cluster # 11142

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Oryza sativa
cluster # 11142 cluster # 11142 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11142#0 length = 2198 sequences # 8
consensusID : consensus_11142#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2198
fasta sequence
                              [GTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATA-GTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTTTACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATATCTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTAACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGTATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTGCATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCTGTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAGTGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGTGGGTTGATCACTGANNAAAAAAAAA]

[+] EMBL AK102851             [GTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATA GTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTTTACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATATCTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTAACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGTATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTGCATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCTGTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAGTGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTA                           ]
[+] EMBL CB639153             [                        CGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATAGGTGGATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU173103             [                               TGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF307372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATCTGTATTGAGAAGTGCTTTTGGAACTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB639154             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGTTCTGCTCAGAAT AAAGTTCTTGGct                                                                                                                                           ]
[+] EMBL AU173104             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCAaaaaaaaa                                                                                                                                                                                    ]
[+] EMBL CF330157             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGTGGGTTGATCACTGANNAAAAAAAA ]
[-] EMBL CF330156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATTTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATTTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATTTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTTTTGGTTGGAGAATTGCCATGTCTTTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGT GGTTGATCCCTGAAAAAAAAAAAA]




>consensus_11142#0
GTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCG
AAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCG
CTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGA
GGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATC
ATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCT
CTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAA
TGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTC
TGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAA
TGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATAG
TGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTTTACTCTGGG
CATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATATCTGCAGATA
AAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTAACTGTCCTG
AATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCC
TTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGTATTCAAGCT
CCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTGCATGCACCT
AATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCTGTTGTAGTT
GAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGCATAGTAAGA
CTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTA
TTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCC
TCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGT
ATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTG
AATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCT
GTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGT
ATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCG
ATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAGTGCTTTTGG
AACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACTTTCAGAGAA
CTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAA
GATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGAT
TTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCT
TTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGC
AAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTC
ATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCT
TGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATC
TAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTC
AGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGA
AGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAA
ATATAATACTAGTGGGTTGATCACTGANNAAAAAAAAA
clustalw multiple alignements is not computed in this case