|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11233#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1228 fasta sequence
[GTGGTAACTCCGATTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCCGCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAACTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGCGAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCTCTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAACCAAAGAAGCCTGTTCATATGACTGGCAGACGTTCCAAATTTTGCAGGATTGGAACATCCTTTTCAATAAGATTAGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATGTTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTC-AAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAATGCACAAGCATTTGTTGGTGACCGGAAAAAAAAAACTGGGAATAATCAGGGATCCCATATTATCTCGTGGGGCNNAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK103123 [GTGGTAACTCCGATTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCCGCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAACTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGCGAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCTCTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAACCAAAGAAGCCTGTTCATATGACTGGCAGACGTTCCAAATTTTGCAGGATTGGAACATCCTTTTCAATAAGATTAGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATGTTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTC AAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAATGCACAAGCATTTGT ]
[+] EMBL AK070188 [ TTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCCGCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAACTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGCGAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCTCTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAACCAAAGAAGCCTGTTCATATGACTGGCAGACGTTCCAAATTTTGCAGGATTGGAACATCCTTTTCAATAAGATTAGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATGTTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTC AAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAATGCACAAGC ]
[+] EMBL BI799960 [ AGATGAACATCGATGCCCATGTGCCTGAGAATAGAAACCAAAGAAGCCTGTTCATATGACTGGCAGACGTTCCAAATTTTGCAGGATTGGAACATCCTTTTCAATAAGATTAGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATGTTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTCAAAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAATGCACAAGCATTTGTTGGTGACCGGAAAAAAAAAA ]
[+] EMBL CA754458 [ AATAAGATTAGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATGTTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTC AAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAATGCACAAGCATTTGTTGGTGACCGGAACCGATGAGCTGGGAATAATCAGGGATCCCATATTATCTCGTGGGGCNNAAAAAAAAAAAAAAAAAAA]
consensusID : consensus_11233#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 733 fasta sequence
[ATTACCAGTGGTAACTCCGATTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCCGCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAACTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCTGTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATTGCAAATTCCAATCTGACATGCTTGCTGCCATGTTAATGACAATACTGAAATACCTTTTTTTAGTTGCAATTGCATTATGTTTTTCTTTTATTAGTTTCTCAAATGAGTCATGGTGAGTGTGACATTGGATCTATACACTATGATGATGCTTAAATATGTTTCCAT]
[+] EMBL CB653019 [ATTACCAGTGGTAACTCCGATTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCCGCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAACTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCTGTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATTGCAAATTCCAATCTGACATGCTTGCTGCCATGTTAATGACAATACTGAAATACCTTTTTTTAGTTGCAATTGCATTATGTTTTTCTTTTATTAGTTTCTCAAATGAGTCATGGTGAGTGTGACATTGGATCTATACACTATGATGATGCTTAAATATGTTTCCAT]
consensusID : consensus_11233#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[GAAGGAGTAGAAAACCTGAATTAGAAACCGGAGCTGAACTGTACCAATATTTCTCACATTATGGCTGCAGTTGGACTCTGTTCTCTTTCCCACTTTCTGATTGTTGATTAGGTTTATGGAAATTAGGAAGGTAGTTGCTCATTTTTCTTTTGTTTAGTTCCTTGATGGACCTCACTTCATTTGGCATGAACTGCTTTCTGCCCTGCTATATGTTATGTTAAAAGACCCCAGCATTCTCCCACGCCATTCCAACTGATAGTTTCTCTTTCATGATTGAATCTGACAACCATTTTATGCTTCAGTTCTCATTTGCTCCCTAATCCCTGTGGAATTTCGGTTATACTTTTACTTAAGTTTGCTGGATTTACAATTTTCTAATATAAACTGTGAATTTTCTTTTATAGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCTGTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATTGCAAATTCCAATCTGACATGCTTGCTGCCATGTTAATGACAATACTGAAATACCTTTTTTTAGTTGCAATTGCATTATGTTTTTCTTTTATT]
[+] EMBL CF310784 [GAAGGAGTAGAAAACCTGAATTAGAAACCGGAGCTGAACTGTACCAATATTTCTCACATTATGGCTGCAGTTGGACTCTGTTCTCTTTCCCACTTTCTGATTGTTGATTAGGTTTATGGAAATTAGGAAGGTAGTTGCTCATTTTTCTTTTGTTTAGTTCCTTGATGGACCTCACTTCATTTGGCATGAACTGCTTTCTGCCCTGCTATATGTTATGTTAAAAGACCCCAGCATTCTCCCACGCCATTCCAACTGATAGTTTCTCTTTCATGATTGAATCTGACAACCATTTTATGCTTCAGTTCTCATTTGCTCCCTAATCCCTGTGGAATTTCGGTTATACTTTTACTTAAGTTTGCTGGATTTACAATTTTCTAATATAAACTGTGAATTTTCTTTTATAGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCTGTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATTGCAAATTCCAATCTGACATGCTTGCTGCCATGTTAATGACAATACTGAAATACCTTTTTTTAGTTGCAATTGCATTATGTTTTTCTTTTATT]
consensusID : consensus_11233#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 588 fasta sequence
[ACCATTTTATGCTTCAGTTCTCATTTGCTCCCTAATCCCTGTGGAATTTCGGTTATACTTTTACTTAAGTTTGCTGGATTTACAATTTTCTAATATAAACTGTGAATTTTCTTTTATAGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGCGAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCTCTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAAC]
[+] EMBL CA754039 [ACCATTTTATGCTTCAGTTCTCATTTGCTCCCTAATCCCTGTGGAATTTCGGTTATACTTTTACTTAAGTTTGCTGGATTTACAATTTTCTAATATAAACTGTGAATTTTCTTTTATAGGTTATTCTTTGCGGCACATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGCGAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCTCTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAAC]
consensusID : consensus_11233#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 321 fasta sequence
[AGATGTTTTTCCTCAGTCTTTTTCTTTCTTTCTTTGTTGTCACAGCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTC]
[-] EMBL CB653020 [AGATGTTTTTCCTCAGTCTTTTTCTTTCTTTCTTTGTTGTCACAGCTGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATATCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAGGGTGGCGGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAGCTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAAAACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 GTGGTAACTCCGATTTCCTCGCCGGCGCAGCGCCGCAGGTTGGGTTTCTTCCTGCGCAAG 60
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 TTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTCCGCTCGTTCTCTCGCTTCGCTCGCTCGC 120
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 TCGCGTCCCTCCCAAATTCCCCCAAAATAATTGGAACCCCACTCCGCCACCGGTGCGGCC 180
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 GCGGCGGCGCCGAGATCGGAGAGAGAGAGAGATGGTGGTGCGGCGGCTGGGCGGCGCCGG 240
consensus_11233#1 ---------------------ATTACCAGTGGTAACTCCGATTTCCTCGCCGGCGCAGCG 39
consensus_11233#2 ----------------------GAAGGAGTAGAAAACCTGAATTAGAAACCGGAGCTGAA 38
consensus_11233#3 -------------------------------------------------ACCATTTTATG 11
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 CCGCGCGCTGCTGTCCCGCCAGGCGCTCTCGCTGCCCAACCTCCGCCGCCGCGCGTCCAA 300
consensus_11233#1 CCGCAGGTTGGGTTTCTTCCTGCGCAAGTTGGTGTCGCCGCGAGCTGAAGCCGAGCCGTC 99
consensus_11233#2 CTGTAC-CAATATTTCT-------CACATTAT----------GGCTGCAGTTGGACTCTG 80
consensus_11233#3 CTTCAGTTCTCATTTGCTCCCTAATCCCTGTGGAATTTCGGTTATACTTTTACTTAAGTT 71
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 CTCCTGGGCCGCCGTGCGCGACACCTTCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCG 360
consensus_11233#1 CGCTCGTTCTCTCGCTTCGCTCGCTCGCTCGCGTCCCTCCCAAATTCCCCCAAAATAATT 159
consensus_11233#2 TTCTCTTTCCCACTTTCTGATTG-TTGATTAGGTTTATGG-AAATTAGG--AAGGTAGTT 136
consensus_11233#3 TGCTGGATTTACAATTTTCTAATATAAACTGTGAATTTTCT-----TTTATAGGTTATTC 126
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 CGTCGTGTTCACCGTCGGCACATCCATCGCCTCCGTCCTCACCGCATGGGCCGGTTATTC 420
consensus_11233#1 GGAACCCCACTCCGCCACCGGTGCGGCCGCGG-CGGCGCCGAGATCGGAGAGAGAGAGAG 218
consensus_11233#2 GCTCATTTTTCTTTTGTTTAGTTCCTTGATGGACCTCACTTCATTTGGCATGAACTGCTT 196
consensus_11233#3 TTTGCGGCAC-ATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTC 185
consensus_11233#4 --------AG-ATGTTTTTCCTCAGTCTTTTTC-----TTTCTTTCTTTGTTGTCACAGC 46
consensus_11233#0 TTTGCGGCAC-ATGCAACAATCAAGGATTGATAAGAGACTTAACTCAATTGAACAATCTC 479
consensus_11233#1 ATGGTGGTGCGGCG-GCTGGGCGGCGCCGGCCGCGCGCTGCTGTCCCGCCAGGCGCTCTC 277
consensus_11233#2 TCTGCCCTGCTATATGTTATGTTAAAAGACCCCAGCATT-CTCCCACGCCATTCCAACTG 255
consensus_11233#3 TGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATA 245
consensus_11233#4 TGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATA 106
consensus_11233#0 TGAAGGATACTCACAAAGTCGAACATGAAGAGATTAAAAAGATTGTCACTTCCAGTAATA 539
consensus_11233#1 GCTGCCCAACCTCCGCCGCCGCGCGTC-CAAC--TCCTGGG-CCGCCGTGCGCGACACCT 333
consensus_11233#2 ATAGTTTCTCTTTCATGATTGAATCTGACAACCATTTTATG-CTTCAGTTCTCATTTGCT 314
* * * * * * * *
consensus_11233#3 TCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAG 305
consensus_11233#4 TCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAG 166
consensus_11233#0 TCAGCACTCCAGCCTGTGTAGCCACTGCATTGACAACTTCAGTTGTCGGGTATGCGCTAG 599
consensus_11233#1 TCTTCTCCACCAAGGAAGTGTTCGAGAGCCACCGCGTCGTGTTCACCG--TCGGCACATC 391
consensus_11233#2 CCCTAATCCCTGTGGAA-TTTCGGTTATACTTTTACTTAAGTTTGCTGGATTTACAATTT 373
* * * * * * *
consensus_11233#3 GGTGGC----GGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAG 361
consensus_11233#4 GGTGGC----GGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAG 222
consensus_11233#0 GGTGGC----GGGGTGGAGCCTGGTACGCTCGGAGAGGCTTCCGAAGAGAGCAACAGAAG 655
consensus_11233#1 CATCGCCTCCGTCCTCA--CCGCATGGGCCGGTTATTCTTTGCGGCACATGCAACAATCA 449
consensus_11233#2 TCTAATATAAACTGTGAATTTTCTTTTATAGGTTATTCTTTGCGGCACATGCAACAATCA 433
* * * * ** ** ******
consensus_11233#3 CTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAA 421
consensus_11233#4 CTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAA 282
consensus_11233#0 CTGATGGGCCAAATCAATTCACACCACAGATGGCACTGGCGGCCTTTCAGTAAACTCAAA 715
consensus_11233#1 AGGATTGAT-AAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCT 508
consensus_11233#2 AGGATTGAT-AAGAGACTTAACTCAATTGAACAATCTGTAAGTCATTTATTGGATAGTCT 492
*** * ** * ** ** * * ** *** * * ** * * *
consensus_11233#3 AACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGC 481
consensus_11233#4 AACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTC--------------------- 321
consensus_11233#0 AACAGACTCAGAAGGAACCGACCAGCGGCCAAGACTGTCGAGGCCCCTCGGTTGACAGGC 775
consensus_11233#1 GTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATT 568
consensus_11233#2 GTTAGCATGCTTACTTATTTGTGAATGTATCACTGGGTTTCTTTCTCTGTGTTCGGTATT 552
** * * * * * * **
consensus_11233#3 GAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCT 541
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 GAAAGCACCATCTGAAAATGTTAACAGTAACTCTCAGGCAGCAGGATGTGCATGATTCCT 835
consensus_11233#1 GCAAATTCCAATCTGACATGCTTGCTGCCATGTTAA--TGACAATACTGAAATACCTTTT 626
consensus_11233#2 GCAAATTCCAATCTGACATGCTTGCTGCCATGTTAA--TGACAATACTGAAATACCTTTT 610
consensus_11233#3 CTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAAC------------- 588
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 CTGAAATACAGATGAACATCGATGCCCATGTGCCTGAGAATAGAAACCAAAGAAGCCTGT 895
consensus_11233#1 TTTAGTTGCAATTGCATTATGTTTTTCTTTTATTAGTTTCTCAAATGAGTCATGGTGAGT 686
consensus_11233#2 TTTAGTTGCAATTGCATTATGTTTTTCTTTTATT-------------------------- 644
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 TCATATGACTGGCAGACGTTCCAAATTTTGCAGGATTGGAACATCCTTTTCAATAAGATT 955
consensus_11233#1 GTGACATTGGATCTATACACTATGATGATGCTTAAATATGTTTCCAT------------- 733
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 AGGATCGGAACTAGGGAGATTATCTTCCTAATTCTCATAGGAAAATGCCTTGCGCTGATG 1015
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 TTACCGTTTACTACTAGCCAGGCTGATATTTGTCATTTTTGTCATGCTGTTTTCCCTTTC 1075
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 AAAATGTGCCTGCCTCGTCGAGGCATTGCACCTGTAATTCGTCGATGGACACATGAGAAT 1135
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ------------------------------------------------------------
consensus_11233#4 ------------------------------------------------------------
consensus_11233#0 GCACAAGCATTTGTTGGTGACCGGAAAAAAAAAACTGGGAATAATCAGGGATCCCATATT 1195
consensus_11233#1 ------------------------------------------------------------
consensus_11233#2 ------------------------------------------------------------
consensus_11233#3 ---------------------------------
consensus_11233#4 ---------------------------------
consensus_11233#0 ATCTCGTGGGGCNNAAAAAAAAAAAAAAAAAAA 1228
consensus_11233#1 ---------------------------------
consensus_11233#2 ---------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||