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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11333#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1733 fasta sequence
[TCTCTCCGCCCCGCCTCCCCTTCCGTCTCTCCGCGCTCCAGCTCCACGCCAATTAAACCCTACTCCTCTTGCGTTGCGTTATCTGCGGTTCCGTCTCCCACTACTCGCGCACACGTAGAAACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTG-CCCTACG-GCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCG-TACGA-TCAACTCGCGGAGCTGGAA-TGGC-TATCCAACTA-TATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCT-CCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAG-AAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGAGCTTACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGCACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAGAGATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGAACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTTTTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAGCTCGTCGAATTTTTCGTGTCAATTTTGTTTATGATGCTCTTTAAGTTTACCACCTTTTCTAGCCGGGAGTTGATTTCTCTAGCTTCTACTTATCTTCCTCTCTATCTTGCCATTTAATTTGTAACGCATTTCAAGGTACTTAAAT]
[+] EMBL AK121896 [TCTCTCCGCCCCGCCTCCCCTTCCGTCTCTCCGCGCTCCAGCTCCACGCCAATTAAACCCTACTCCTCTTGCGTTGCGTTATCTGCGGTTCCGTCTCCCACTACTCGCGCACACGTAGAAACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTG CCCTACG GCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCG TACGA TCAACTCGCGGAGCTGGAA TGGCNTATCC ACTA TATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGNTCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCCGCCGT CCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAGAAAGACGCGCCGGCGCCCACGGCGCAGGCGCAGCTCTCGGGCGTGCCGGTGCACTCGGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGAGCTTACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCACCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGAAGGAGATGCACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAGTGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGAGCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAGAGATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGAACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTTTTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAGCTCGTCGAATTTTTCGTGTCAATTTTGTTTATGATGCTCTTTAAGTTTACCACCTTTTCTAGCCGGGAGTTGATTTCTCTAGCTTCTACTTATCTTCCTCTCTATCTTGCCATTTAATTTGTAACGCATTTCAAGGTACTTAAAT]
[+] EMBL AU172771 [ CTCCGCGCTCCAGCTCCACGCCAATTAAACCCTACTCCTCTTGCGTTGCGTTATCTGCGGTTCCGTCTCCCACTACTCGCGCACACGTAGAAACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTG CCCTACG GCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTT ]
[-] EMBL CB964721 [ TCGTGTTGCCCCTTCGACCGAGGAGGATG AACTACAAGGGAGGGTGAGTCCACCGCCGGTAAGGAGGAGTCTGCCGCCTTTGGGAACGCGTCGCCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCG TACGA TCAACTCGCGGAGCTGGAA TGGC TATCCAACTA TATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCTGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCT CCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTAAGAAG AAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGC GCTCGGCGCCA C GCCGCAGCtattccc ]
[-] EMBL CB964828 [ GCGAGCTGCGCGAGCCGCTACGACTCAACTCGCGGAGCCGGAACTGGC TACCCAACTACTACGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAGAAGCCGCAGCTCATCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAGCTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTGTCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCCTGCTCGTGCTGCCGCCGCCTCCGGCCT CCCCGCCGTCCCCGGCATCCATGGCCATCTCGCCGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTACTAAGAAGCCGTCGAAGCCGGCTAAGAAG AAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTCGGGC ]
consensusID : consensus_11333#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 797 fasta sequence
[CGCGGCGCCGGCATTCCCGGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCCGAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAGGTGCCTCCACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGTCCCAAGACGCTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGGCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAGGAGATGCAGCTCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGGCGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTCGTCGGCGCCGCTCTTCGCCGGCGCGGACGAATTCCTGATCCATAACCGCATAAGCCCGGACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATAAAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTGGGTACTCTTTATTTCTCAGCTTCTTAAGTTTCTTTTTTCTTTNNTTGAGAATTTTAGTGTTTTTCCCCCTTAGAAGCAGACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGATTNTTGNATGCAGGACTCTTAGAAGAAGAGGAACAGGAGCAGTTTTCATTGTTTCNNCNANAANNNNNNTNTNNNNNNNNNNNNN]
[+] EMBL BE040131 [CGCGGCGCCGGCATTCCCGGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCCGAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAGGTGCCTCCACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGTCCCAAGACGCTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGGCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAGGAGATGCAGCTCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGGCGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTCGTCGGCGCCGCTCTTCGCCGGCGCGGACGAATTCCTGATCCATAACCGCATAAGCCCGGACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATAAAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTGGGTACTCTTTATTTCTCAGCTTCTTAAGTTTCTTTTTTCTTTNNTTGAGAATTTTAGTGTTTTTCCCCCTTAGAAGCAGACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGATTNTTGNATGCAGGACTCTTAGAAGAAGAGGAACAGGAGCAGTTTTCATTGTTTCNNCNANAANNNNNNTNTNNNNNNNNNNNNN]
consensusID : consensus_11333#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 793 fasta sequence
[CGCGGCGCCGGCATTCCCGGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCCGAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAGGTGCCTCCACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGTCCCAAGACGCTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGGCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAGGAGATGCAGCTCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGGCGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTCGTCGGCGCCGCTCTTCGCCGGCGCGGACGAATTCCTGATCCATAACCGCATAAGCCCGGACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATAAAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTTGGTTACTCTTTATTTCTCAGCTTCTTAAGTTTCTTTTTTCTTTTTTTGAGATTTTTAGTGTTTTTTCCCCCTTAGAAGCAGACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGAATTTTGTAATGCAGGACTCTTAGAAGAAGAGGAAACAGGAGCAGTTTCAATTAGTTCAAAGCACCCGGTACTTTCTTTT]
[+] EMBL CA756833 [CGCGGCGCCGGCATTCCCGGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCCGAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAGGTGCCTCCACTGCGAGACGGACAAGACGCCGCAGTGGAGGACGGGGCCCATGGGTCCCAAGACGCTGTGCAACGCGTGCGGGGTGCGGTACAAGTCCGGGCGGCTCGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAGGAGATGCAGCTCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGGCGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTCGTCGGCGCCGCTCTTCGCCGGCGCGGACGAATTCCTGATCCATAACCGCATAAGCCCGGACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATAAAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTTGGTTACTCTTTATTTCTCAGCTTCTTAAGTTTCTTTTTTCTTTTTTTGAGATTTTTAGTGTTTTTTCCCCCTTAGAAGCAGACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGAATTTTGTAATGCAGGACTCTTAGAAGAAGAGGAAACAGGAGCAGTTTCAATTAGTTCAAAGCACCCGGTACTTTCTTTT]
consensusID : consensus_11333#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 632 fasta sequence
[ACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGGTAAATTCTTTGGCCACCTTTTGTCTTGTTAATTACCTTGGATTTTGCAGTAGAGGTGCCAATCATTTCTGGCAGCTCCTGCATATCACTTCTTCTGAAATTGTCGTCCCTTTCATTTGCTGAACTGATCTAAACTAGAGCTATGTATTTTATCATCTTGTTTTACGCCTCGAGAGAATTTGAATGCATTA]
[+] EMBL AK062377 [ACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACCGAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGCCGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCCTACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCACTTCGCCGTGGACGACCTCCTCGTGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGGAGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACTCGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGACGGCGACTTCCCCGGCGAGCTGTGCGAGCCGGTAAATTCTTTGGCCACCTTTTGTCTTGTTAATTACCTTGGATTTTGCAGTAGAGGTGCCAATCATTTCTGGCAGCTCCTGCATATCACTTCTTCTGAAATTGTCGTCCCTTTCATTTGCTGAACTGATCTAAACTAGAGCTATGTATTTTATCATCTTGTTTTACGCCTCGAGAGAATTTGAATGCATTA]
consensusID : consensus_11333#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 245 fasta sequence
[GCCCATCTAGAGATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGAACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTTTTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]
[+] EMBL CF308891 [GCCCATCTAGAGATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGAACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTTTTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGTACCGTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11333#0 TCTCTCCGCCCCGCCTCCCCTTCCGTCTCTCCGCGCTCCAGCTCCACGCCAATTAAACCC 60
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 TACTCCTCTTGCGTTGCGTTATCTGCGGTTCCGTCTCCCACTACTCGCGCACACGTAGAA 120
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------CGCGGCGCCGGCATTCCC 18
consensus_11333#2 ------------------------------------------CGCGGCGCCGGCATTCCC 18
consensus_11333#0 ACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACC 180
consensus_11333#3 ACGGAAGGAGAAACAAACAAAAGGCGCCGAGTAACGCAGATAGAGAGTTGTTTCCGCACC 60
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 GGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCC 78
consensus_11333#2 GGCCAAGAAGGCGGCGAAGTCCGCCAAGAAGAAGGACGGGCCGTCCCCCGCGCCGGCGCC 78
consensus_11333#0 GAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGC 240
consensus_11333#3 GAGCGCGTCCGCGGCAGTGTGTGTGTGTAGCGGTAGCGCACGCGCGGCTCGCGGGCGCGC 120
consensus_11333#4 -----------------------------------------GCCCATCTAG-AGATGAGT 18
consensus_11333#1 GAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAG-GTGCCTCCACTGCG-AGACGGAC 136
consensus_11333#2 GAACGCGGCCGCGCAGGCGGCGGCGGAGGGGAGGAG-GTGCCTCCACTGCG-AGACGGAC 136
* * * *
consensus_11333#0 CGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCC 300
consensus_11333#3 CGGTTGCACCAGCTGTGCGTTGCGGCGACGATGGAGGTGACGGCCGAGTTCGGCGGCGCC 180
consensus_11333#4 CGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAG--AAACCCTTGAACCAA 76
consensus_11333#1 AAGACGCCGCAGTGGAGGACGGGGCCCATGGGT--CCCAAGACGCTGTGCAACGCGTGCG 194
consensus_11333#2 AAGACGCCGCAGTGGAGGACGGGGCCCATGGGT--CCCAAGACGCTGTGCAACGCGTGCG 194
** * * * * * * *
consensus_11333#0 TACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCAC 360
consensus_11333#3 TACTACGGCGGCGCGGCGGGCCGCGAGAAGAAGGCGCTGCAGCAGGGGTGCGGGGACCAC 240
consensus_11333#4 AAAAAAAACAGAAGAACTGATATTTTCT--TAGGAGTTTCCCCA---GTTTTTGTCTCTT 131
consensus_11333#1 GGGTGCGGTACAAGTCCGGGCGGCTCGT-GCCGGAGTACCGGCCGGCGGCGAGCCCGACG 253
consensus_11333#2 GGGTGCGGTACAAGTCCGGGCGGCTCGT-GCCGGAGTACCGGCCGGCGGCGAGCCCGACG 253
* * ** * * * *
consensus_11333#0 TTCGCCGTGGACGACCTCCTCG--TGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGG 418
consensus_11333#3 TTCGCCGTGGACGACCTCCTCG--TGTTGCCCTACGGCGAGGAGGATGAAACAACAAGGG 298
consensus_11333#4 TTCCCTTCGTTTAGTTTGTGCG--CTTTTGCTCAAAAAAAAAAAAAAAAAAAAAAAAAAA 189
consensus_11333#1 TTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAG 313
consensus_11333#2 TTCGTGGTGTCCAAGCACTCCAACTCCCACCGCAAGGTGGTGGAGCTGCGGCGCCAGAAG 313
*** * * * * *
consensus_11333#0 AGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACT 478
consensus_11333#3 AGGGTGAGGCCACCGGCGGTAAGGAGGAGGCTGCCGGCTTTGGGAACGCGTCGGCGGACT 358
consensus_11333#4 AAAAAAAAA--AAAAAAAAAAAAAAAAAAAACCCCTGTCATGCCGTTACGT-ACCGTAT- 245
consensus_11333#1 GAGATGCAGC-TCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGG 372
consensus_11333#2 GAGATGCAGC-TCCTGCACCACCACCAGCAGCCGCCGCCGCACGTGGGCGCGGGCGGCGG 372
* * * ** **
consensus_11333#0 CGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGAC-GGCGAC 537
consensus_11333#3 CGTCGACCATAACGGCCCTGGATAGCTGCAGCAATTCCTTCGGCCTAGCCGAC-GGCGAC 417
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 CGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTC 432
consensus_11333#2 CGGCGCCGCCGGAGGGCTGCTCCACGTGACGAGCCCGCTGCTGTTCGACGGGCCGACGTC 432
consensus_11333#0 TTCCCCGGCGAGCTGTGCGAGCCGTACGATCAACTCGCGGAGCTGGAATGGCTATCCAAC 597
consensus_11333#3 TTCCCCGGCGAGCTGTGCGAGCCG----GTAAATTCTTTGGCC---ACCTTTTGTCTTGT 470
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 GTCGGCGCCGCTCTTCGCCGGCGCG--GACGAATTCCTGATCCATAACCGCATAAGCCCG 490
consensus_11333#2 GTCGGCGCCGCTCTTCGCCGGCGCG--GACGAATTCCTGATCCATAACCGCATAAGCCCG 490
consensus_11333#0 TATATGAACGAGGGAGACGACGCATTCGCCACCGAGGACCTCCAG--AAGCTGCAGCTCA 655
consensus_11333#3 TA-ATTACCTTGGATTTTGCAGTAGAGGT-GCCAATCATTTCTGG--CAGCTCCTGCATA 526
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 GACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATA 550
consensus_11333#2 GACTACCGGCGCCAGGCTACCTAGGAAACTATTCATTAGCCCAGGAATAATTCAGCGATA 550
consensus_11333#0 TCTCCGGCATCCCCTCCGGTGGGTTCTCGACGGCGAGCGTCCCGTCGGCTCAAGCTCAAG 715
consensus_11333#3 TC----ACTTCTTCTGAAATTG-TCGTCCCTTTCATTTGCTGAACTGATCTAAACTAGAG 581
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 AAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTGGGT-ACTCTTTATTTCTCAG 609
consensus_11333#2 AAAACAGCTAATTTTTTTTTGTCCTGCAAACCGCATTTTTGGTTACTCTTTATTTCTCAG 610
consensus_11333#0 CTGCGTCGGCGGCTGCCTCCATGGCAGTGCAGCCCGGCGGCTTCCTGCCGGAGGCCCCTG 775
consensus_11333#3 CTATGTATTTTATCATCTT----GTTTTACGCCTCGAGAGAATTTGAATGCATTA----- 632
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 CTTCTTAAGTTTCTTTTTTCTTTNNTTGAGAATTTTAGTGTTTTT-CCCCCTTAGAAGCA 668
consensus_11333#2 CTTCTTAAGTTTCTTTTTTCTTTTTTTGAGATTTTTAGTGTTTTTTCCCCCTTAGAAGCA 670
consensus_11333#0 TCCCCGCCAAGGCACGAAGCAAGCGCTCCCGCGCTGCGCCTGGCAACTGGTCGTCCCGCC 835
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 GACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGATTNTTGNA-TGCAGGA 727
consensus_11333#2 GACTCTGAGGAGTTTCTTTCGTAGCACATTTTTTTTTCTTTTGAATTTTGTAATGCAGGA 730
consensus_11333#0 TGCTCGTGCTGCCGCCGCCTCCGGCCTCCCCGCCGTCCCCGGCATCCATGGCCATCTCGC 895
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 CTCTTAGAAGAAGAGGAA-CAGGAGCAGTTTTCATTGTTTCNNCNANAANNNNNNTNTNN 786
consensus_11333#2 CTCTTAGAAGAAGAGGAAACAGGAGCAGTTTCAATTAGTTCAA-AGCACCCGGTACTTTC 789
consensus_11333#0 CGGCGGAGTCTGGCGTGTCGGCGCATGCGTTCCCTATTAAGAAGCCGTCGAAGCCGGCTA 955
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 NNNNNNNNNNN------------------------------------------------- 797
consensus_11333#2 TTTT-------------------------------------------------------- 793
consensus_11333#0 AGAAGAAGACGCGCCGGCGCCACCGGCGCAGGCGCAGCTCTCGAGCGTGCCGGTGCACTC 1015
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 GGGCGGCTCGGCGCCAGCGGCCGCGGCCGGGGAAGGGAGGCGGTGCCTGCACTGCGAGAG 1075
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 CTTACAAGACGCCACAGTGGAGGACGGGGCCGATGGGGCCCAAGACACTGTGCAACGCGT 1135
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 GCGGGGTGCGGTACAAGTCCGGGCGACTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCCA 1195
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 CCTTCATGGTATCGAAGCACTCCAACTCCCACCGCAAGGTGCTGGAGCTGCGCCGGCAGA 1255
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 AGGAGATGCACCAGCAGACGCCGCATCATCACCAGCCGCAGGTGGCCGCCGCCGGTGGAG 1315
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 TGGGGAGCCTAATGCACATGCAGAGCTCCATGCTGTTCGACGGAGTGTCGCCCGTCGTGA 1375
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 GCGGCGACGACTTCTTGATCCACCACCACCTAAGGACAGACTTCCGGCCGCCCATCTAGA 1435
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 GATGAGTCGTGTGCTAGAATTGATCAATTAGCCCATGAATAATCTAAAAGAAACCCTTGA 1495
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 ACCAAAAAAAAAACAGAAGAACTGATATTTTCTTAGGAGTTTCCCCAGTTTTTGTCTCTT 1555
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 TTCCCTTCGTTTAGTTTGTGCGCTTTTGCTCAGCTCGTCGAATTTTTCGTGTCAATTTTG 1615
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 TTTATGATGCTCTTTAAGTTTACCACCTTTTCTAGCCGGGAGTTGATTTCTCTAGCTTCT 1675
consensus_11333#3 ------------------------------------------------------------
consensus_11333#4 ------------------------------------------------------------
consensus_11333#1 ------------------------------------------------------------
consensus_11333#2 ------------------------------------------------------------
consensus_11333#0 ACTTATCTTCCTCTCTATCTTGCCATTTAATTTGTAACGCATTTCAAGGTACTTAAAT 1733
consensus_11333#3 ----------------------------------------------------------
consensus_11333#4 ----------------------------------------------------------
consensus_11333#1 ----------------------------------------------------------
consensus_11333#2 ----------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||