * * ** ***** * *** * * **
consensus_11072#0 CAGCAGATGTGGGAGAAGTTTGAGCAAGTTGGCCAAGAGATGACAGGTCTAGCGAGCAAC 960
consensus_11072#1 CTGCA-ATTTGCAGGATGCTTTAGTATATTG------AAATCTTTCCTTTTATGCTGGGC 149
* *** ** ** ** * ** ** * *** * ** * * * *
consensus_11072#0 CTTTCAACCATTTCACGAGTTTCATACCAAAAGCAGGCTTCTGGATTTTCTGAAGCTGAG 1020
consensus_11072#1 ATTACTACTGGATAAATTATTTTATA---------GGCTTCTGGATTTTCTGAAGCTGAG 200
** * ** * * *** *** *************************
consensus_11072#0 GTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAG 1080
consensus_11072#1 GTGGCTGAGCACAGAATAGAGGAAATAAGTTTGCCGGGTGCTGTCCACGTTGTCACAAAG 260
************************************************************
consensus_11072#0 GAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAA 1140
consensus_11072#1 GAGTCGACTACCACCGTGCAGTTGGCCCCATGTGATTCTAGTCATTCTACAATACCGAAA 320
************************************************************
consensus_11072#0 CGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGAT 1200
consensus_11072#1 CGAACTGTGCCACCTGGACGTGATCTGTGCCCTTGCGATGGTTGTGGCACCAAGGTAGAT 380
************************************************************
consensus_11072#0 GTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAG 1260
consensus_11072#1 GTTGAAGAAGGCCTAATCTGTGATGAATGTGACACCATGTACCACTTTGCATGTGTCAAG 440
************************************************************
consensus_11072#0 CTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTC 1320
consensus_11072#1 CTACTCAATCCTGATATTAAGCAAGTCCCAGCAATCTGGCATTGTTCAACCTGCAGCTTC 500
************************************************************
consensus_11072#0 AAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGT 1380
consensus_11072#1 AAGAAAAAAGAATTGGCTGCAGATACCACGAATAATGTTGCCCATGACTGCTTGCATGGT 560
************************************************************
consensus_11072#0 GGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAG 1440
consensus_11072#1 GGTAACTGTGTTTTGTGTGACCAGCTCGAGCTGGTGAAGACAGAAGAAGAAGATCCCAAG 620
************************************************************
consensus_11072#0 CTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGG 1500
consensus_11072#1 CTTCCCATAAAAATTGAATTAGCTGAAGAAAGAGAGGGGAGCTCCGTCTCAAGCATGGGG 680
************************************************************
consensus_11072#0 GAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGC 1560
consensus_11072#1 GAAGACAATGAACCAGACCTGTCAACAACTGCCCTGTCAAACTTGTGCAAACACTGTGGC 740
************************************************************
consensus_11072#0 ACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAG 1620
consensus_11072#1 ACATGCGAAGACGATGACAAGAGATTCATGGTATGCGGACATCCTTACTGCGTTTACAAG 800
************************************************************
consensus_11072#0 TTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTT 1680
consensus_11072#1 TTCTATCATATCCGATGCCTGAAAACAAGCCAGCTTGCAATTGAGCAACAAAAGAAGCTT 860
************************************************************
consensus_11072#0 GGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGAC 1740
consensus_11072#1 GGTTGCTGGTACTGCCCCTCTTGCCTCTGCAGAGGGTGCTTCCAAGACAAGGATGATGAC 920
************************************************************
consensus_11072#0 CAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCA 1800
consensus_11072#1 CAGATAGTCATGTGTGATGGCTGTGATGAAGGTTATCACATATATTGCATGAGACCAGCA 980
************************************************************
consensus_11072#0 CGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTGCAAGATCCGCAGGGCAGCG 1860
consensus_11072#1 CGCAACACTATCCCCAAAGGTAAGTGGTACTGTACATTTTGCAAGATCCGCAGGGCAGCG 1040
************************************************************
consensus_11072#0 GAAGGAATGCATAAGTATGAGGATTCTGTGCTGAAAATACATGGGAATAGTAAGCATGCT 1920
consensus_11072#1 GAAGGAATGCAT------------------------------------------------ 1052
************
consensus_11072#0 TGTAATGTGAATCAGTCGAAGGATTCTGAAGGTGATGGTACTGAAAAGTGATCATCACAA 1980
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TAGCTTTGTGGATTAGCTTCTGAGCTCGCTTGGACAAGCTCAGGAAAAGAGATTCTTTGG 2040
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CCCCTTAGGAGGGCTATACACCGACTTTGATACTGAATCAGTTGTGTAGTTTATTTAATT 2100
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 AACTGCCGTTGACATCTACAGGAAGAACTCTTACCTGGTGAAGATGGTGTATGTAGTCTT 2160
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TTAGCTGGGCGGAATGATGTGTTGTTTACTTGTTCACCTTCCTTCTTTACCCCCTTTCAG 2220
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TGACCATTGTGAATGTTGTCCTGTACTTGCCCTGTGATGGTATTCTTAAACGTTTTTTTG 2280
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 GGGGAAATATGATTTTGTTTTTTTAATCTCCTTTTTATTGCTTGATTCGTCATTGTTTAT 2340
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 AGCCTGTGATCGATGATTGTGAAGGTTTATAGTCTGTATGTTGTGTATGTAATGGTTTGG 2400
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TTGATCCTGAAGCTTTTTGGAGGTCTTATTTCAGTCGAGGACAAGCATGAGAGTCAAGGA 2460
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 AGAAAGTGGATCTTCATTTTGTCAGACAATTGTGACAGTCATGGAGCATGTAAGTAGTAC 2520
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TAGTATATAGTTTGAGTGTATGACTAACCCTGAATATTCATTCCTATAGTAAATAGTACT 2580
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 CCTATATCATATTAGAGATTCTGTGGTTGGATTAATAAGTAGTGTAGCTATATCTCCAGA 2640
consensus_11072#1 ------------------------------------------------------------
consensus_11072#0 TGATGAATTTATATGTGTCCTTGATATGAATTAATGATATTTGTGGTGAG 2690
consensus_11072#1 --------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||