cluster # 11250

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Oryza sativa
cluster # 11250 cluster # 11250 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11250#0 length = 2495 sequences # 7

consensus_11250#1 length = 327 sequences # 1

consensusID : consensus_11250#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2495
fasta sequence

                              [CAAGCGAAGTCCTCTCTCTTCACACTTCACACACGCTCTCGGTCTCGGTCTCTCGCTTTTTACCACACTACTCTGCTGCGACCGCGAAGGGAGGGGTGTGTGTGGGTTGGATCAACTACCCCAGCTACTGCCGTGCCGAGGGAAGCGGGAGCGCCGCCCTAGCGACCGCAACTGCAGGCGCGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGCCGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTTCCCTGATTTGGAGATTCATCAAATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGTGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTC--CAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGGGAATTTTGATTGTTGGAATTGTGCATTTTGTGGTGTGATTTCATTATTTCGGCCGA]

[+] EMBL AK103598             [CAAGCGAAGTCCTCTCTCTTCACACTTCACACACGCTCTCGGTCTCGGTCTCTCGCTTTTTACCACACTACTCTGCTGCGACCGCGAAGGGAGGGGTGTGTGTGGGTTGGATCAACTACCCCAGCTACTGCCGTGCCGAGGGAAGCGGGAGCGCCGCCCTAGCGACCGCAACTGCAGGCGCGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGCCGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTTCCCTGATTTGGAGATTCATCAAATGGGTCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGTGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCACATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTGCAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTC  CAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGGGAATTTTGATTGTT                                          ]
[+] EMBL AK099672             [                                                                                                    TGTGGGTTGGATCAACTACCCCAGCTACTGCCGTGCCGAGGGAAGCGGGAGCGCCGCCCTAGCGACCGCAACTGCAGGCGCGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGCCGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTTCCCTGATTTGGAGATTCATCAAATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTAAGTGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTGCGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTCCACAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGGGAATTTTGATTGTTGGAATTGTGCATTTTGTGGTGTGATTTCATTATTTCGGCCGA]
[+] EMBL AK073851             [                                                                                                                                                          CGCCCTAGCGACCGCAACTGCAGGCGCGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGCCGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTTCCCTGATTTGGAGATTCATCAAATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACACATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGTGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGT CCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTTGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTC  CAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTT                                                                 ]
[+] EMBL C28851               [                                                                                                                                                                                                                                                                                   AAACGAAGATGCTGCTCGTCTAGTTCCCTGATTTGGAGATTCATCAAATGGNTCATCTCAGTATTAGAAATCCTTTGTCTCTTCTGCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTCTGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTGGAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGNGATCAGTCACACATATTTGANTTAAGGGTACCAGGTGCTGGTCTCATTGGGGCAATTNCTCCAAACACTCTTGGAAAGCTTGACTCTNTCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CF324161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AATCGTTTAGCTGGAAGCCTTCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTTTTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGTGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK103917             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTC  CAGATCGACGCCCATCGATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCACCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGGGAATTTTGATTGTT                                          ]
[+] EMBL CA755870             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTC  CAGATCGACGCCCATCGATGGAGGATG                                                                                                                                                                                                                                                                                                                                                         ]




>consensus_11250#0
CAAGCGAAGTCCTCTCTCTTCACACTTCACACACGCTCTCGGTCTCGGTCTCTCGCTTTT
TACCACACTACTCTGCTGCGACCGCGAAGGGAGGGGTGTGTGTGGGTTGGATCAACTACC
CCAGCTACTGCCGTGCCGAGGGAAGCGGGAGCGCCGCCCTAGCGACCGCAACTGCAGGCG
CGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGC
CGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTT
CCCTGATTTGGAGATTCATCAAATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCT
GCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTC
TGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCAACTG
GAGTCAAAGCACATCATTGTGTTCTTGGCATGGCGTAAAATGCTCAGGAGATCAGTCACA
CATATTTGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCT
TGGAAAGCTTGACTCTCTCCAAGTTCTGAGCTTACGGTCTAATCGTTTAGCTGGAAGCCT
TCCATCTGATGTGACTACGCTTCCTTCCTTACGATCCATATACCTTCAGCACAATAACTT
TTCAGGAGATTTGCCTTCCTTTTTGAATCCTAACCTCAGTGTAGTGGACCTCTCCTACAA
TTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCTTTCTCAGTTATCAGTCCTGAA
TTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCTCAAGCTTCCAAGTCTGAGACT
ATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCCTCAGTCGCTTCAAACATTTCC
AAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCCACCTCTAGCTAAATGCTTGCT
TCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATCAGCACCAACTCCAATGTCAGC
GCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGCAGTTGCTGTTGGGGGCTTCGC
AGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAATTCAAAGAGGAAAGGCAAGAA
AGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGTCAGAAGTGAGAAGCCAAAACA
GGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAAGTTGGTTTTCTTGGAGGGTTG
CTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTCTGCAGAAGTCCTTGGCAAGGG
AAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGGTACCGTTGTTGTTGTCAAGAG
ACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCAACAGATGGAACTAATTGGTAG
GTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTACTACTATTCTAAGGACGAGAA
GCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTCAACCAAGTTACATGGTATCAG
GGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAGAGTGAAGATAATCCTTGGAAC
AGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGCCAAGCTCACCCATGGCAATAT
TAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTCTTATGTTTCAGACTATGGTCT
AACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGTTGTGGTCGGTTATCGCGCTCC
TGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGACGTCTACAGCTTCGGCGTCCT
CCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTCGCAGGGCAATGACGATGTCGT
CGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGAGTGGACAGCCGAGGTGTTCGA
CGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCTTGTTCAGATGCTCCAGATAGC
AATGGCTTGCACATCAAGGTCTCCAGATCGACGCCCATCGATGGAGGATGTGATCAGGAT
GATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGCTTCCTCTGATGAAAAGATGAA
GGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGTGTTCATATGCCTCACCAAGCT
GCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGATTGAGTTCATGCTAAACATGGT
CGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTGATTGGAACTTATGAGTCTTGA
ATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGGGAATTTTGATTGTTGGAATTG
TGCATTTTGTGGTGTGATTTCATTATTTCGGCCGA

consensusID : consensus_11250#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 327
fasta sequence

                              [GCCGCTGTGGCAACAGGCTCATACTGGAGTCAGAAGCACATCATTGGTGTATCTTGCGCATGGCGTAAAATGCTCATGGAGGATCAGTCACACATATTGTGAATTAAGGGTACCATGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTACTCCAAGTTCCTGAGCTTACGGTCTAATCGTGTAGCTTGGAAGCCTCCCATCTGATGTGACTACGTCTTCCCTTCCTTGACGATCCATATACCTTGCAAACACAATAAACTTTTCACGGAGATTTAGCCTATCCTTTTTAGAATCCGGAGCCTACAG]

[+] EMBL AU225335             [GCCGCTGTGGCAACAGGCTCATACTGGAGTCAGAAGCACATCATTGGTGTATCTTGCGCATGGCGTAAAATGCTCATGGAGGATCAGTCACACATATTGTGAATTAAGGGTACCATGTGCTGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTACTCCAAGTTCCTGAGCTTACGGTCTAATCGTGTAGCTTGGAAGCCTCCCATCTGATGTGACTACGTCTTCCCTTCCTTGACGATCCATATACCTTGCAAACACAATAAACTTTTCACGGAGATTTAGCCTATCCTTTTTAGAATCCGGAGCCTACAG]




>consensus_11250#1
GCCGCTGTGGCAACAGGCTCATACTGGAGTCAGAAGCACATCATTGGTGTATCTTGCGCA
TGGCGTAAAATGCTCATGGAGGATCAGTCACACATATTGTGAATTAAGGGTACCATGTGC
TGGTCTCATTGGAGCAATTCCTCCAAACACTCTTGGAAAGCTTGACTCTACTCCAAGTTC
CTGAGCTTACGGTCTAATCGTGTAGCTTGGAAGCCTCCCATCTGATGTGACTACGTCTTC
CCTTCCTTGACGATCCATATACCTTGCAAACACAATAAACTTTTCACGGAGATTTAGCCT
ATCCTTTTTAGAATCCGGAGCCTACAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11250#0      CAAGCGAAGTCCTCTCTCTTCACACTTCACACACGCTCTCGGTCTCGGTCTCTCGCTTTT 60
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TACCACACTACTCTGCTGCGACCGCGAAGGGAGGGGTGTGTGTGGGTTGGATCAACTACC 120
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CCAGCTACTGCCGTGCCGAGGGAAGCGGGAGCGCCGCCCTAGCGACCGCAACTGCAGGCG 180
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CGCATTTCACGGGATTCCGTGGGCTGTGCTGTGCTGTACAGACCGGCGACGAGCCGCCGC 240
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CGCCGTGGAGGATCGGCTACTTATCTGACATAAACAAACGAAGATGCTGCTCGTCTAGTT 300
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CCCTGATTTGGAGATTCATCAAATGGATCATCTCAGTATTAGAAATCCTTTGTCTCTTCT 360
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GCTCTCACTGCAGTTGTCACTTTTGTTGTTCAATCCCTTGTCTGTAGCAGACTTAACCTC 420
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TGAAAAGCAAGCCCTTCTAGACTTTGCCTCTGCAGTGTATCGTGGCAACAGGCTCA-ACT 479
consensus_11250#1      -----------------------------------GCCGCTGTGGCAACAGGCTCATACT 25
                                                                *************** ***

consensus_11250#0      GGAGTCA-AAGCACATCATTG-TGT-TCTTG-GCATGGCGTAAAATGCTCA--GGAGATC 533
consensus_11250#1      GGAGTCAGAAGCACATCATTGGTGTATCTTGCGCATGGCGTAAAATGCTCATGGAGGATC 85
                       ******* ************* *** ***** *******************  *  ****

consensus_11250#0      AGTCACACATATT-TGAATTAAGGGTACCAGGTGCTGGTCTCATTGGAGCAATTCCTCCA 592
consensus_11250#1      AGTCACACATATTGTGAATTAAGGGTACCATGTGCTGGTCTCATTGGAGCAATTCCTCCA 145
                       ************* **************** *****************************

consensus_11250#0      AACACTCTTGGAAAGCTTGACTCT-CTCCAAGTTC-TGAGCTTACGGTCTAATCGTTTAG 650
consensus_11250#1      AACACTCTTGGAAAGCTTGACTCTACTCCAAGTTCCTGAGCTTACGGTCTAATCGTGTAG 205
                       ************************ ********** ******************** ***

consensus_11250#0      CT-GGAAGCCTTCCATCTGATGTGACTACGCTT--CCTTCCTT-ACGATCCATATACCTT 706
consensus_11250#1      CTTGGAAGCCTCCCATCTGATGTGACTACGTCTTCCCTTCCTTGACGATCCATATACCTT 265
                       ** ******** ******************  *  ******** ****************

consensus_11250#0      C--AGCACAATAA-CTTTTCA-GGAGATTT-GCCT-TCCTTTTT-GAATCCTAACCTCAG 759
consensus_11250#1      GCAAACACAATAAACTTTTCACGGAGATTTAGCCTATCCTTTTTAGAATCCGGAGCCTAC 325
                          * ******** ******* ******** **** ******** ******  * *  * 

consensus_11250#0      TGTAGTGGACCTCTCCTACAATTCCTTTACCGGTGAAATTCCTATAAGCTTACAAAACCT 819
consensus_11250#1      AG---------------------------------------------------------- 327
                        *                                                          

consensus_11250#0      TTCTCAGTTATCAGTCCTGAATTTACAAGAAAATTCTCTCTCTGGATCCATCCCTGATCT 879
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CAAGCTTCCAAGTCTGAGACTATTGAATCTGAGCAACAATGATTTGAAAGGCCAAATTCC 939
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TCAGTCGCTTCAAACATTTCCAAATGGCTCATTCTTGGGGAATCCTGGATTATGTGGGCC 999
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      ACCTCTAGCTAAATGCTTGCTTCCTGATTCACCGACGCCTTCACCAGCATCCCCTTCATC 1059
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      AGCACCAACTCCAATGTCAGCGCATCATGAGAAAAAGTTTGGCGCCGGATTCATAATTGC 1119
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      AGTTGCTGTTGGGGGCTTCGCAGTACTGATGTTTGTTGTGGTTGTGTTGGTTGTGTGTAA 1179
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TTCAAAGAGGAAAGGCAAGAAAGAGAGTGGTGTGGACTACAAGGGTAAGGGCACTGGTGT 1239
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CAGAAGTGAGAAGCCAAAACAGGAGTTCAGTAGTGGCGTTCAGATCGCCGAGAAAAACAA 1299
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GTTGGTTTTCTTGGAGGGTTGCTCCTATACCTTCGATTTGGAGGATCTACTGAGAGCTTC 1359
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TGCAGAAGTCCTTGGCAAGGGAAGTTATGGAACTGCTTACAAAGCTATACTTGAGGATGG 1419
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TACCGTTGTTGTTGTCAAGAGACTAAAAGATGTCGTGGCAGGAAAAAAAGAGTTTGAGCA 1479
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      ACAGATGGAACTAATTGGTAGGTTAGGTAAACATGCAAACTTAGTCCCACTTCGTGCTTA 1539
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CTACTATTCTAAGGACGAGAAGCTCATCGTCTACGATTATCTCACCAATGGCAGTTTCTC 1599
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      AACCAAGTTACATGGTATCAGGGGTGTTACTGAAAAGACACCATTAGACTGGAGCACCAG 1659
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      AGTGAAGATAATCCTTGGAACAGCATACGGCATTGCACACGTTCATGCAGAAGGTGGCGC 1719
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CAAGCTCACCCATGGCAATATTAAGTCTACAAATATCCTCCTCGATCAAGATTACAGTTC 1779
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TTATGTTTCAGACTATGGTCTAACTGCCCTGATGAGTGTTCCAGCCAATGCATCTCGCGT 1839
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TGTGGTCGGTTATCGCGCTCCTGAGACCATCGAGAACCGCAAGATCACCCAGAAATCCGA 1899
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      CGTCTACAGCTTCGGCGTCCTCCTCATGGAGATGCTTACCGGTAAAGCTCCACTCCAGTC 1959
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GCAGGGCAATGACGATGTCGTCGACCTACCAAGATGGGTGCACTCGGTGGTCAGAGAGGA 2019
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GTGGACAGCCGAGGTGTTCGACGTCGAGCTGATCAAGCAGCAAAACATCGAGGAGGAGCT 2079
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TGTTCAGATGCTCCAGATAGCAATGGCTTGCACATCAAGGTCTCCAGATCGACGCCCATC 2139
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GATGGAGGATGTGATCAGGATGATCGAGGGACTGCGCCATTCTGCTTCAGAGAGCCGAGC 2199
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TTCCTCTGATGAAAAGATGAAGGACTCCAATCCACCATCGGTTTAGTTATGTGCTCCTGT 2259
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GTTCATATGCCTCACCAAGCTGCGAGTTGCAGATCATTTGATTCTTAGCTAATTTGTGAT 2319
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      TGAGTTCATGCTAAACATGGTCGACATTAGATGCAGCCTCAGAAAGCTGAGCATATTCTG 2379
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      ATTGGAACTTATGAGTCTTGAATTCTTGATTCTTGACAAGTGTAGGATTTTTTTCTCTGG 2439
consensus_11250#1      ------------------------------------------------------------
                                                                                   

consensus_11250#0      GAATTTTGATTGTTGGAATTGTGCATTTTGTGGTGTGATTTCATTATTTCGGCCGA 2495
consensus_11250#1      --------------------------------------------------------