cluster # 11442

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Oryza sativa
cluster # 11442 cluster # 11442 Sequences # 9 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11442#0 length = 1676 sequences # 6
consensus_11442#1 length = 901 sequences # 1

consensus_11442#2 length = 728 sequences # 1
consensus_11442#3 length = 678 sequences # 1

consensusID : consensus_11442#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1676
fasta sequence

                              [TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAACACTCTCTTAGATTACCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT]

[+] EMBL AK105954             [TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAACACTCTCTTAGATTACCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT]
[+] EMBL CB642955             [                                                          GCATGGCTTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGACACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB645838             [                                                               GCGTCCACTGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCATGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB651848             [                                                                                                                                                                              ACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCACGGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCCGTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAAGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA753188             [                                                                                                                                                                                                                                                                                                                                                                                                                          CGACACCTACCTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACCATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGACCGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCATCAGTCAGGCTCTCGGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACAACGGAGGCGTTCGTCAACGTGCGTGAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAGCTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTTGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCG CGGCGGCAACGGGTTGGGTGTGCCGT NTGCGA CAGCT GGCGT CTGTG CA CGTTCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB651849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTCGGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAGCACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGCGTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGAGGGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATGGAAGAGAA                                                                                                            ]




>consensus_11442#0
TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGC
ATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCAC
ATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTC
ACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACG
CTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCAC
GGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCC
GTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTAC
CTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACC
ATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGAC
CGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCA
TCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACA
ACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAG
CTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTC
GGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAG
CACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGC
GTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCGCGACAGCGCG
GTCAGGTTCTTCTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCC
GGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCC
GTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGC
GTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCC
GACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGC
GGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGAC
GACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGC
GCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAA
GATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAA
GTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCCACGTGGAGAATAATG
GAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTAT
CGAAACACTCTCTTAGATTACCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT

consensusID : consensus_11442#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 901
fasta sequence

                              [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTCATCCACTCCGAGCACTGGCGCGGCGCCGACCCCGCCGGCTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGCCGTNAGCAGCTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTTACTTGCTTGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGNGGCAGTCTTATGGCGCCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACAACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAATACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCGCGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAATATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG]

[+] EMBL AW155435             [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTCATCCACTCCGAGCACTGGCGCGGCGCCGACCCCGCCGGCTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGCCGTNAGCAGCTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTTACTTGCTTGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGNGGCAGTCTTATGGCGCCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACAACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAATACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCGCGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAATATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG]




>consensus_11442#1
CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTTGTTCTCCTTTGTTTGC
TCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCA
AAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGC
AGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCG
GTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCG
GCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTG
GCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATC
CTCAACGTCATCCACTCCGAGCACTGGCGCGGCGCCGACCCCGCCGGCTCTTCGAGGCCG
TGGACGCCAAGATGGGGGTGCCGTNAGCAGCTGCTCACCGGCTGAGCGGAGGCCCGANCG
ATCGTGGCCACACTTACTTGCTTGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTC
TTGTGATATGGNGGCAGTCTTATGGCGCCTACACATCCACAGTGCCGCGTGATACCGGAG
GCACAAACAACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGG
ACGGAAAATACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGG
GAAGGTGCGCGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATT
ATGCTTAATATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATA
G

consensusID : consensus_11442#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 728
fasta sequence

                              [GGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCGCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAACACTCTCTTAGATTATCCAGCCTTAAAAAAAAGA]

[-] EMBL CB642956             [GGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGACAGCGCCAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAACTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGATCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGCCGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTGTGTATCAGTATCGCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAACACTCTCTTAGATTATCCAGCCTTAAAAAAAAGA]




>consensus_11442#2
GGTCGCCGTGGCGCTGCGCGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGACAGCGC
CAGCGCCGGTGACCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGA
CCAGCTGGGCGTGCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTGCGGGTGGAA
CTCGCTGCTCGAGGCCGTGTTCGCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGA
TCAGGTGGTGGACGCCCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCTGTCGGA
GCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGATCCGTGC
CGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAGGAGGGC
CGCGCTGCTGCGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGTGGCTCGTC
GCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGGAGACTTAATTTCCAGTG
AGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGTGAATGCTTGTTG
TGTATCAGTATCGCACGTGGAGAATAATGGAAGAGAAAATTTTACTTTAGGTAATCTGTT
GTACGAGGCAAACATCATCCCTGTTGTATCGAAACACTCTCTTAGATTATCCAGCCTTAA
AAAAAAGA

consensusID : consensus_11442#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 678
fasta sequence

                              [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTCATTCCCTCCGAGCACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGTGGTGGCCGTNTACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTTTCCTTCTGTTGGGCGTACGACTAGACAGGACCGAATCCATTATCTTATTTTACACAAACCGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGTTAAAGAAT]

[+] EMBL AW155496             [CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTCATTCCCTCCGAGCACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGTGGTGGCCGTNTACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTTTCCTTCTGTTGGGCGTACGACTAGACAGGACCGAATCCATTATCTTATTTTACACAAACCGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGTTAAAGAAT]




>consensus_11442#3
CGGTTGCTACGACGGTGGGAGCAGAAGAAATGACAAGCCAATTGGGTCTCCTTTGTTTGC
TCTGACCTCCCAATTCACAGCTGGGTCTATGTATCACTTATCAAGTACTACAGTGTATCA
AAAGCTCTCCAATCTGTGCTGCCTTTATATTAGTTCCACCAAGAAGACACAAATTCCAGC
AGAGATAGTCCGATAGAGATTAGCATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCG
GTGCCGTACCCGGGCCGCGGCCACATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCG
GCCGCGGACGGCGAGCTCACCGTCACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTG
GCCTCCGCCGGTGTGCCCGCCACGCTGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATC
CCCAACGTCATTCCCTCCGAGCACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCC
GTGGACGCCAAGATGGTGGTGGCCGTNTACAAATTGTTAAACGGTTGAACGGAGGACCGA
ATCAATAGAGTCCAACTTTCCTTCTGTTGGGCGTACGACTAGACAGGACCGAATCCATTA
TCTTATTTTACACAAACCGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAA
TACATGGTGTTAAAGAAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      TTATATTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGC 60
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ATGGCGTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCAC 120
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ATCAACCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTC 180
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ACCGTCGTCGTCACGGAGGAGTGGCACGGGCTGCTGGCCTCCGCCGGTGTGCCCGCCACG 240
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      CTGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCCCAACGTCATCCCCTCCGAGCAC 300
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      GGCCGCGGCGCCGACCCCGCCGGCTTCTTCGAGGCCGTGGACGCCAAGATGGGGGTGGCC 360
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      GTCGAGCAGCTGCTCGACCGGCTGGAGCGGAGGCCCGACGCGATCGTGGCCGACACCTAC 420
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      CTGGCGTGGGGCGTGCCGGCCGGCGCGGCGCGCGGGATCCCGGTGTGCTCGCTGTGGACC 480
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ATGGCGGCCACGTTCTTCTGGGCGCTCTACAACATCCACCTCTGGCCGCCGGTGGATGAC 540
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      CGGGAGGGCGAGCAAGACCTAAGCCGCAAGTCCTTGGAGCAATATGTCCCAGGCTGCTCA 600
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      TCAGTCAGGCTCTCTGACGTCAAGATCTTCCGGTCTTGGGAACGGTCAATGAAGCTGACA 660
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ACGGAGGCGTTCGTCAACGTGCGTAAAGCGCAGTGTGTCCTCTTCACTTCCTTCTACGAG 720
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      CTCGAACCCTGCGCCATGGACAGAATCACGCAGGCGGTTCCGTTCCCGGTGTACCCAGTC 780
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      GGACCTTCAATCTCGGACATGCCGCTGGACGGCGGCGCCGGCAAGATCGACGACGAGGAG 840
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ------------------------------------------------------------
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      CACCGTGCCTGGCTGGACGCGCAGCCGGAGCGCTCCGTGCTGTACGTCTCGTTCGGCAGC 900
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      -------------------------------CGGTTGCTACGACGGTGGGAGCAGAAGAA 29
consensus_11442#3      -------------------------------CGGTTGCTACGACGGTGGGAGCAGAAGAA 29
consensus_11442#0      GTCGTCTCCATGTGGCCGTCGCAGCTGGAGGAGGTCGCCGTGGCGCTGCG---------- 950
consensus_11442#2      --------------------------------GGTCGCCGTGGCGCTGCG---------- 18
                                                       *** **   * ** ** *          

consensus_11442#1      ATGACAAGCCAATTTGTTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTA 89
consensus_11442#3      ATGACAAGCCAATTGGGTCTCCTTTGTTTGCTCTGACCTCCCAATTCACAGCTGGGTCTA 89
consensus_11442#0      -CGACAGCGCGGTCAGGTTCTTCTGGGTGGCCAGGGAC-----AGCGCCAGCGCCGGTGA 1004
consensus_11442#2      -CGACAGCGCGGTCAGGTTCTTTTGGGTGGCCAGGGAC-----AGCGCCAGCGCCGGTGA 72
                         ****   *  *  * *     * * * **   *  *     *    ****   *   *

consensus_11442#1      TGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATA 149
consensus_11442#3      TGTATCACTTATCAAGTACTACAGTGTATCAAAAGCTCTCCAATCTGTGCTGCCTTTATA 149
consensus_11442#0      CCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGT 1064
consensus_11442#2      CCTGCGACGGATCGCCGGCGGCAACGGGTTGGTGGTGCCGTGGTGCGACCAGCTGGGCGT 132
                         *   **  ***     *  **  *  *     *  *     *  *  * **       

consensus_11442#1      TTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGC 209
consensus_11442#3      TTAGTTCCACCAAGAAGACACAAATTCCAGCAGAGATAGTCCGATAGAGATTAGCATGGC 209
consensus_11442#0      GCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTG-CGGGTGGAACTCGCTGC--- 1120
consensus_11442#2      GCTGTGCCACCGCTCCGTCGGCGGCTTCCTCAGCCACTG-CGGGTGGAACTCGCTGC--- 188
                          ** *****     * *      * *  ***  *  * * * * **  *         

consensus_11442#1      GTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAA 269
consensus_11442#3      GTCGACAGCCGTGTCCCGGCACGTGGTCGCGGTGCCGTACCCGGGCCGCGGCCACATCAA 269
consensus_11442#0      -TCGA-GGCCGTGTTC------GCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGA 1172
consensus_11442#2      -TCGA-GGCCGTGTTC------GCCGGCGTGCCGCTGCTCGCGCTCCCCGTCGTCTGGGA 240
                        ****  ******* *      *  * ** *  ** *  * **  ** ** *  *    *

consensus_11442#1      CCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCA--CC 327
consensus_11442#3      CCCGATGCTGGCCGCGTGCCGCCTCCTCGCGGCCGCGGACGGCGAGCTCACCGTCA--CC 327
consensus_11442#0      TCAGGTGGTGGACGC------CCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCT 1226
consensus_11442#2      TCAGGTGGTGGACGC------CCGCGTCGTGGCCGACGAGTGGAGGATCGGCGTCAACCT 294
                        * * ** *** ***      ** * *** *****  **  *   * **  *****  * 

consensus_11442#1      GTCGTCGTCACGGAGG-AGTGGCACG--GGCTGCTG-GCCTCCGCCGGTGTGCCCGCCAC 383
consensus_11442#3      GTCGTCGTCACGGAGG-AGTGGCACG--GGCTGCTG-GCCTCCGCCGGTGTGCCCGCCAC 383
consensus_11442#0      GTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGAT 1286
consensus_11442#2      GTCGGAGCAGAGGAGGGAGGAGGACGACGGCGGCGGCGTCGTCGTCGGCAGGGACGCGAT 354
                       ****  *    ***** **  * ***  *** ** * * *  ** ***   *  *** * 

consensus_11442#1      GC-TGCCGCCGGCGGGCCGCGTCCGCCTCGCCACCATCCTCAACGTC-ATCCACTCCGAG 441
consensus_11442#3      GC-TGCCGCCGGCGGGCCGCGTTCGCCTCGCCACCATCCCCAACGTC-ATTCCCTCCGAG 441
consensus_11442#0      CCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAG 1346
consensus_11442#2      CCGTGCCGCCGCGGCGAGGCTGATGGATCCGGACGACGGCGAGAGCCGAGAGATGAGGAG 414
                        * ********  * *  **    *  **   ** *     *  * * *        ***

consensus_11442#1      CACTGGCGCGGCGCCGACCCCGCCGGCT-CTTCGAGGCCGTGGACGCCAAGATGGG-GGT 499
consensus_11442#3      CACGGCCGCGGCGCCGACCNCGCCGGCTTCTTCGAAGCCGTGGACGCCAAGATGGT-GGT 500
consensus_11442#0      GAGGGCCGCGCTGCTG--CGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGT 1404
consensus_11442#2      GAGGGCCGCGCTGCTG--CGCGAGGCTTGCCGTGGCGCCGTGCAGGACGGACCGGACGGT 472
                        *  * ****  ** *  * **  *  * *   *  ****** * * *     **  ***

consensus_11442#1      G-C-CGTNA-GCAG-CTGCTCACCGGCTGAGCGGAGGCCCGANCGATCGTGGCCACACTT 555
consensus_11442#3      GGC-CGTNT-ACAAATTGTTAAACGGTTGAACGGAGGACCGAATCAATAGAGTCCAACTT 558
consensus_11442#0      GGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGG---AGACTT 1461
consensus_11442#2      GGCTCGTCGCGCCGCTCGTTGAACGGATTCGTGAAAGATCTCGCCGACGGG---AGACTT 529
                       * * ***    *     * * * *** *    * * *  *                ****

consensus_11442#1      ACTTGCT--TGGGCGTGCAGCCGGGCCGCCACGGAATCCGGGTGCTCTTGTGATATGGN- 612
consensus_11442#3      TCCTTCTGTTGGGCGTACGACTAGACAGG-ACCGAATCCATTATCTTATTTTACACAAAC 617
consensus_11442#0      AATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGT- 1520
consensus_11442#2      AATTTCCAGTGAGAGAACAGCGTGAATTAAACCAAAAAAGTAAATAAATGTACTAGCGT- 588
                          * *   ** * *  *  *  *      **  **            * *   *     

consensus_11442#1      --GGCAGTCTTATGGCG-CCTACACATCCACAGTGCCGCGTGATACCGGAGGCACAAACA 669
consensus_11442#3      CGGACGGATATAGGGGGTCTTACAATTCCATGTTCCTATGTAATACATGGTGT-TAAAGA 676
consensus_11442#0      ---GAATGCTTGTTGTGTATCAGTATC-CACG----TGGAGAATAATGGAAG---AGAAA 1569
consensus_11442#2      ---GAATGCTTGTTGTGTATCAGTATCGCACG----TGGAGAATAATGGAAG---AGAAA 638
                                 *   * *    *      **            ***   *  *   * * *

consensus_11442#1      ACCGAAGCCTGACATTTGCCAGCTGCAAAAAGCTTCAACAAATTCCGTTGGACGGAAAAT 729
consensus_11442#3      AT---------------------------------------------------------- 678
consensus_11442#0      ATTTTACTTTAG--GTAATCTGTTGTACGAGGCAAACATCATCCCTGTTCTATCGAAA-C 1626
consensus_11442#2      ATTTTACTTTAG--GTAATCTGTTGTACGAGGCAAACATCATCCCTGTTGTATCGAAA-C 695
                       *                                                           

consensus_11442#1      ACACGGGTTCTATTCTAACATGTTTTATTTTAAATACCACCAGCAAAAAGGGAAGGTGCG 789
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ACTC---TCTTAGATTA-CCAGCCTAAGAGGCTTTTACTTATGGCAGATACCCT------ 1676
consensus_11442#2      ACTC---TCTTAGATTATCCAGCCTTAAAAAAAAGA------------------------ 728
                                                                                   

consensus_11442#1      CGGCATTTTATAGGGGGCGAAAAATTAGGTGACGACTAAAGAGACTAGATTATGCTTAAT 849
consensus_11442#3      ------------------------------------------------------------
consensus_11442#0      ------------------------------------------------------------
consensus_11442#2      ------------------------------------------------------------
                                                                                   

consensus_11442#1      ATGAACTGTTGGTAAGTAGCCACCAAGTGATGTATATGACCTGTATAAATAG 901
consensus_11442#3      ----------------------------------------------------
consensus_11442#0      ----------------------------------------------------
consensus_11442#2      ----------------------------------------------------