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Oryza sativa
cluster # 11399 cluster # 11399       Sequences # 9       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11399#0 length = 2546 sequences # 7  
 consensus_11399#1 length = 2414 sequences # 1  
consensus_11399#2 length = 549 sequences # 1  
consensusID : consensus_11399#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2546
fasta sequence 
                              [ACACTGACAAGCTCATCACTCCACCAGCCAGCTTGAGCTCGCCCACTTCCGCTCACAAGAAGCACAACCGCGAGCTACCACAGCATCGGATCGAGGGCGAGCGGCGGCGGAGGCGGCGGAATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGGGGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTCGGCACAACCGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATCGTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGACAGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTGCAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTCCTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGTTGCCACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGATCCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATGACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCGCTCGCGAAAGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGAAAGGGTTCTTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTTTTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTC-ATGGAGACACTGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK071744             [ACACTGACAAGCTCATCACTCCACCAGCCAGCTTGAGCTCGCCCACTTCCGCTCACAAGAAGCACAACCGCGAGCTACCACAGCATCGGATCGAGGGCGAGCGGCGGCGGAGGCGGCGGAATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGGGGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTCGGCACAACCGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATCGTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGACAGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTGCAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTCCTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGTTGCCACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGATCCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATGACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCGCTCGCGAAAGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGAAAGGGTTCTTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTTTTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTC ATGGAGACACTGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCA                                             ]
[+] EMBL CF324591             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGACAGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTGCAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTCCTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU065195             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCGTTATTTTGTTGTTGCCACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGATCCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATGACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCNANTTCTCCGAAA GACTGCAATACAGAATGTNGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTANACCCCTCATANTGGTATTGCCATCTTTTTCCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CB000826             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCGGGAAAGGGTTCTTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTTTTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTC ATGGAGACACTGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAGTAC                                                                        ]
[+] EMBL CB000827             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACCGGGAAAGGGTTCTTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTTTTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTC ATGGAGACACTGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAG                                                                           ]
[+] EMBL AU095189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ACGCGCAGTACGCTCCCCCTCTCCTCNATGGAGACACTGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCAAAAAAAAAAAAAAA                               ]
[+] EMBL CF333682             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGATGCTGAATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTTACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_11399#0
ACACTGACAAGCTCATCACTCCACCAGCCAGCTTGAGCTCGCCCACTTCCGCTCACAAGA
AGCACAACCGCGAGCTACCACAGCATCGGATCGAGGGCGAGCGGCGGCGGAGGCGGCGGA
ATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGG
GGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTCGGCACAAC
CGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATC
GTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATGAACTAGAC
TACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTT
AGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAAC
CTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTA
AACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGAC
AGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTG
CAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTT
ATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATC
GACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTC
CTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGA
CTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGTTGCC
ACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTT
TATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGAT
CCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATG
ACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATA
GCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATT
TTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACA
CTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCA
TATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTAC
ACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAA
TTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCA
CGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGAAGCGGTTG
TTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGG
GTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCGCTCGCGAA
AGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGG
ACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGAAAGGGTTC
TTCAAAGCTTCTGTTCTTGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAA
GTTAACGTCATTGGAGATGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGT
GCGCTCTTTGCGTTCCTTATGTTAGACACACACAAATACAAGTCCGCACATAACAAGATA
TCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCCCTTGGTTTCATAGTTGCCAAGCTT
TTCTTCCAGGTCGTCGAGATGTCGATTGACACCATAATCCTCTCATTCTGCCAAGATGCA
GAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTCATGGAGACACTGGATGAA
CAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTCTTC
TTGCAAGTAGAATTAAGTCGAAATGAAGAAATCAAGTAGAAGCCTGGTTATTATGTAATC
ATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTAGTAGTGCACTCTGATGCTG
AATGTCTGGTCTCTAGCGTGACCAATACCCTTGGCTTGGTCTAACGTATGTACTACTTTT
ACTTAGTTAAGTACAATGTTAGTGAAGAAGGTTATATCTCAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_11399#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2414
fasta sequence 
                              [ATCGCTCGCTGTCTCGCTCAAGCGCGACCTACCACAGCATCGGATCGAAGCGAGCGGCGGCGGAATGGGAGGGCCGCTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGGGAGGATGAGCTGGGAGGTGGCGGCGGCGGCGGAGATGGAGGCGGCATCATTCGGCACAACCGGCGGTGCCGGGATTTGGCCTTCCTGGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATCGTCAACTCTAGCTTCGGATTCAACCAGGGCAATCCACTCAGGCTTACCTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGATCAACAGGGACTATGATTATTTTGAGTTTCTCGCACCAGATATGAGAAATAGTTCTCTTCAGCTGCAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTCAGTCTTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGCTGCCATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAGTGATCCATATGTGCATATAACTGGACGGGAAATAAGCCACCTTCATGCTGCTACGGTGGTGATGACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCTTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCCCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCGTGAAAGCTGCTTTGGTAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATAGCCATTACTGGGAAAGGGTTCTTCAAAGCTTCTGTTCTCGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGACGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCCTTCCTTATGTTAGACACTCACAAGTACAAGTCTGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCACTTGGTTTTATAGTCGCCAAGCTTTTCTTCCAAGTCGTCGAGATGTCGATCGACACCATAATCCTCTCCTTCTGTCAAGATTCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTAGTGGAGACACTGGATGAACAGAGTGAACTCCATAGACTAACTCAAGGGCCTTGACTTTTCTTCTTCTTGCAAGTAGAATTAAGTCAGAATGGAGAAATTAAGTAGAAGCCTTGTCATTATGTTCTTTGTTGCTGGCTAGTGGGTAATTTCACCATTTTGGTAGTGCACTCTGATGCTGAAAGTCTGGTCTATAGCGTGACTAGTACCCCTGGCCTGATCTAACGTATGTACTCCTACTATACTTTGCTAATACAATGATAGTGAAGAA]

[+] EMBL AK105243             [ATCGCTCGCTGTCTCGCTCAAGCGCGACCTACCACAGCATCGGATCGAAGCGAGCGGCGGCGGAATGGGAGGGCCGCTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGGGAGGATGAGCTGGGAGGTGGCGGCGGCGGCGGAGATGGAGGCGGCATCATTCGGCACAACCGGCGGTGCCGGGATTTGGCCTTCCTGGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATCGTCAACTCTAGCTTCGGATTCAACCAGGGCAATCCACTCAGGCTTACCTATGAACTAGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGGATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGATCAACAGGGACTATGATTATTTTGAGTTTCTCGCACCAGATATGAGAAATAGTTCTCTTCAGCTGCAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTTATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAACATCGACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTCAGTCTTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGCTGCCATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTTTTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAGTGATCCATATGTGCATATAACTGGACGGGAAATAAGCCACCTTCATGCTGCTACGGTGGTGATGACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACTGATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATTTTCCCAGTTGTGCCATACTTTATCTTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAATTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCACGTGGTGAAATATCCCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCGGTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCGTGAAAGCTGCTTTGGTAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATAGCCATTACTGGGAAAGGGTTCTTCAAAGCTTCTGTTCTCGCAACTGGTTTGATCATGAATAACATACTGCGCATTGGAAAAGTTAACGTCATTGGAGACGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTTCTGTGCGCTCTTTGCCTTCCTTATGTTAGACACTCACAAGTACAAGTCTGCACATAACAAGATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCACTTGGTTTTATAGTCGCCAAGCTTTTCTTCCAAGTCGTCGAGATGTCGATCGACACCATAATCCTCTCCTTCTGTCAAGATTCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTAGTGGAGACACTGGATGAACAGAGTGAACTCCATAGACTAACTCAAGGGCCTTGACTTTTCTTCTTCTTGCAAGTAGAATTAAGTCAGAATGGAGAAATTAAGTAGAAGCCTTGTCATTATGTTCTTTGTTGCTGGCTAGTGGGTAATTTCACCATTTTGGTAGTGCACTCTGATGCTGAAAGTCTGGTCTATAGCGTGACTAGTACCCCTGGCCTGATCTAACGTATGTACTCCTACTATACTTTGCTAATACAATGATAGTGAAGAA]




>consensus_11399#1
ATCGCTCGCTGTCTCGCTCAAGCGCGACCTACCACAGCATCGGATCGAAGCGAGCGGCGG
CGGAATGGGAGGGCCGCTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGG
CGGGGAGGATGAGCTGGGAGGTGGCGGCGGCGGCGGAGATGGAGGCGGCATCATTCGGCA
CAACCGGCGGTGCCGGGATTTGGCCTTCCTGGTGCTCTTCGCGGCCTTCTGGGTCGCCAT
GATCGTCAACTCTAGCTTCGGATTCAACCAGGGCAATCCACTCAGGCTTACCTATGAACT
AGACTACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGA
TGTTAGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGAT
TAACCTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGG
ATTAAACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGAT
CAACAGGGACTATGATTATTTTGAGTTTCTCGCACCAGATATGAGAAATAGTTCTCTTCA
GCTGCAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCA
ATTTATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAA
CATCGACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTC
AGTCTTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGG
TGGACTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGC
TGCCATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTT
TTTTTATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAG
TGATCCATATGTGCATATAACTGGACGGGAAATAAGCCACCTTCATGCTGCTACGGTGGT
GATGACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACT
GATAGCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAAT
TATTTTCCCAGTTGTGCCATACTTTATCTTCGCTATCTTTTATATGTTCTGGTTTTCTGC
CACACTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTG
CTCATATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCA
TTACACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAAC
CCAATTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTG
GGCACGTGGTGAAATATCCCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCG
GTTGTTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGA
GTGGGTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCG
TGAAAGCTGCTTTGGTAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGA
CTGGACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATAGCCATTACTGGGAAAGG
GTTCTTCAAAGCTTCTGTTCTCGCAACTGGTTTGATCATGAATAACATACTGCGCATTGG
AAAAGTTAACGTCATTGGAGACGTCATCCTCTTTCTGGGGAAGCTCTGTGTGAGCTTGTT
CTGTGCGCTCTTTGCCTTCCTTATGTTAGACACTCACAAGTACAAGTCTGCACATAACAA
GATATCATCTCCTCTTGTTCCTGTAGTGGTATCATGGGCACTTGGTTTTATAGTCGCCAA
GCTTTTCTTCCAAGTCGTCGAGATGTCGATCGACACCATAATCCTCTCCTTCTGTCAAGA
TTCAGAAGAGCACCAAGGGAACGCGCAGTACGCTCCCCCTCTCCTAGTGGAGACACTGGA
TGAACAGAGTGAACTCCATAGACTAACTCAAGGGCCTTGACTTTTCTTCTTCTTGCAAGT
AGAATTAAGTCAGAATGGAGAAATTAAGTAGAAGCCTTGTCATTATGTTCTTTGTTGCTG
GCTAGTGGGTAATTTCACCATTTTGGTAGTGCACTCTGATGCTGAAAGTCTGGTCTATAG
CGTGACTAGTACCCCTGGCCTGATCTAACGTATGTACTCCTACTATACTTTGCTAATACA
ATGATAGTGAAGAA

consensusID : consensus_11399#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 549
fasta sequence 
                              [CTGTTGCTTGCCACTTGGTTTGATGCATTGAATAACATACTGCGCCATTGCGACAAGTTGAACGTGCATTGGGAGATGTCATGCCTCTTTCTTGGAAGCTCTGTGTAGAGCTTGTTGCTGGGGCGCTCTTTGGCGTTGCCTTATGTTACGACACACAGCAAATGACAAGTGCCTGCACATTACAAGATGATCATGTGCTGCTTGTTGCCTGTGAGTTGTATGCATGGGGCCCTTGGGTTTCATAGTTGGCCAAGCTTTTGTTGCCAGGTGCGTGCGAGATGTCGATTGACACCATGAATCCTCTCATTGCTGGCCAAGATGGCAGAAGAGCACCATAGGGAACGCGCAGTACGCTCCCCCTCTCCTCATGGAGACACTGGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGGAAGAAATCAAGTAGATGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTA]

[-] EMBL BU672839             [CTGTTGCTTGCCACTTGGTTTGATGCATTGAATAACATACTGCGCCATTGCGACAAGTTGAACGTGCATTGGGAGATGTCATGCCTCTTTCTTGGAAGCTCTGTGTAGAGCTTGTTGCTGGGGCGCTCTTTGGCGTTGCCTTATGTTACGACACACAGCAAATGACAAGTGCCTGCACATTACAAGATGATCATGTGCTGCTTGTTGCCTGTGAGTTGTATGCATGGGGCCCTTGGGTTTCATAGTTGGCCAAGCTTTTGTTGCCAGGTGCGTGCGAGATGTCGATTGACACCATGAATCCTCTCATTGCTGGCCAAGATGGCAGAAGAGCACCATAGGGAACGCGCAGTACGCTCCCCCTCTCCTCATGGAGACACTGGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTTGATCTTTTCTTTATTTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGGAAGAAATCAAGTAGATGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTCACCATTTTA]




>consensus_11399#2
CTGTTGCTTGCCACTTGGTTTGATGCATTGAATAACATACTGCGCCATTGCGACAAGTTG
AACGTGCATTGGGAGATGTCATGCCTCTTTCTTGGAAGCTCTGTGTAGAGCTTGTTGCTG
GGGCGCTCTTTGGCGTTGCCTTATGTTACGACACACAGCAAATGACAAGTGCCTGCACAT
TACAAGATGATCATGTGCTGCTTGTTGCCTGTGAGTTGTATGCATGGGGCCCTTGGGTTT
CATAGTTGGCCAAGCTTTTGTTGCCAGGTGCGTGCGAGATGTCGATTGACACCATGAATC
CTCTCATTGCTGGCCAAGATGGCAGAAGAGCACCATAGGGAACGCGCAGTACGCTCCCCC
TCTCCTCATGGAGACACTGGGATGAACAGAGTGAACTCCAAAGACTAACTCAAGGACCTT
GATCTTTTCTTTATTTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATGGAAGAAAT
CAAGTAGATGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGGGTAATTTC
ACCATTTTA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11399#0      ACACTGACAAGCTCATCACTCCACCAGCCAGCTTGAGCTCGCCCACTTCCGCTCACAAGA 60
consensus_11399#1      -------------------------------------ATCGCTCGCTGTCTCGCTCAAG- 22
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AGCACAACCGCGAGCTACCACAGCATCGGATCGAGGGCGAGCGGCGGCGGAGGCGGCGGA 120
consensus_11399#1      --------CGCGACCTACCACAGCATCGGATCGAAG-CGAGCGGCGGCGG---------A 64
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ATGGGAGGGCCACTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGG 180
consensus_11399#1      ATGGGAGGGCCGCTCGGCGCCATCATAGGCAGGCACCCGGCGGCGGCGGGCGGCGGCGGG 124
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      GGGGATGAGCTGGGAGGTGTCGGCGGCGGCGGCGGCGGGGATGGCATCATTCGGCACAAC 240
consensus_11399#1      GAGGATGAGCTGGGAGGTGGCGGCGGCGGCGGAGATGGAGGCGGCATCATTCGGCACAAC 184
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CGGAGGTGCCGGGATTTGGCCTTCCTCGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATC 300
consensus_11399#1      CGGCGGTGCCGGGATTTGGCCTTCCTGGTGCTCTTCGCGGCCTTCTGGGTCGCCATGATC 244
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      GTCAACTCCAGCTTCGGATTCAACCAGGGCAACCCACTCAGGCTTACTTATGAACTAGAC 360
consensus_11399#1      GTCAACTCTAGCTTCGGATTCAACCAGGGCAATCCACTCAGGCTTACCTATGAACTAGAC 304
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTT 420
consensus_11399#1      TACAAAGGGAACATTTGTGGCAGTAGGCATGGTGACCCGGATTTGCATGAGCTTGATGTT 364
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAAC 480
consensus_11399#1      AGATATTGGATGAACCCAAACCAGGTGTACCAAAGTGGGGTCAAGGACAACAAGATTAAC 424
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATGCCAGCAGCAGACGGATTA 540
consensus_11399#1      CTTGCTGATGCCAAAGCCATCTGCCTGATGGAGTGCCCCATTCCAGCAGCAGACGGATTA 484
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTGTCTGTCGATGATTGGATCGAC 600
consensus_11399#1      AACTTTGTTTGTGATTATCCAGAAGGGGACATTCGCCTCTCTATCGATGATTGGATCAAC 544
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AGGGACTATGACTATTTTGAGTTTCTCACACCAGATATGAGAAATAGTTCTCTTCAACTG 660
consensus_11399#1      AGGGACTATGATTATTTTGAGTTTCTCGCACCAGATATGAGAAATAGTTCTCTTCAGCTG 604
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CAGGGTCCATGCTACCCTGTTATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTT 720
consensus_11399#1      CAGGGTCCATGCTACCCTGTCATATTTCCAAGTGTGAATGTCTACTGGAGCTGCCAATTT 664
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ATTGCGCGAGCATCAAATGTCTCTTTGAAGCATTGGCAACAGATGGGTGGTATCAACATC 780
consensus_11399#1      ATTGCGCGAGCATCCAATGTCTCTTTGAAGCATTGGCAGCAGATGGGTGGTATCAACATC 724
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      GACGAAAATATTCTCATAGATAAAACAATCCACAAGGCCATCAATTCTAAATCTTCAGTC 840
consensus_11399#1      GACGAAAATATTCTCATAGATAAAACAATACACAAGGCCATCAATTCTAAATCTTCAGTC 784
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGA 900
consensus_11399#1      TTGAAGAGATACGTTGCTGACATTGGGAAGTCATGGCCTGTGTTAATTGTTTGCGGTGGA 844
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGTTGCC 960
consensus_11399#1      CTGCTCCCTCTTTTCTTGTCAGTTATCTGGTTGCTTCTGATTCGTTATTTTGTTGCTGCC 904
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ACGCCATGGATAACTGTAGTGGTTTTCAATGCTCTAGTAATCTCTGTTACCATGTTTTTT 1020
consensus_11399#1      ATGCCATGGATAACTGTAGTGCTCTTCAATGCTCTAGTAATCTCCGTTACTATGTTTTTT 964
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTAACAGTTGTAATTGGCGAAAGTGAT 1080
consensus_11399#1      TATATTAAAGCTGGCTGGTTAGGCAATGATCCCTTGACAGTTGTAATTGGTGAAAGTGAT 1024
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CCATATGTCCACATAACTGGGCGGGAAATAAGCCACCTTCATGCTGCTACAGTGGTGATG 1140
consensus_11399#1      CCATATGTGCATATAACTGGACGGGAAATAAGCCACCTTCATGCTGCTACGGTGGTGATG 1084
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ACAGTAGTAATGATTATTGCATTTCTGACCTCCATAGCTATTATCCGTCGTATACTGATA 1200
consensus_11399#1      ACAGTTGTAATGATCATTGCATTTCTGTCCTCCATAGCTATTATCCGGCGTATACTGATA 1144
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      GCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATT 1260
consensus_11399#1      GCAACACCTGTCCTGAAGGTTGCTGCGAAGGTCATTGGTGAAGTTCAGGCACTAATTATT 1204
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TTCCCAGTTGTGCCATACTTTATCCTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACA 1320
consensus_11399#1      TTCCCAGTTGTGCCATACTTTATCTTCGCTATCTTTTATATGTTCTGGTTTTCTGCCACA 1264
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCA 1380
consensus_11399#1      CTCCATCTCTTCAGCTCTGGTCAAGTTCTCCGAAATGACTGCAATACAGATTGTTGCTCA 1324
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTAC 1440
consensus_11399#1      TATGATCTGAAGTTGGGCAAAGTAAACTGTGACAACTGCTGTGGGTACAGCATCCATTAC 1384
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAA 1500
consensus_11399#1      ACCCCTCATATTGGTATTGCCATTCTTTTCCACTTATTTGGCTGTTACTGGGCAACCCAA 1444
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TTCTTTATTGCTTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCA 1560
consensus_11399#1      TTCTTTATTGCGTGCTCTTCAACCGTGATTGCTGGATCAGTTGCTTCATACTATTGGGCA 1504
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      CGTGGTGAAATATCTCATGACATACCATTTGTTACAGTTGTTTCTTCAATGAAGCGGTTG 1620
consensus_11399#1      CGTGGTGAAATATCCCATGACATACCATTTGTTACAGTTGTTTCTTCATTGAAGCGGTTG 1564
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGG 1680
consensus_11399#1      TTGCGTTACAGCCTTGGTTCAGTTGCTATAGGTTCACTTGTTGTATCTGCTGTTGAGTGG 1624
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      GTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTAGTTGATTCCGCTCGCGAA 1740
consensus_11399#1      GTGCGGTTTATACTAGAATGCCTCAGACGCAAGTTGAAGCTATTTGATTCCGCTCGTGAA 1684
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AGCTGCTTTGGGAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGG 1800
consensus_11399#1      AGCTGCTTTGGTAAAATGACATCATCCTCTTCTCAATGCTGCCTGGGCTGCATAGACTGG 1744
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      ACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATCGCCATTACCGGGAAAGGGTTC 1860
consensus_11399#1      ACCCTCAAGTCTGTGAATCGAAATGCCTATATAATGATAGCCATTACTGGGAAAGGGTTC 1804
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TTCAAAGCTTCTGTTCTTGCAACTGGTTTGAT-CAT-GAATAACATACTGCGC-ATTG-G 1916
consensus_11399#1      TTCAAAGCTTCTGTTCTCGCAACTGGTTTGAT-CAT-GAATAACATACTGCGC-ATTG-G 1860
consensus_11399#2      -------CTGTTGCTTGC-CACTTGGTTTGATGCATTGAATAACATACTGCGCCATTGCG 52
                              **  ** *    **  ********* *** **************** **** *

consensus_11399#0      AAAAGTT-AACGT-CATTGG-AGATGTCATCCTCTTTCTGGGGAAGCTCTGTGT-GAGCT 1972
consensus_11399#1      AAAAGTT-AACGT-CATTGG-AGACGTCATCCTCTTTCTGGGGAAGCTCTGTGT-GAGCT 1916
consensus_11399#2      ACAAGTTGAACGTGCATTGGGAGATGTCATGCCTCTTTCTTGGAAGCTCTGTGTAGAGCT 112
                       * ***** ***** ****** *** ***** *   **    ************* *****

consensus_11399#0      TGTTCT--GTGCGCTCTTTGCGTT--CCTTATGTTA-GACACACA-CAAAT-ACAAGT-- 2023
consensus_11399#1      TGTTCT--GTGCGCTCTTTGCCTT--CCTTATGTTA-GACACTCA-CAAGT-ACAAGT-- 1967
consensus_11399#2      TGTTGCTGGGGCGCTCTTTGGCGTTGCCTTATGTTACGACACACAGCAAATGACAAGTGC 172
                       ****    * **********   *  ********** ***** ** *** * ******  

consensus_11399#0      CCGCACATAACAAGAT-ATCATCTCCT-CTTGTT-CCTGT-AGTGGTAT-CATGGGCCCT 2078
consensus_11399#1      CTGCACATAACAAGAT-ATCATCTCCT-CTTGTT-CCTGT-AGTGGTAT-CATGGGCACT 2022
consensus_11399#2      CTGCACATTACAAGATGATCATGTGCTGCTTGTTGCCTGTGAGTTGTATGCATGGGGCCC 232
                       * ****** ******* ***** * ** ****** ***** *** **** ******  * 

consensus_11399#0      T--GGTTTCATAGTTG-CCAAGCTTTTCTT-CCAGGT-CGT-CGAGATGTCGATTGACAC 2132
consensus_11399#1      T--GGTTTTATAGTCG-CCAAGCTTTTCTT-CCAAGT-CGT-CGAGATGTCGATCGACAC 2076
consensus_11399#2      TTGGGTTTCATAGTTGGCCAAGCTTTTGTTGCCAGGTGCGTGCGAGATGTCGATTGACAC 292
                       *  ***** ***** * ********** ** *** ** *** ************ *****

consensus_11399#0      CAT-AATCCTCTCATTCT--GCCAAGATG-CAGAAGAGCACCA-AGGGAACGCGCAGTAC 2187
consensus_11399#1      CAT-AATCCTCTCCTTCT--GTCAAGATT-CAGAAGAGCACCA-AGGGAACGCGCAGTAC 2131
consensus_11399#2      CATGAATCCTCTCATTGCTGGCCAAGATGGCAGAAGAGCACCATAGGGAACGCGCAGTAC 352
                       *** ********* **    * ******  ************* ****************

consensus_11399#0      GCTCCCCCTCTCCTCATGGAGACACTGG-ATGAACAGAGTGAACTCCAAAGACTAACTCA 2246
consensus_11399#1      GCTCCCCCTCTCCTAGTGGAGACACTGG-ATGAACAGAGTGAACTCCATAGACTAACTCA 2190
consensus_11399#2      GCTCCCCCTCTCCTCATGGAGACACTGGGATGAACAGAGTGAACTCCAAAGACTAACTCA 412
                       **************  ************ ******************* ***********

consensus_11399#0      AGGACCTTGA-TCTTTTCTTTATTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATG 2305
consensus_11399#1      AGGGCCTTGA-C------------TTTTCTTCTTCTTGCAAGTAGAATTAAGTCAGAATG 2237
consensus_11399#2      AGGACCTTGATCTTTTCTTTATTTTTTTTTTCTTCTTGCAAGTAGAATTAAGTCGAAATG 472
                       *** ******              **** *************************  ****

consensus_11399#0      AA-GAAATCAAGTAGAAGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGG 2364
consensus_11399#1      GA-GAAATTAAGTAGAAGCCTTGTCATTATGT--------TCTTTGTTGCTGGCTAGTGG 2288
consensus_11399#2      GAAGAAATCAAGTAGATGCCTGGTTATTATGTAATCATGTTCCATGTTGCTGGGTAGTGG 532
                        * ***** ******* **** ** *******        **  ********* ******

consensus_11399#0      GTAATTTCACCATTTTAGTAGTGCACTCTGATGCTGAATGTCTGGTCTCTAGCGTGACCA 2424
consensus_11399#1      GTAATTTCACCATTTTGGTAGTGCACTCTGATGCTGAAAGTCTGGTCTATAGCGTGACTA 2348
consensus_11399#2      GTAATTTCACCATTTTA------------------------------------------- 549
                       ****************                                            

consensus_11399#0      ATACCCTTGGCTTGGTCTAACGTATGTACTACT--TTTACTTAGTTAAGTACAATGTTAG 2482
consensus_11399#1      GTACCCCTGGCCTGATCTAACGTATGTACTCCTACTATACTTTGCTAA-TACAATGATAG 2407
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      TGAAGAAGGTTATATCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2542
consensus_11399#1      TGAAGAA----------------------------------------------------- 2414
consensus_11399#2      ------------------------------------------------------------
                                                                                   

consensus_11399#0      AAAA 2546
consensus_11399#1      ----
consensus_11399#2      ----


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)