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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11144#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2156 fasta sequence
[ATCACCAGCTGCCACTCTCAAGAACCTGACTTTGGATCGCTATCCCTTTTGCTTCTTATTAGTGCTCAGGGAAAGAAAGCTATAGCAGTAGCTAAATAAGCCAGAGAGAGGCTAAGAGAGAGAGAGGTGAGGGGAGAGAAGAAATCCTCGCAGAATTCGAGCAAGAACCGAGGGAGATCGATCGCCTCTTGTCCTCGTTCCGAGGCAGAGATCGACCTGAAGTGAGCTGAGCTGCGGCAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATGATGAGGGATGTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCAGGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGCCGCCGGCGGCGCGTTCACACTGCAGTGGGATGGCGCCCATGGCGTCGGGGACTTCAGGAACGCGTACCGGTTCGGCGGCGGCGGCGGCGGGAAGCGGCACTTCGGCCGTACGCCGGAGCAGGAGAGGAAGAAAGGCGTGCCATGGACGGAGGAGGAGCACAAGTTGTTCCTCTTAGGACTGAAGAAATATGGGAAAGGGGATTGGAGGAACATATCCCGCAATTTCGTGCAGACGAGGACGCCGACGCAGGTTGCCAGCCATGCGCAGAAGTATTTCATCAGGCTCAACTCCGGTGGCAAGGACAAGAGGAGATCCAGCATCCATGACATTACCACGGTTAACCTGACGGATGACCGGCCTCCCTCGCCATCACAGTCCTCCTTGATCAGCAATCAGTCCAACACATCAACTCTGACCGCAGCGGTTGCCCCCTTCTCATCGACGGCCGATGTCAAGCCACAGAATGCCGCGAATGCGTCCTTCAATTCGCCAAGCCGGACACTT-GGGATGGC-GGGTTACGGGA-TGGGATTGCAAGATCAAGGA-TTGCAGTG-TGGTGGTCCTCTACATGATCAGTTGGCCGCGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATCAGATGTCTAGTGTAATATTGCCCTGCTTGTAGCTTCATCACTACCTGTATTGAAGTAATTAATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGTGCCATGTTGGTGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAACGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTGCTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGAGGTGGATGAGGAGAATTCTATTCACTATGTTCTTCTGGTCAGTGATGCACTGAGAAACACCGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACAGTTCTATCAATTTGCTCATTGGTGCTCCCCCCATTTGATGTTTGCATAGAATTTATTTGGATAAACGGAAAATAAGTTTGCTCTGAGTCATTCAGCATTATTACTACTTTCAGTTGCTCATCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACTTCTTTTTTTTAATTCTGTTGCTTGACCTTTGGTTGTTTGTGTGCAATTAAGTCCTATACTGTATTCTTCTGTGGCTCTATTGATGATGCTACTTCCACCAAAAATGAGATTGGTAATGAGTCAGAGTTGCACTAACTTGGCATCTCATGCTTTCTCTGCCCCCTTTTCCATCAACTTTATAATTCTTTTTTCCCCCTTCTTTTTGGCCCTGTTATTATTTCCCTCCTTGAGAAAGGCATCTCAGATATGAGACAGATTTTTGTGACAACAGTAAAGAATAGATCAGGGAGCAGCATTGAAAATGCCCAAATGTTGCCTACTCCTTCCTTCCCAAATGTAGTTATTTTTGGAGTTCAAATTTGTGGTAAAATGTAATTATT]
[+] EMBL AK067964 [ATCACCAGCTGCCACTCTCAAGAACCTGACTTTGGATCGCTATCCCTTTTGCTTCTTATTAGTGCTCAGGGAAAGAAAGCTATAGCAGTAGCTAAATAAGCCAGAGAGAGGCTAAGAGAGAGAGAGGTGAGGGGAGAGAAGAAATCCTCGCAGAATTCGAGCAAGAACCGAGGGAGATCGATCGCCTCTTGTCCTCGTTCCGAGGCAGAGATCGACCTGAAGTGAGCTGAGCTGCGGCAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATGATGAGGGATGTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCAGGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGCCGCCGGCGGCGCGTTCACACTGCAGTGGGATGGCGCCCATGGCGTCGGGGACTTCAGGAACGCGTACCGGTTCGGCGGCGGCGGCGGCGGGAAGCGGCACTTCGGCCGTACGCCGGAGCAGGAGAGGAAGAAAGGCGTGCCATGGACGGAGGAGGAGCACAAGTTGTTCCTCTTAGGACTGAAGAAATATGGGAAAGGGGATTGGAGGAACATATCCCGCAATTTCGTGCAGACGAGGACGCCGACGCAGGTTGCCAGCCATGCGCAGAAGTATTTCATCAGGCTCAACTCCGGTGGCAAGGACAAGAGGAGATCCAGCATCCATGACATTACCACGGTTAACCTGACGGATGACCGGCCTCCCTCGCCATCACAGTCCTCCTTGATCAGCAATCAGTCCAACACATCAACTCTGACCGCAGCGGTTGCCCCCTTCTCATCGACGGCCGATGTCAAGCCACAGAATGCCGCGAATGCGTCCTTCAATTCGCCAAGCCGGACACTT GGGATGGC GGGTTACGGGA TGGGATTGCAAGATCAAGGA TTGCAGTG TGGTGGTCCTCTACATGATCAGTTGGCCGCGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATCAGATGTCTAGTGTAATATTGCCCTGCTTGTAGCTTCATCACTACCTGTATTGAAGTAATTAATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGTGCCATGTTGGTGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAACGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTGCTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGAGGTGGATGAGGAGAATTCTATTCACTATGTTCTTCTGGTCAGTGATGCACTGAGAAACACCGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACAGTTCTATCAATTTGCTCATTGGTGCTCCCCCCATTTGATGTTTGCATAGAATTTATTTGGATAAACGGAAAATAAGTTTGCTCTGAGTCATTCAGCATTATTACTACTTTCAGTTGCTCATCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACT ]
[+] EMBL AU108180 [ TGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCAGGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGCCGCCGGCGGCGCGTTCACACTGCAGTGGGATGGCGCCCATGGCGTCGGGGACTTCAGGAACGCGTACCGGTTCGGCGGCGGCGGCGGCGGGAAGCGGCACTTCGGCCGTACGCCGGAGCAGGAGAGGAAGAAAGGCGTGCCATGGACGGAGGAGGAGCACAAGTTGTTCCTCTTAGGACTGAAAAAAaaaa ]
[+] EMBL OS1321769 [ TGCCATGGACGGAGGAGGAGCACAAGTTGTTCCTCTTAGGACTGAAGAAATATGGGAAAGGGGATTGGAGGAACATATCCCGCAATTTCGTGCAGACGAGGACGCCGACGCAGGTTGCCAGCCATGCGCAGAAGTATTTCATCAGGCTCAACTNCGGTGGCAAGGACAAGAGGAGATCCAGCATCCATGACATTACCACGGTTAACCTGACGGATGACCGGCCTCCCTCGCCATCACAGTCCTCCTTGATCAGCAATCAGTCCAACACATCAACTCTGACCGCAGCGGTTGCCCCCTTCTCATCGACGGCCGATGTCAAGNCACAGAATGCCGCGAATGGNTCCTTCAATTCGCCAAGCCGGACACTTGGGGATGGCGGGGTTACGGGATTGGGATTGNAAGATCAAGGATTTGCAGTGTTGGTGGTCCTCTACAT ]
[-] EMBL CB682386 [ AACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTGCTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGAGGTGGATGAGGAGAATTCTATTCACTATGTTCTTCTGGTCAGTGATGCACTGAGAAACACCGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACAGTTCTATCAATTTGCTCATTGGTGCTCCCCCCATTTGATGTTTGCATAGAATTTATTTGGATAAACGGAAAATAAGTTTGCTCTGAGTCATTCAGCATTATTACTACTTTCAGTTGCTCATCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACTTCTTTTTTTTAATTCTGTTGCTTGACCTTTGGTTGTTTGTGTGCAATTAAGTCCTATACTGTATTCTTCTGTGGCTCTATTGATGATGCTACTTCCACCAAAAATGAGATTGGTAATGAGTCAGAGTTGCACTAACTTGGCATCTCATGCTTTCTCTGCCCCCTTTTCCATCAACTTTATAATTCTTTTTTCCCCCTTCTTTTTGGCCCTGTTATTATTTCCCTCCTTGAGAAAGGCATCTCAGATATGAGACAGATTTTTGTGACAACAGTAAAGAATAGATCAGGGAGCAGCATTGAAAATGCCCAAATGTTGCCTACTCCTTCCTTCCCAAATGTAGTTATTTTTGGAGTTCAAATTTGTGGTAAAATGTAATTATT]
consensusID : consensus_11144#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 716 fasta sequence
[GCAAGCTTCGAGGGAGATCGATCGCCTCTTGTCCTCGGTCCGAGGCAGAGATCGACCTGAAGTGAGCTGAGCTGCGGCAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATGATGAGGGATGTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCA-GGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGGAAAAGTTGACTAGATGAGCAACTGAAAGTAGTAATAATGCTGAATGACTCAGAGCAAACTTATTTTCCGTTTATCCAAATAAATTCTATGCAAACATCAAATGGGGGGAGCACCAATGAGCAAATTGATAGAACTGTGGATAAGTATGTGTGAAGTACAGCATGATCTGAAACCCCTCAATCAGATGGCAACCGGTGTTTCTCAGTGCATCACTGACCAGAAGAACATAGTGAATAGAATTCTCCTCATCCACCTCACAAAAGCTGGATCCATGATTGAATACAAAGTCCACTTCATGCATGATCAGTGTTCAGCAC]
[+] EMBL CB682385 [GCAAGCTTCGAGGGAGATCGATCGCCTCTTGTCCTCGGTCCGAGGCAGAGATCGACCTGAAGTGAGCTGAGCTGCGGCAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATGATGAGGGATGTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCA GGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGGAAAAGTTGACTAGATGAGCAACTGAAAGTAGTAATAATGCTGAATGACTCAGAGCAAACTTATTTTCCGTTTATCCAAATAAATTCTATGCAAACATCAAATGGGGGGAGCACCAATGAGCAAATTGATAGAACTGTGGATAAGTATGTGTGAAGTACAGCATGATCTGAAACCCCTCAATCAGATGGCAACCGGTGTTTCTCAGTGCATCACTGACCAGAAGAACATAGTGAATAGAATTCTCCTCATCCACCTCACAAAAGCTGGATCCATGATTGAATACAAAGTCCACTTCATGCATGATCAGTGTTCAGCAC]
[+] EMBL OSC100 [ GTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCAAGTNGTCGCCGGA GAGAACAAGCAGTTCGAGCGGGCGCTC CCGGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCG CATCCC GGCANGGTCGGCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAG ]
consensusID : consensus_11144#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 605 fasta sequence
[AGAGGACAAGACAAGCCGGACACTTGGGATGGCGGGTTACGGGATGGGATTGCAAGATCAAGGATTGCAGTGTGGTGGTCCTCTACATGATCAGTTGGCCCGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATNAGATGTCTAGTGTAATATTGCCCTGCTGGTAGCTTCATCACTACCTGTATTGAAGTAATTAATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGTGCCATGTTGGTGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAACGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTGCTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGAGGTGGATGAGGAGAACTCTATTCACTATGTTTTTCTGGTCAGTGATGCACTGAGAAACACCGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACAGTTCTATCAATTTGCTCATTGGTGCTAAAAAAAAAAAAAAA]
[-] EMBL CA763018 [AGAGGACAAGACAAGCCGGACACTTGGGATGGCGGGTTACGGGATGGGATTGCAAGATCAAGGATTGCAGTGTGGTGGTCCTCTACATGATCAGTTGGCCCGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATNAGATGTCTAGTGTAATATTGCCCTGCTGGTAGCTTCATCACTACCTGTATTGAAGTAATTAATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGTGCCATGTTGGTGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAACGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTGCTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGAGGTGGATGAGGAGAACTCTATTCACTATGTTTTTCTGGTCAGTGATGCACTGAGAAACACCGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACAGTTCTATCAATTTGCTCATTGGTGCTAAAAAAAAAAAAAAA]
consensusID : consensus_11144#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 141 fasta sequence
[CTCATCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACTTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF330110 [CTCATCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACTTCTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11144#0 ATCACCAGCTGCCACTCTCAAGAACCTGACTTTGGATCGCTATCCCTTTTGCTTCTTATT 60
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AGTGCTCAGGGAAAGAAAGCTATAGCAGTAGCTAAATAAGCCAGAGAGAGGCTAAGAGAG 120
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AGAGAGGTGAGGGGAGAGAAGAAATCCTCGCAGAATTCGAGCAAGAACCGAGGGAGATCG 180
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 ATCGCCTCTTGTCCTCGTTCCGAGGCAGAGATCGACCTGAAGTGAGCTGAGCTGCGGCAA 240
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATGATGAGGGATGTGTGCA 300
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 TGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAACTGGTTCATGGCGCGCA 360
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCCGGGCTGGACCTGCGGT 420
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCAGGTCGGCGCTCGAGGTCATGA 480
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 ACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAATGGCATGGTGCCCTTCC 540
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 CGGTCTACGGCGCCGCCGCCGCCGGCGGCGCGTTCACACTGCAGTGGGATGGCGCCCATG 600
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GCGTCGGGGACTTCAGGAACGCGTACCGGTTCGGCGGCGGCGGCGGCGGGAAGCGGCACT 660
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 TCGGCCGTACGCCGGAGCAGGAGAGGAAGAAAGGCGTGCCATGGACGGAGGAGGAGCACA 720
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AGTTGTTCCTCTTAGGACTGAAGAAATATGGGAAAGGGGATTGGAGGAACATATCCCGCA 780
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 ATTTCGTGCAGACGAGGACGCCGACGCAGGTTGCCAGCCATGCGCAGAAGTATTTCATCA 840
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GGCTCAACTCCGGTGGCAAGGACAAGAGGAGATCCAGCATCCATGACATTACCACGGTTA 900
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 ACCTGACGGATGACCGGCCTCCCTCGCCATCACAGTCCTCCTTGATCAGCAATCAGTCCA 960
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 --------------------------------------------------------GCAA 4
consensus_11144#0 ACACATCAACTCTGACCGCAGCGGTTGCCCCCTTCTCATCGACGGCCGATGTCAAGCCAC 1020
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 GCTTCGAGGGAGATCGATCGCCTCTTGTCCTCGGTCCGAGGCAGAGATCGACCTGAAGTG 64
consensus_11144#0 AGAATGCCGCGAATGCGTCCTTCAATTCGCCAAGCCGGACACTTGGGATGGCGGGTTACG 1080
consensus_11144#2 -------------------AGAGGACAAGACAAGCCGGACACTTGGGATGGCGGGTTACG 41
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 AGCTGAGCTGCGGCAAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGATTGGAGATGATG 124
consensus_11144#0 GGATGGGATTGCAAGATCAAGGATTGCAGTGTGGTGGTCCTCTACATGATCAGTTGGCCG 1140
consensus_11144#2 GGATGGGATTGCAAGATCAAGGATTGCAGTGTGGTGGTCCTCTACATGATCAGTTGGCC- 100
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ATGAGGGATGTGTGCATGGAGGTGCTGCCTCCGATGGACCACTACGCGTCGAGGGGGAAC 184
consensus_11144#0 CGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATCAGATGTC 1200
consensus_11144#2 CGAGCCGAAGCATATTGTTTTAGATGAAACCAATCCAGGCAGCACCATGGATNAGATGTC 160
consensus_11144#3 ------------------------------------------------------CTCATC 6
consensus_11144#1 TGGTTCATGGCGCGCAAGTGGTCGCCGGAGGAGAACAAGCAGTTCGAGCGGGCGCTCGCC 244
*
consensus_11144#0 TAGTGTAATAT----TGCCCTGCTTGTAGCTTCAT------CACTACCTGTATTGAAGTA 1250
consensus_11144#2 TAGTGTAATAT----TGCCCTGCTGGTAGCTTCAT------CACTACCTGTATTGAAGTA 210
consensus_11144#3 TAGTCAACTTT----T--CTTGTTTGTAGCTTCAT------TTTTA----TAATAAAATA 50
consensus_11144#1 GGGCTGGACCTGCGGTGCCCGGACTGGGACCGGGTGGCGCGCGCCATCCCGGGCAGGTCG 304
* * * * * * * * *
consensus_11144#0 ATT----AATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGT 1306
consensus_11144#2 ATT----AATTATGGGGAATTTTTCGGAACATAACAGAGGGGGTGTGGAGGGATCTTTGT 266
consensus_11144#3 ATA----ACTTCTT-----TTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 101
consensus_11144#1 GCGCTCGAGGTCATGAACCACTTCAGGGACCTCGAGCTCGACGTCCAGCAGATCGAGAAT 364
* * ** *
consensus_11144#0 GCCATGTTGG--TGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAA 1364
consensus_11144#2 GCCATGTTGG--TGACTGATAACCTGTGATCCATAATTGTTGGCAATACTGAGAATGTAA 324
consensus_11144#3 AAAAAAAAAA--AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------------ 141
consensus_11144#1 GGCATGGTGCCCTTCCCGGTCTACGGCGCCGCCGGAAAAGTTGACTAGATGAGCAACTGA 424
* *
consensus_11144#0 CGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTG 1424
consensus_11144#2 CGAAACGAACGTCAAGAACTTGATGCCGGTGGTATTTTCAGACAGTGATTGCTGCTAGTG 384
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 AAGTAGTAATAATGCTGAATGACTCAGAGCAAACTTATTTTCCGTTTATCCAAATAAATT 484
consensus_11144#0 CTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGA 1484
consensus_11144#2 CTGAACACTGATCATGCATGAAGTGGACTTTGTATTCAATCATGGATCCAGCTTTTGTGA 444
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 CTATGCAAACATCAAATGGGGGGAGCACCAATGAGCAAATT---GATAGAACTGTGGATA 541
consensus_11144#0 GGTGGATGAGGAGAATTCTATTCACTATGTTCTTCTGGTCAGTGATGCACTGAGAAACAC 1544
consensus_11144#2 GGTGGATGAGGAGAACTCTATTCACTATGTTTTTCTGGTCAGTGATGCACTGAGAAACAC 504
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 AGTATGTGTGAAGTACAGCATGATCTGAAACCCCTCAATCAGATGGCAACCGGTGTTTCT 601
consensus_11144#0 CGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACA 1604
consensus_11144#2 CGGTTGCCATCTGATTGAGGGGTTTCAGATCATGCTGTACTTCACACATACTTATCCACA 564
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 CAGTGCATCACTGACCAGAAGAACATAGTGAATAGAATTCTCCTCATCCACCTCACAAAA 661
consensus_11144#0 GTTCTATCAATTTGCTCATTGGTGCTCCCCCCATTTGATGTTTGCATAGAATTTATTTGG 1664
consensus_11144#2 GTTCTATCAATTTGCTCATTGGTGCTAAAAAAAAAAAAAAA------------------- 605
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 GCTGGATCCATGATTGAATACAAAGTCCACTTCATGCATGATCAGTGTTCAGCAC----- 716
consensus_11144#0 ATAAACGGAAAATAAGTTTGCTCTGAGTCATTCAGCATTATTACTACTTTCAGTTGCTCA 1724
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 TCTAGTCAACTTTTCTTGTTTGTAGCTTCATTTTTATAATAAAATAATAACTTCTTTTTT 1784
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 TTAATTCTGTTGCTTGACCTTTGGTTGTTTGTGTGCAATTAAGTCCTATACTGTATTCTT 1844
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 CTGTGGCTCTATTGATGATGCTACTTCCACCAAAAATGAGATTGGTAATGAGTCAGAGTT 1904
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GCACTAACTTGGCATCTCATGCTTTCTCTGCCCCCTTTTCCATCAACTTTATAATTCTTT 1964
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 TTTCCCCCTTCTTTTTGGCCCTGTTATTATTTCCCTCCTTGAGAAAGGCATCTCAGATAT 2024
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 GAGACAGATTTTTGTGACAACAGTAAAGAATAGATCAGGGAGCAGCATTGAAAATGCCCA 2084
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AATGTTGCCTACTCCTTCCTTCCCAAATGTAGTTATTTTTGGAGTTCAAATTTGTGGTAA 2144
consensus_11144#2 ------------------------------------------------------------
consensus_11144#3 ------------------------------------------------------------
consensus_11144#1 ------------------------------------------------------------
consensus_11144#0 AATGTAATTATT 2156
consensus_11144#2 ------------
consensus_11144#3 ------------
consensus_11144#1 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||