|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11129#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2546 fasta sequence
[GAGAGAGTTAAGCTGGGCTCAGGGAGGACTAGGAGAGCAGCAGAGGCGACCGCTTGTTGTTGCTGCTGCGTTTGCGTTTCTAGGGTGTAAGCACGGGCCATCTTTCCGGTGGGAGCTTTGAATGCCAATCTTCACCACCATAGTAGTACTATCTCATTATCTCTCCCTCTGAGTCCTCTCTCGATCCGGTTCGGCTTGCTCGGGTTCGCGCAACGGAAAGGCGAGATTTTTGAGGGGATGAAGTAGTTGCCATTCTGATATCCTTCTCTATCTATCCGCTTCGACGAGCCGCGATCTCTGGGAGTTTATCTTTCAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAACCTTCGCAAGTTTTTTGGTTCCGTTTGTAGATATTAGCTAACCATAGATCAATTATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGGAGTTGCGGCTATTCCTGGCCTTGGGTCTCTTGGAGGCGTTTCCTGCGACAAATTCCTTTTCTCCTTTGCGAAATTCTACTTCAACATGTGGTTTCTACTGATCCAGGCATCCAAAGTTGGAATTTGATCACTTGTGAGGTAGCTTCTCTTCGCTTTCGTGGTTTGCCAGAATGGAGAGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGATCACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTTATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGTGGCTGCGTTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTCGCTTCAGATTGATAAGGAAAAGGCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAATTCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGCTACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAGCACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAAGCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGAAGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTGTGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACTAGGAGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGGAGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGATCCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAAGGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTGGCAACCTGATGATGACGACAATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTCACCTCTATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTTACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGCATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCTGTGGGTTGGAGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTGATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTGATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGCATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAGGTTTACAGTACCTGTATATTGTGCTACCCTTCTGCTCTCTTCTCTGTTTTTGTGAAATTTAGTAG]
[+] EMBL AK069537 [GAGAGAGTTAAGCTGGGCTCAGGGAGGACTAGGAGAGCAGCAGAGGCGACCGCTTGTTGTTGCTGCTGCGTTTGCGTTTCTAGGGTGTAAGCACGGGCCATCTTTCCGGTGGGAGCTTTGAATGCCAATCTTCACCACCATAGTAGTACTATCTCATTATCTCTCCCTCTGAGTCCTCTCTCGATCCGGTTCGGCTTGCTCGGGTTCGCGCAACGGAAAGGCGAGATTTTTGAGGGGATGAAGTAGTTGCCATTCTGATATCCTTCTCTATCTATCCGCTTCGACGAGCCGCGATCTCTGGGAGTTTATCTTTCAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAACCTTCGCAAGTTTTTTGGTTCCGTTTGTAGATATTAGCTAACCATAGATCAATTATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGGAGTTGCGGCTATTCCTGGCCTTGGGTCTCTTGGAGGCGTTTCCTGCGACAAATTCCTTTTCTCCTTTGCGAAATTCTACTTCAACATGTGGTTTCTACTGATCCAGGCATCCAAAGTTGGAATTTGATCACTTGTGAGGTAGCTTCTCTTCGCTTTCGTGGTTTGCCAGAATGGAGAGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGATCACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTTATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGTGGCTGCGTTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTCGCTTCAGATTGATAAGGAAAAGGCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAATTCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGCTACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAGCACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAAGCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGAAGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTGTGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACTAGGAGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGGAGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGATCCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAAGGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTGGCAACCTGATGATGACGACAATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTCACCTCTATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTTACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGCATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCTGTGGGTTGGAGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTGATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTGATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGCATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAGGTTTACAGTACCTGTATATTGTGCTACCCTTCTGCTCTCTTCTCTGTTTTTGTGAAATTTAGTAG]
consensusID : consensus_11129#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 610 fasta sequence
[GACGAAGGCACTTNCCCGGTGGATGGCCCCCCGAGATGNTCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCNTTTCGATGACTTAACCCCTCTCCAGGCGGNTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCT-CCAGAATGTCCAATGGCTCTGAGACCGTTGATC-GAACAGTGTTGCTCATTGCAGCCC-GAAAAGAGGCCTGATTTCTG-GCAGATTGTTAAAATCCTGGAGGAATTT-CATT-CTGTTCT-CTCCCAAGGT-GGCTGCCT-CGACT-CACTGAAGAGCAGCA-ACAGCCAGGATC-AGAAAAAGCGACT-T-CTGCATT-GGATTCAAAAGCTGAAACCCTCACATAGCACCT-GAGT-T-CCT-GT-AGTCT-CT-AGCAT-CCTTTCTGCCAGATGTTT-TTATCCGGT-TCT-GTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCGAGTAGGTTTACAGTACCTGTATATTGTGCTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU100693 [GACGAAGGCACTTNCCCGGTGGATGGCCCCCCGAGATGNTCAAGCGTAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCTCTGGAAGAATTCNTTTCGATGACTTAACCCCTCTCCAGGCGGNTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCT CCAGAATGTCCAATGGCTCTGAGACCGTTGATC GAACAGTGTTGCTCATTGCAGCCC GAAAAGAGGCCTGATTTCTG GCAGATTGTTAAAATCCTGGAGGAATTT CATT CTGTTCT CTCCCAAGGT GGCTGCCT CGACT CACTGAAGAGCAGCA ACAGCCAGGATC AGAAAAAGCGACT T CTGCATT GGATTCAAAAGCTGAAACCCTCACATAGCACCT GAGT T CCT GT AGTCT CT AGCAT CCTTTCTGCCAGATGTTT TTATCCGGT TCT GTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCGAGTAGGTTTACAGTACCTGTATATTGTGCTAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL BI798492 [ CCTCTCCA GCGGCTTATGCTGTTGCAACTAGGCATGCGCGACCAGTAATTCCTGCCAGAATGTCCTATGGCTCTGAGACCGTTGATCTGAACAGTGTTGCTCATTGCAGCCCTGAAAAGAGGCCTGATTTCTGTGCAGATTGTTAAAATCCTGGAGGAATTTGCATTGCTGTTCTGCTCCCAAGGTGGGCTGCCTGCGACTGCACTGAAGAGCAGCATACAGCCAGGATCTAGAAAAAGCGACTGTGCTGCATTGGGATTCAAAAGCTGAAACCCTCACATAGCACCTGGAGTGTGCCTCGTGAGTCTGCTGAGGATGCCTTTCTGCCAGATGTTTGTTATCCGGTGTCTGGTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAACTAGGTTTACAGTACCTGTATATTGTGCTAAAAA ]
consensusID : consensus_11129#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 425 fasta sequence
[GAACTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG]
[-] EMBL BI305482 [GAACTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG]
[-] EMBL CB966374 [GAACTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG]
[-] EMBL CB967013 [GAACTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG]
[-] EMBL BU673544 [GAACTTTTTCTCTCCGTGTTTAATTTTTCAGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGCAACAGCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG]
consensusID : consensus_11129#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 368 fasta sequence
[TGCTCGGGTTCGCGCAACGGAAAGGCGAGATTTTTGAGGGGATGAAGTAGTTGCCATTCTGATATCCTTCTCTATCTATCCGCTTCGACGAGCCGCGATCTCTGGGAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAACCTTCGCAAGTTTTTTGGTTCCGTTTGTAGATATTAGCTAACCATAGATCAATTATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGGAGTTGCGGCTATTCCTGGCCTTGGGTCTCTTGGAGGCGTTTCCTGCGACAAATTCCTTTTCTCCTTTGCGAAATTCTACTTCAACATGTGGTTTCTACTGATCCAGG]
[+] EMBL C26309 [TGCTCGGGTTCGCGCAACGGAAAGGCGAGATTTTTGAGGGGATGAAGTAGTTGCCATTCTGATATCCTTCTCTATCTATCCGCTTCGACGAGCCGCGATCTCTGGGAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAACCTTCGCAAGTTTTTTGGTTCCGTTTGTAGATATTAGCTAACCATAGATCAATTATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGGAGTTGCGGCTATTCCTGGCCTTGGGTCTCTTGGAGGCGTTTCCTGCGACAAATTCCTTTTCTCCTTTGCGAAATTCTACTTCAACATGTGGTTTCTACTGATCCAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11129#0 GAGAGAGTTAAGCTGGGCTCAGGGAGGACTAGGAGAGCAGCAGAGGCGACCGCTTGTTGT 60
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TGCTGCTGCGTTTGCGTTTCTAGGGTGTAAGCACGGGCCATCTTTCCGGTGGGAGCTTTG 120
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 --------------GACGAAGGCACTTNCCCGGTGGATGGCCCCCCGAGATGNTCAAGCG 46
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AATGCCAATCTTCACCACCATAGTAGTACTATCTCATTATCTCTCCCTCTGAGTCCTCTC 180
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 TAAGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGAT 106
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TCGATCCGGTTCGGCTTGCTCGGGTTCGCGCAACGGAAAGGCGAGAT-TTTTGAGGGGAT 239
consensus_11129#3 ----------------TGCTCGGGTTCGCGCAACGGAAAGGCGAGAT-TTTTGAGGGGAT 43
consensus_11129#1 CTCTGGAAGAATTCNTTTCGATGACTTAACCCCTCTCCAGGCGGNTTATGCTGTTGCAAC 166
consensus_11129#2 ---------------------------GAACTTTTTCTCTCCGTGTT-TAATTTTTCA-- 30
* ** * * *
consensus_11129#0 GAAGTAGTTGCCATTCTGATATCCTTCTC--TATCTATCCGCTTCGACGAGCCGCGATCT 297
consensus_11129#3 GAAGTAGTTGCCATTCTGATATCCTTCTC--TATCTATCCGCTTCGACGAGCCGCGATCT 101
consensus_11129#1 TAGGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGA-GACCGTTGATCG 225
consensus_11129#2 ---GCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGA-GACCGTTGATCG 86
* * ** * * **** * * ** * *** ** ** * ****
consensus_11129#0 CTGGGAGTTTATCTTTCAGGAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAAC 357
consensus_11129#3 CTGGGAG------------GAATCTTGAGAAGCCTATGCAATTGCTGGTTCTTCATCAAC 149
consensus_11129#1 AACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAA-ATC 284
consensus_11129#2 AACAGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAA-ATC 145
* * * *** **** * ** * ** ** * * *
consensus_11129#0 CTTCGCAAGTTT--TTTGGTTCCGTTTGTAGATA------TTAGCTAACCATAGATCAAT 409
consensus_11129#3 CTTCGCAAGTTT--TTTGGTTCCGTTTGTAGATA------TTAGCTAACCATAGATCAAT 201
consensus_11129#1 CTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGC 344
consensus_11129#2 CTGGAGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTAAAGAGCAGC 205
** * *** ** **** * ** * * ** ** *** **
consensus_11129#0 TATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGG 469
consensus_11129#3 TATAGTTTAGCCATCTTATAAACAAGCTGTTGTGAGAATTTGACTTCAGATGGGCCAAGG 261
consensus_11129#1 AACAGCCAGG--ATCAGAAAAAGCGACTTCTGCA-----TTGGATTCAAA--AGCTGAAA 395
consensus_11129#2 AACAGCCAGG--ATCAGAAAAAGCGACTTCTGCA-----TTGGATTCAAA--AGCTGAAA 256
* ** * *** * *** ** ** *** **** * ** *
consensus_11129#0 AGTTGCGGCTATTCCTGGCCTTGGGTC-TCTTGGAGGCGTTTCCTGCGACAAATTCCTTT 528
consensus_11129#3 AGTTGCGGCTATTCCTGGCCTTGGGTC-TCTTGGAGGCGTTTCCTGCGACAAATTCCTTT 320
consensus_11129#1 CCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGCATCCTTTCTGCCAGATGTTTTTAT 455
consensus_11129#2 CCCTCACATAGCACCTGAGTTCCTGTAGTCTCTAGGATCCTTTCTGCCAGATGTTTTTAT 316
* **** * ** *** ** **** * * ** * *
consensus_11129#0 TCTCCTTTGCGAAATTC-TACTTCAACATGTGGTTTCTACTG--ATCCAGGCATCCAAAG 585
consensus_11129#3 TCTCCTTTGCGAAATTC-TACTTCAACATGTGGTTTCTACTG--ATCCAGG--------- 368
consensus_11129#1 CCGGTTCTGTATGCTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAA 515
consensus_11129#2 CCGGTTCTGTATGCTCAGTAGCTTAGCATCAGATTTTCATTTTTGTTCAGAAAAGGTGAA 376
* * ** * ** * * *** * *** * * * ***
consensus_11129#0 TTGGAATTTGATCACTTGTGAGGTAGCTTCTCTTCGCTTTCGTGGTTTGCCAGAATGGAG 645
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 CCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCGAGTAGGTTTACAGTAC 575
consensus_11129#2 CCTGTGTTCTAGGATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAG----------- 425
consensus_11129#0 AGAGAGAATTCATGGCTGAGGAGAACCAAGTTCTCCCACACCGTGTACACAAGGTTGGAT 705
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 CTGTATATTGTGCTAAAAAAAAAAAAAAAAAAAAA------------------------- 610
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CACCAACGGGCGCCTATTGCTCCCCTTGGCAGGGATGTGGAGCAGAAACTGCAGAGATTT 765
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATTAGTATGGGGAAGTCTGTGTCGATGCCTGTTAACCGGGACGAGGATGCAGTGGCTGCG 825
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TTCAAGCACTCTGTGAGCTTGCCAACAGCCCGCTCCTCGCTTCAGATTGATAAGGAAAAG 885
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 GCCAACAAGCAGAAGGCAGATTTTGATATCCCTTCAAGCCCTCCGGTGAACTCTGTTAAT 945
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TCGAAGGGCCTGAAGGCAAGGAGCCTGGTCAAGAGCCCAAGCTCAGCGATGCTTCTCAGC 1005
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TACTTGAACAAGGCACACCCGAATCGAGATTCAAACCTCAAGAAGACTGACAGACCTCAG 1065
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CACAAGCTGAGATCAAAGTCCCCTCTTCCGAATGTAGCGCCTTCTGATGTGTTCAGAGAA 1125
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 GCACGTGCAAGTAGCAGGAGGTTTACAAGCCCTCCCCCAAAGCGAAGGGGATCTGAAAGA 1185
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGCATTTACGGCAAATCGTTTGATAGACAACTGTCTGATATGAGCCAAAGCCCTGATTTG 1245
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TGTTCAACCCCAGTGTCCTCTGATAAGCACAAGTCTCTAAAGGATAGCTCATGGACTAGG 1305
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGATATTTTGATAATGGTGGAAGGAGGAGGGTTAGTGCAGTGGACGCTACTGAAGTTCGG 1365
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGGAACCGCGGGGTTAGTATGGCTCAGGCAGTTCAAACTACAGTTGATTGGACACTTGAT 1425
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CCATCTAAGCTGCTCGTGGGGCATAAGTTTGCATCTGGGGCATATAGCCGGCTCTACAAA 1485
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 GGACTCTATGATGATAAACCAGTTGCCATTAAATTTATTGGCAACCTGATGATGACGACA 1545
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATGGGAAGATGGCTGCAAAACTTGAAAAACAGTATAACAGTGAGGTCAATGCTCTATCTC 1605
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ACCTCTATCACAAGAATGTGATCAAGCTAGTAGCAGCCTATAAATGCCCACCAGTTTTTT 1665
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ACATAATTACTGAGTTCCTCCCTGGAGGTTCCCTGAGGTCATATCTAAATAGCACAGAGC 1725
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATCACCCCATCCCTCTGGAGAAGATCATATCCATTGCTCTCGATGTTGCCTGTGGGTTGG 1785
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGTACATTCACTCTCAAGGGGTCGTGCACCGTGACATTAAGCCAGAGAACATTCTCTTTG 1845
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATGAGAACTTCTGTGTAAAGATTGCTGATTTTGGGATTGCCTGTGAGGAGTCAATGTGTG 1905
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATGTGCTGGTGGAAGACGAAGGCACTTACCGGTGGATGGCCCCCGAGATGATCAAGCGTA 1965
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGGCATACAACCGGAAGGTCGACGTCTATAGCTTTGGACTACTCCTATGGGAAATGATCT 2025
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CTGGAAGAATTCCTTTCGATGACTTAACCCCTCTCCAGGCGGCTTATGCTGTTGCAACTA 2085
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 GGCATGCGCGACCAGTAATTCCTCCAGAATGTCCAATGGCTCTGAGACCGTTGATCGAAC 2145
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGTGTTGCTCATTGCAGCCCGAAAAGAGGCCTGATTTCTGGCAGATTGTTAAAATCCTGG 2205
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 AGGAATTTCATTCTGTTCTCTCCCAAGGTGGCTGCCTCGACTCACTGAAGAGCAGCAACA 2265
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 GCCAGGATCAGAAAAAGCGACTTCTGCATTGGATTCAAAAGCTGAAACCCTCACATAGCA 2325
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CCTGAGTTCCTGTAGTCTCTAGCATCCTTTCTGCCAGATGTTTTTATCCGGTTCTGTATG 2385
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 CTCAGTAGCTTAGCATAAGATTTTCATTTTTGTTCAGAAAAGGTGAACCTGTGTTCTAGG 2445
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 ATGCTTGGACATGTTTATCAGGTGAATTGCAAGTAGGTTTACAGTACCTGTATATTGTGC 2505
consensus_11129#3 ------------------------------------------------------------
consensus_11129#1 ------------------------------------------------------------
consensus_11129#2 ------------------------------------------------------------
consensus_11129#0 TACCCTTCTGCTCTCTTCTCTGTTTTTGTGAAATTTAGTAG 2546
consensus_11129#3 -----------------------------------------
consensus_11129#1 -----------------------------------------
consensus_11129#2 -----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||