cluster # 11218

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Oryza sativa
cluster # 11218 cluster # 11218 Sequences # 8 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11218#0 length = 1109 sequences # 5
consensus_11218#1 length = 483 sequences # 1

consensus_11218#2 length = 329 sequences # 1
consensus_11218#3 length = 289 sequences # 1

consensusID : consensus_11218#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1109
fasta sequence

                              [CGCCGCCGCCGCCGCAACACCAAGAAGATGGCGGCGGACTCGCTGGACATGTCCCTCGACGACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGATCCAGCGCCCTCTGCCCGCCGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCCCTATCACGCCATCACCTTTCAGGTATAGTTTCTCTTTCTTTTTCTTGATTTGTCGCCCGGCCCGACGACCACGATCTACTCACTAGGGTTTCTGCCTAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGAGACCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAAGGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTGGAAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTAAGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTAT-TTTTGGTTTCGCTGCACCAGCTGGATACTTCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAAGCAAGCATGCAGCTTGGCAGCCTGGCAAGAGGAT]

[+] EMBL CF315149             [CGCCGCCGCCGCCGCAACACCAAGAAGATGGCGGCGGACTCGCTGGACATGTCCCTCGACGACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGATCCAGCGCCCTCTGCCCGCCGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCCCTATCACGCCATCACCTTTCAGGTATAGTTTCTCTTTCTTTTTCTTGATTTGTCGCCCGGCCCGACGACCACGATCTACTCACTAGGGTTTCTGCCTAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGAGACCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAAGGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAAGAGTGGAAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTTAAGAGATACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTATGTTTTGGTTTCGCTGCACCAGCTGGATACTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AK068452             [                                                                                                                                                                                                                                                                                                                                                                   CAAGGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTGGAAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTAAGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTAT TTTTGGTTTCGCTGCACCAGCTGGATACTTCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAAGCAAGCATGCAGCTTGGCAGCCTGGCAAGAGGAT]
[+] EMBL AK061492             [                                                                                                                                                                                                                                                                                                                                                                   CAAGGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTGGAAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTAAGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTAT TTTTGGTTTCGCTGCACCAGCTGGATACTTCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAAGCAAGCATGCAGCTTGGCAGCCTGGCAAGAGGAT]
[+] EMBL OS0562A              [                                                                                                                                                                                                                                                                                                                                                                   CAAGGAACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTNGAAGATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTAAGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCANCTGCTAT TTTTGGTTTCGCTGCACCAGCTGGATACTTCGATTTTCCT CCAAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CA763259             [                                                                                                                                                                                                                                                                                                                                                                                                                              gaggtcgcgCCAAGGCGCCTCGAGAGGTGGTATTTTCCAGAAAATCTGATGCCCTGGTGGCTGTTAAGAGATCCAACAATGTGCAGCGGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCCCTTGCTAT GTTTGGTTTCCCTGCACCAGCCGGATACTTCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGCCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGCCCCAAAAAAAAAaaa                               ]




>consensus_11218#0
CGCCGCCGCCGCCGCAACACCAAGAAGATGGCGGCGGACTCGCTGGACATGTCCCTCGAC
GACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGATCCAGCGCCCTCTGCCCGC
CGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCCCTATCACGCCATCACCTTT
CAGGTATAGTTTCTCTTTCTTTTTCTTGATTTGTCGCCCGGCCCGACGACCACGATCTAC
TCACTAGGGTTTCTGCCTAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGAGA
CCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAAGG
AACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTGGAA
GATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTA
AGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAA
ATATTGAGCCACCACCACCTGCTATTTTTGGTTTCGCTGCACCAGCTGGATACTTCGATT
TTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGGGCGTG
GTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTG
CTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGA
TGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACT
AGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATAT
GTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGT
AGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGC
TAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAAGCAAG
CATGCAGCTTGGCAGCCTGGCAAGAGGAT

consensusID : consensus_11218#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 483
fasta sequence

                              [AACTTGAGCCNCATTGGGTATAAATAATTGANCCACCCACCACCTGCTATTTTTGGTTTCGCTGCACCAGCTGGATACTTCCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGNCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATAAAAAAAAAAAAAAAA]

[+] EMBL C98074               [AACTTGAGCCNCATTGGGTATAAATAATTGANCCACCCACCACCTGCTATTTTTGGTTTCGCTGCACCAGCTGGATACTTCCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGNCCTCGGGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATAAAAAAAAAAAAAAAA]




>consensus_11218#1
AACTTGAGCCNCATTGGGTATAAATAATTGANCCACCCACCACCTGCTATTTTTGGTTTC
GCTGCACCAGCTGGATACTTCCGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGNCCTCG
GGGCAGGGGTGGATTTGGTGGGCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGG
AGACCGTGGAAGTCGGAAGATTTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCA
TGCGGAAGGAATGCAAATGAGCTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGC
ATTAGGTAGAGACAGGGGGACAAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTT
GTAGGGATAGATGCAGACCAACATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAG
CAGGGAATGGCTAAGCTTAACCTGGTAGGTAGAAGCTAGCTCATAATAAAAAAAAAAAAA
AAA

consensusID : consensus_11218#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence

                              [CAGAGGNTGNATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTTAAGAGATACANCAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTATGATTTTCCTCCCAAAAGACAGAGNTTNNNTTTTNACCAGTAAAGTTTGTACAATGGGGTTCTGACANGANGGGGNTTNAAAAGCGCCCCCCCCTTGGAAAATCTTGCCGTACTTTTGAGACANANGNNGAGNTTATGCCAAGANAAAAAAANAAAANTANAAAATTTT]

[+] EMBL CA766403             [CAGAGGNTGNATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTTAAGAGATACANCAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCACCACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTATGATTTTCCTCCCAAAAGACAGAGNTTNNNTTTTNACCAGTAAAGTTTGTACAATGGGGTTCTGACANGANGGGGNTTNAAAAGCGCCCCCCCCTTGGAAAATCTTGCCGTACTTTTGAGACANANGNNGAGNTTATGCCAAGANAAAAAAANAAAANTANAAAATTTT]




>consensus_11218#2
CAGAGGNTGNATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTTAAGAGATACANCAATG
TGCAGCTGGATGGCAAACCTATGAAACTTGAGCTCATTGGTATAAATATTGAGCCACCAC
CACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTATGATTTTCCTCCCAAAAGAC
AGAGNTTNNNTTTTNACCAGTAAAGTTTGTACAATGGGGTTCTGACANGANGGGGNTTNA
AAAGCGCCCCCCCCTTGGAAAATCTTGCCGTACTTTTGAGACANANGNNGAGNTTATGCC
AAGANAAAAAAANAAAANTANAAAATTTT

consensusID : consensus_11218#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 289
fasta sequence

                              [TAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGAAAAAACAAAAACCCACTGAAGGGCCATTCCGTGGCCAAGGGCAAATTCCCGCCCTATAAATACAATTCCCCCAATAGAGAGGCCTTTTACAATCAACGGCCCGACTGTTAAAACCCTGGGGATGGGAAAATCCTTGGCTTTCCCCAACTTACCCCTTTTGCCACCTATCCCCT]

[+] EMBL CF318001             [TAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGAAAAAACAAAAACCCACTGAAGGGCCATTCCGTGGCCAAGGGCAAATTCCCGCCCTATAAATACAATTCCCCCAATAGAGAGGCCTTTTACAATCAACGGCCCGACTGTTAAAACCCTGGGGATGGGAAAATCCTTGGCTTTCCCCAACTTACCCCTTTTGCCACCTATCCCCT]




>consensus_11218#3
TAATATGTAACACGGAGGGAGCACAACTTTGAACTTTTATAGCTAGTGTTGAACTTTTAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGAAAAA
ACAAAAACCCACTGAAGGGCCATTCCGTGGCCAAGGGCAAATTCCCGCCCTATAAATACA
ATTCCCCCAATAGAGAGGCCTTTTACAATCAACGGCCCGACTGTTAAAACCCTGGGGATG
GGAAAATCCTTGGCTTTCCCCAACTTACCCCTTTTGCCACCTATCCCCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11218#0      CGCCGCCGCCGCCGCAACACCAAGAAGATGGCGGCGGACTCGCTGGACATGTCCCTCGAC 60
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      GACCTCATCACCAACAAGTACAAGCGCCGCTCCCGTCCAGATCCAGCGCCCTCTGCCCGC 120
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      CGCTTCCACTCCCGCGCCGCCACCCGCGCTGCTGCCGCTCCCTATCACGCCATCACCTTT 180
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      CAGGTATAGTTTCTCTTTCTTTTTCTTGATTTGTCGCCCGGCCCGACGACCACGATCTAC 240
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      TCACTAGGGTTTCTGCCTAGGCGCCGCCCACGGCCTACACCCACCCGACGCCCGTCGAGA 300
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      CCGGCACCAAGCTCCACATCTCCAACCTCGACTACGCCGTCTCCAATGAGGACATCAAGG 360
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      AACTCTTCTCTGAGGTTGGCGATGTCAAGCGTTACTCTATTAACTATGACAGGAGTGGAA 420
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      GATCCAAGGGAACTGCAGAGGTTGTATTTTCCAGAAAATCTGACGCCCTGGCTGCTGTTA 480
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ---------------CAGAGGNTGNATTTTCCAGAAAATCTGATGCCCTGGCTGCTGTTA 45
consensus_11218#3      ---------------------------------------------TAATATGTAACACGG 15
                                                                                   

consensus_11218#0      AGAGGTACAACAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGC-TCATTGG-TAT 538
consensus_11218#1      ---------------------------------------AACTTGAGCCNCATTGGGTAT 21
consensus_11218#2      AGAGATACANCAATGTGCAGCTGGATGGCAAACCTATGAAACTTGAGC-TCATTGG-TAT 103
consensus_11218#3      AGGGA-GCACAACTTTGAACTTTTATAGCTAG--TGTTGAACTTTTAAAAAAAAAAAAAA 72
                                                              *****       *      * 

consensus_11218#0      AAATA-TTGAGCCACC-ACCACCTGCTATTTTTGGTTTCGCTGCACCAGCTGGATACTTC 596
consensus_11218#1      AAATAATTGANCCACCCACCACCTGCTATTTTTGGTTTCGCTGCACCAGCTGGATACTTC 81
consensus_11218#2      AAATA-TTGAGCCACC-ACCACCTGCTATGTTTGGTTTCGCTGCACCAGCTGGATACTAT 161
consensus_11218#3      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGAAAAAACAAAAACCCAC 132
                       *** *    *   *   *  *      *          * *** *  * *   *  *   

consensus_11218#0      -GATTTTCCTCCCAAAAGGGGTGGAAGAGGATGGCCTCGGGGCAGGGGTGGATTTGGTGG 655
consensus_11218#1      CGATTTTCCTCCCAAAAGGGGTGGAAGAGGATGNCCTCGGGGCAGGGGTGGATTTGGTGG 141
consensus_11218#2      -GATTTTCCTCCCAAAAGAC-----AGAGNTTNNNTTTTNACCA---GTAAAGTTTGTA- 211
consensus_11218#3      TGAAGGGCCATTCCGTGGCC----AAGGGCAAATTCCCGCCCTATAAATACAATTCCCCC 188
                        **    **   *    *       ** *              *    *  * **     

consensus_11218#0      GCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGAT 715
consensus_11218#1      GCGTGGTCGGGGTCATGTGGGTCGTGGGCGAGGGAGGGGAGACCGTGGAAGTCGGAAGAT 201
consensus_11218#2      ---CAATGGGGTTCTGACANGANGGGGNTTNAAAAGCGCCCCCCCC-----TTGGAAAAT 263
consensus_11218#3      AATAGAGAGGCCTTTTACAA-TCAACGGCCCGACTGTTAAAACCCTGGGGATGGGAAAAT 247
                               **  *             *        *      **       * **** **

consensus_11218#0      TTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAG 775
consensus_11218#1      TTCTGCTGAAGACCTGGATGCTGACTTGGACAAGTACCATGCGGAAGGAATGCAAATGAG 261
consensus_11218#2      CT-TGCCGTACTTTTGA-----GACANANGNNGAGNTTATGCCAAGANAAAAAAANAAAA 317
consensus_11218#3      CCTTGGCTTTCCCCAACTTACCCCTTTTGCCACCTATCCCCT------------------ 289
                          **                                                       

consensus_11218#0      CTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGAC 835
consensus_11218#1      CTAGATGACCCTCACGCTTTGTTGCCTTGCCTTGATTGCATTAGGTAGAGACAGGGGGAC 321
consensus_11218#2      NTANAAAATTTT------------------------------------------------ 329
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      AAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAA 895
consensus_11218#1      AAACTAGTAGGCCTTCCTTGGTCTCCTTGTTAGTATTTTGTAGGGATAGATGCAGACCAA 381
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      CATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAAC 955
consensus_11218#1      CATATGTATACTTTGTTTAGATGGTGTCATAATTTTGAGCAGGGAATGGCTAAGCTTAAC 441
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      CTGGTAGGTAGAAGCTAGCTCATAATATGTAACACGGAGGGAGCACAACTTTGAACTTTT 1015
consensus_11218#1      CTGGTAGGTAGAAGCTAGCTCATAATAAAAAAAAAAAAAAAA------------------ 483
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      ATAGCTAGTGTTGAACTTTTAGCTAGTGTGGGACTGTGGGTTGATGGACACACAAGCAAA 1075
consensus_11218#1      ------------------------------------------------------------
consensus_11218#2      ------------------------------------------------------------
consensus_11218#3      ------------------------------------------------------------
                                                                                   

consensus_11218#0      GCAAGCATGCAGCTTGGCAGCCTGGCAAGAGGAT 1109
consensus_11218#1      ----------------------------------
consensus_11218#2      ----------------------------------
consensus_11218#3      ----------------------------------