cluster # 11253

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Oryza sativa
cluster # 11253 cluster # 11253 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11253#0 length = 1890 sequences # 6

consensus_11253#1 length = 716 sequences # 1
consensus_11253#2 length = 667 sequences # 1

consensusID : consensus_11253#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1890
fasta sequence

                              [AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGCTCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACCGGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTTTACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATGGCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACGCTT--GAATGGAAATTT-AATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCATACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTCACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAGGAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGGAGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGATTTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCGACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAATTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAACCTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTGCTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGCAAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTATCCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAATGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAGT]

[+] EMBL AK105822             [AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGCTCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACCGGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTTTACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATGGCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACGCTT  GAATGGAAATTT AATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCATACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTCACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAGGAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGGAGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGATTTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCGACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAATTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAACCTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTGCTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGCAAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTATCCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAATGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAG ]
[+] EMBL AK073163             [AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGCTCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACCGGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTTTACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATGGCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACGCTT  GAATGGAAATTT AATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCATACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTCACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAGGAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGGAGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGATTTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCGACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAATTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAACCTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTGCTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGCAAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTATCCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAATGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAG ]
[+] EMBL CB667695             [AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGCTCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACCGGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTTTACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATGGCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACGCTT  GAATGGAAATTT AATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCATACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTCACACCATATCGCAATACAGATTTGCGTGATCTNCAACTGTTCATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL OS0267A              [                                                                                                                                                                                  TCTCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATCGGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCA NTTCCGAAGTGGCTCTTTTACCTCCGCAAGGCGGCGCA CGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATNGCCAGGAGGGAGCAGAACCGTTCAAGGNACAACCACAGANAGGATTGCATATACTNGACGCTTTNTAATNGAAATTTNAATTCAACAGATGTAGTCCTGACTNANCACAACATAGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB667696             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAATGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTTTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAGT]
[-] EMBL CB684226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AACATAATCAACAAAGCAGGGTGGCGCCAAATTTAACTCCTGAAGCTTTGAAAAGGAAGTTTTGCATGAAAGTTTACCCCCTGGACCCCGAGAAAAATTTGGGGTTATTTTTAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATTTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCCCTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATTTTAAGCCAGTTTAGCAAATGAGCTTTGCAGGACAGGAGTTTTTTTTTTTTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTTTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTTTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTTTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGGGTAACCTTGTTGTTGCTATTTTTCGGAAT                                          ]




>consensus_11253#0
AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGC
TCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACC
GGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTC
TCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATC
GGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTT
TACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATG
GCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACG
CTTGAATGGAAATTTAATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCAT
ACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTC
ACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAG
GAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGG
AGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGAT
TTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCG
ACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAA
TTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAAC
CTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTG
CTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGC
AAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTAT
CCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAA
TGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTA
TCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCT
GATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCA
ACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAA
AATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCT
TATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATG
ATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAG
GAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAG
CAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTA
GCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCG
CCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGATAG
CTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATGAA
CAATGTTAATGGATGTGAAAACATGTCAGT

consensusID : consensus_11253#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 716
fasta sequence

                              [ACTTTATAGAATGGACATGGTGGAAAGTGGGGATGCTGGGGAGATCTCAGAGAGGCTGGGAATAAAATGTTATCCCCACGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAGGCAAAGGTGCCT]

[+] EMBL CB684225             [ACTTTATAGAATGGACATGGTGGAAAGTGGGGATGCTGGGGAGATCTCAGAGAGGCTGGGAATAAAATGTTATCCCCACGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCCAAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAGGCAAAGGTGCCT]




>consensus_11253#1
ACTTTATAGAATGGACATGGTGGAAAGTGGGGATGCTGGGGAGATCTCAGAGAGGCTGGG
AATAAAATGTTATCCCCACGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTAC
AACCGTATCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCT
AGCATCTGATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGCC
AAATTCAACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACAC
CGAGAAAAATCTGGGGTTATTTTCAGAGGTTCCCAACTTGGGCTTTGAGCAAGAAATCGG
AAATGCTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCT
TGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGA
TTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCC
AGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCA
TCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTC
TTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAGGCAAAGGTGCCT

consensusID : consensus_11253#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 667
fasta sequence

                              [GGCTTCTTATGGGGTCGGTGGGTCCTAGGTGAAACGTATCGCCGAAACGGGCTGGGAAGCAAATTTAGGTCCTGAAGTTTTAAAAAGGAATTCGTGCGGGAAATGTTACGCGCTGGACCGCGAGAAAAATCTGGGGTTATGTTCAGAGGTTTCCAAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGAACATAAATCATGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGAATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATTTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTTTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTTGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAGTTTGTTGCTGAAAAAAAAAAAGAAAAAAAA]

[-] EMBL CA758959             [GGCTTCTTATGGGGTCGGTGGGTCCTAGGTGAAACGTATCGCCGAAACGGGCTGGGAAGCAAATTTAGGTCCTGAAGTTTTAAAAAGGAATTCGTGCGGGAAATGTTACGCGCTGGACCGCGAGAAAAATCTGGGGTTATGTTCAGAGGTTTCCAAACTTGGGCTTTGAGCAAGAAATCGGAAATGCTTATTCAGATTTGTTTGGGAACATAAATCATGATGATTTCCTCAACTTTGATCTTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGAATGATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATTTTAAGCCAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTTTTCAAGCCAAAGGTGCCTTTTTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTTGGAATGGAATCAATGAACAATGTTAATGGATGTGAAAACATGTCAGTTTGTTGCTGAAAAAAAAAAAGAAAAAAAA]




>consensus_11253#2
GGCTTCTTATGGGGTCGGTGGGTCCTAGGTGAAACGTATCGCCGAAACGGGCTGGGAAGC
AAATTTAGGTCCTGAAGTTTTAAAAAGGAATTCGTGCGGGAAATGTTACGCGCTGGACCG
CGAGAAAAATCTGGGGTTATGTTCAGAGGTTTCCAAACTTGGGCTTTGAGCAAGAAATCG
GAAATGCTTATTCAGATTTGTTTGGGAACATAAATCATGATGATTTCCTCAACTTTGATC
TTGAAATGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGAATG
ATTTGGAGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATTTTAAGC
CAGTCTAGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTC
ATCTGTTAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTT
CTTTTGCGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTTTTCAAGCCAAAGGTGCCTTT
TTTGATAGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTTGGAATGGAA
TCAATGAACAATGTTAATGGATGTGAAAACATGTCAGTTTGTTGCTGAAAAAAAAAAAGA
AAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11253#0      AAGGGGAGCCCGTGCGAGGAGTGCGGCGAGCAGCCATGGAAGTACCGGTGCCCGGGCTGC 60
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TCCCGCCTCACCTGCAGCCTCCCCTGCGTCCAATCCCACAAGCGCCGCACCGCCTGCACC 120
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      GGCAAGCGCCCCCGCACCGACCCCGTCCCGCTCGCCAACTTCGACGACCACCAGCTCCTC 180
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TCCGATTACAGCTTTCTGGAGGAGACGAAGCAGGTGGCGGAGTCCGCGCATCGCCTCATC 240
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      GGCGCCTTCGGCCGCAACTACGGTGGATTCGGCGGTGCGCAGCTTCCGAAGTGGCTCTTT 300
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TACCTCCGCAAGGCGGCGCAGCGGCGTGGTATCTGGCTCCAGTTCCTTCCCAGGGGCATG 360
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      GCCAGGAGGGAGCAGAACCGTTCAAGGCACAACCACAGAAAGGATTGCATATACTGGACG 420
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      CTTGAATGGAAATTTAATTCAACAGATGTTGTCCTGACTGACCACAACATAGATGAGCAT 480
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      ACCAGCTTGCTATCATCATTGGAAAAACATCTGAGTCCTGGACCTTGGAAAAATCAGCTC 540
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      ACACCATATCGCAATACAGATTTGCGTGATCTCAAACTGTTCATTCAAAAGTCTGCCAAG 600
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      GAATCAACTTCACCATATCGCCAACTCAACATAGAAGAACCATTGGGTCCACAACTGAGG 660
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      AGCATTAAAATTGTCGAGTACCCAACTATTAATGTCTTTCTTCCATCAGACAGTTGTGAT 720
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TTCGAAGTAGAAAAGTTTGTCAACAAGCTTCCTGCAAGTGAGAAGCCCCCTGGCAGCTCG 780
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      ACCGATAGCCCAGATCTAGAAGGCACTGAGTTTCATGAGGAAGAAATAGAAGAAGGAGAA 840
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TTGGCACCAGAAACACAAGTTATAGACCTCAAGGAATGTGGAGCTTCACATGCCTCTAAC 900
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      CTAGCTTCAGCGAAGGATACAAGTGGATCTAAGGTAGACACCAAGAGAGATTCTTCTGTG 960
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      CTGTCATATATACGCAGTCTTGGATTAGATGGTCAACAAAAAGCACTAACTGAACGAAGC 1020
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      AAGATGGCACCAAATACAACATCTGGGGCTTCCAAGACTAAAAATTGCATGAAAGTCTAT 1080
consensus_11253#1      -----------------------------------------------------ACTTTAT 7
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      CCGATGGACATGGAGGAAAGTGGGGATGCTGGGGTGATCTCGGAGAGGCAGGGCATAGAA 1140
consensus_11253#1      AGAATGGACATGGTGGAAAGTGGGGATGCTGGGGAGATCTCAGAGAGGCTGGGAATAAAA 67
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TGTAAGAACCAGGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTA 1200
consensus_11253#1      TGTTATCCCCACGCAGCTTCGCATCCTGGTAATCTTACACCTGTGGAAGGTACAACCGTA 127
consensus_11253#2      ------------------------------------------------------------
                                                                                   

consensus_11253#0      TCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCT 1260
consensus_11253#1      TCTAAGATAGATAGCAACACAGATTCTTTAGTGCCGTCTTCCATCAGTATTCTAGCATCT 187
consensus_11253#2      -----------------------------------------------------GGCTTCT 7
                                                                             ** ***

consensus_11253#0      GATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGC-CAAATTC 1319
consensus_11253#1      GATGGCTTCAGTTGTCCTCAGGTTGAACATAATCAACAAAGCAGGCTGACGC-CAAATTC 246
consensus_11253#2      TATGGGGTCGGTGGGTCCTAGGTGAAACGTA-TCGCCGAAACGGGCTGGGAAGCAAATTT 66
                        ****  ** ** *  *  ****  *** ** **  * ** * *****     ****** 

consensus_11253#0      AACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAA 1379
consensus_11253#1      AACTCCTGAAGCTCTGAAAAGGAAGTCTTGCATGAAAGTTTACCCACTGGACACCGAGAA 306
consensus_11253#2      AGGTCCTGAAGTTTTAAAAAGGAATTCGTGCGGGAAATGTTACGCGCTGGACCGCGAGAA 126
                       *  ******** * * ******** ** ***  ****  **** * ******  ******

consensus_11253#0      AAATCTGGGGTTATTTTCAGAGGTTCCCAA-CTTGGGCTTTGAGCAAGAAATCGGAAATG 1438
consensus_11253#1      AAATCTGGGGTTATTTTCAGAGGTTCCCAA-CTTGGGCTTTGAGCAAGAAATCGGAAATG 365
consensus_11253#2      AAATCTGGGGTTATGTTCAGAGGTTTCCAAACTTGGGCTTTGAGCAAGAAATCGGAAATG 186
                       ************** ********** **** *****************************

consensus_11253#0      CTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAA 1498
consensus_11253#1      CTTATTCAGATTTGTTTGGGGACATAAATCCTGATGATTTCCTCAACTTTGATCTTGAAA 425
consensus_11253#2      CTTATTCAGATTTGTTTGGGAACATAAATCATGATGATTTCCTCAACTTTGATCTTGAAA 246
                       ******************** ********* *****************************

consensus_11253#0      TGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGG 1558
consensus_11253#1      TGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGGATGATTTGG 485
consensus_11253#2      TGATGGATGAAGATGAATTGGCAGGGATAACGTCGCCACTTAAGCTGTGGAATGATTTGG 306
                       ************************************************** *********

consensus_11253#0      AGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCT 1618
consensus_11253#1      AGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATCTTAAGCCAGTCT 545
consensus_11253#2      AGGAAGGGGAGATTCCAACCGCTTGATCATTGTGACTGTGGGATGATTTTAAGCCAGTCT 366
                       *********************************************** ************

consensus_11253#0      AGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGT 1678
consensus_11253#1      AGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGT 605
consensus_11253#2      AGCAAATGAGCTTTGCAGGACAGGAGTTCTTTTTCTCTAGAGGCAATCAGATTCATCTGT 426
                       ************************************************************

consensus_11253#0      TAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTG 1738
consensus_11253#1      TAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTG 665
consensus_11253#2      TAGCCTTTTTCTTGATGTATTATTCGTCAGAAGTTTTGTCCAAGTTTCTTTGTTCTTTTG 486
                       ************************************************************

consensus_11253#0      CGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAAGCCAAAGGTGCCTTTTTTGAT 1798
consensus_11253#1      CGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTCTTCAGGC-AAAGGTGCCT-------- 716
consensus_11253#2      CGCCTTGCACTGCAGCATAGGGTGCCTGGTGTTTTTCAAGCCAAAGGTGCCTTTTTTGAT 546
                       ********************************* **** ** **********        

consensus_11253#0      AGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTCGGAATGGAATCAATG 1858
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      AGCTGCAGTAATTTTGGGGGTGTAACCTTGTTGTTGCTATCTTTTGGAATGGAATCAATG 606
                                                                                   

consensus_11253#0      AACAATGTTAATGGATGTGAAAACATGTCAGT---------------------------- 1890
consensus_11253#1      ------------------------------------------------------------
consensus_11253#2      AACAATGTTAATGGATGTGAAAACATGTCAGTTTGTTGCTGAAAAAAAAAAAGAAAAAAA 666
                                                                                   

consensus_11253#0      -
consensus_11253#1      -
consensus_11253#2      A 667