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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11506#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 2270 fasta sequence
[TGGACTGAAGGAGTAGAAAACGAGAAGATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA-GGGAGGGGATCCAGAGGAGGACAGGGAGG--AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG-GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG-TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT-GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAATTGCCTACCTCTGAATTTTTATATATATATTTTTTACTTTTGTTAAGATGTTTTGACTCCGTTCATCATAAGTAACTCATAAAATATTATGCAATCCTTTCTTGTCCTTTAAAGCATATTCTTCAACATTTAATGCTGGTATTTGCTCTGTGGGTGTACTCCATTTTATCAAATGCAATAGGTGTGGTGTTCTAAGAGTGGATTTACATTTGTAAACCAAACCTTCATGTTACTGTATTATATTGGTTTTGCCCTGTAATTGGACCAGATATTCCCTACAATCACTCCTAATACTAAATATTTTAAAGAACATACAACGGTTGCAAGCTGTTTTCAGAATTATATCTCTTAGAAGGTTTCCTGGCCACTTCCACCATTAAGATTTGAATTTTTTTTTTCAATTTTTAGTATATTTCATTGGATTTAACCTTCCATGTTGTGGTTAATCAATAGTCTGCCAGGGTTGGTTTTATCATCCTGACTTTGGCAAGGAAGGAATTGACTCTAATTTCGGTTAAGAGTCAGTTAAGTTGAGCAATGAATCAACATTACCCAAGAACCCGGTACAAGTCGGATTGTTCTTTTGCTGGAAGTGTCAGGCGTTAATGTCTGGTGCAAACGTGCAGGTTGTCCGTAGTTAAATTCTTTGGTGCCTGTTTGTGTATCATTAGCAGTATATAGAGTGTACTGGCCTCATTGAACGTGAGAGACCTGTGAAATATGGAACGTTTGTTGTTTACCAGTTGCAAAATTTTGTTGTTTGCCAAGT]
[+] EMBL CF296361 [TGGACTGAAGGAGTAGAAAACGAGAAGATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGG ]
[+] EMBL AK068918 [ ATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAATATTTGCCTACCTCTGAATTTTTATATATATATTTTTTACTTTTGTTAAGATGTTTTGACTCCGTTCATCATAAGTAACTCATAAAATATTATGCAATCCTTTCTTGTCCTTTAAAGCATATTCTTCAACATTTAATGCTGGTATTTGCTCTGTGGGTGTACTCCATTTTATCAAATGCAATAGGTGTGGTGTTCTAAGAGTGGATTTACATTTGTAAACCAAACCTTCATGTTACTGTATTATATTGGTTTTGCCCTGTAATTGGACCAGATATTCCCTACAATCACTCCTAATACTAAATATTTTAAAGAACATACAACGGTTGCAAGCTGTTTTCAGAATTATATCTCTTAGAAGGTTTCCTGGCCACTTCCACCATTAAGATTTGAATTTTTTTTTTCAATTTTTAGTATATTTCATTGGATTTAACCTTCCATGTTGTGGTTAATCAATAGTCTGCCAGGGTTGGTTTTATCATCCTGACTTTGGCAAGGAAGGAATTGACTCTAATTTCGGTTAAGAGTCAGTTAAGTTGAGCAATGAATCAACATTACCCAAGAACCCGGTACAAGTCGGATTGTTCTTTTGCTGGAAGTGTCAGGCGTTAATGTCTGGTGCAAACGTGCAGGTTGTCCGTAGTTAAATTCTTTGGTGCCTGTTTGTGTATCATTAGCAGTATATAGAGTGTACTGGCCTCATTGAACGTGAGAGACCTGTGAAATATGGAACGTTTGTTGTTTACCAGTTGCAAAATTTTGTTGTTTGCCAAGT]
[+] EMBL AK102269 [ ATTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAATGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCCGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTG ]
[+] EMBL AK064338 [ TTTCCATTAACTCCGCCCTCGTGTGTTATCTATCCATCCATCCAGCCATCCGTCTCATCACCCCCACCTCTTCGCTCCGTCGCCTCCTCTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAA GGGAGGGGATCCAGAGGAGGACAGGGAGG AGAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTG GGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGG TGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTAT GGTCCAGTTCGAGAAGTGTGAGCGAGGCCGAGGATGATGATACTGGTGGCCCTGAAGAGGAGAATGGGGTCTTGGATGACTGGGAAGCTGTTGCTGATGCAGATGCGCTTACAGTTGATGATTGTCATTCCCACCAGAGTTCAGGTCATGTGGCGCCACCAGCTGCTCCAAATGTTTGTACAGCTCCTGCCAATCAAACTGGAAGGCAAGATCCCATTCAGAGAACAAAAGCTTGGGCGCCTGATGATATATTCCGTCCACAGAGCTTACCCAGCATCTCCAGGCAGGTCAGCTTCCCAGCAAGCATCGGGAACGGCTGGATGGGTGCTGCACAGCAGGCCAACCTCTCTACGCCTTTGACATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTCGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTG ]
[+] EMBL CF337959 [ CACCTCTTCGCTCCGTCGCCTC CTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCACACCCTCCGCTCCCTCGCCGTCGCTTAGATGTGAGGTCGAAGGGGAGGGGATCCAGAGGAGGACAGGGAGGANAAAGGGGTGCTGCCAGGCAGGAGTTAGGCAGCAGCTATCTGGACTCTCCTGTGCACAGCCCTAGCTCGGACAATTCTGNGGAGCGTTGGCGGCATGCACAGGAAGCATTACAACAATGGTTGGTGGCCTCAATCTCAGCAGCAGCAGCAGTGTATGGGTCCAGTTCGAGAAagt ]
[+] EMBL CF317341 [ CACCTCTTCGCTCCGTCGCCTC CTCTCTCTCTCTCCTCGCCCCGCCGCTTTTTAGGGTTTTTGTTCGCGCCGCCCCGGTGAGAGGTAGACGGGTCTCCCCGGCGAGATGGGCCACGTCGACGCATCGGCCGCCGCCGCCGCCGCGCGCGACGCGAAGAAGAAGAGGGGGAACCGGTCGTCGGCGAAGCTGAAGCAGTGCAAGCTCGACGCGCGCCGCGAGCAGTGGCTTTCGCAAGTCAAGGATGGAAAGGAGGCTAAGGCATCGACTTCGCCGACAGGTACAGAGCCAAATGCTGGGTCCATGACCGTTCCTTCGCCAC ]
[-] EMBL CF337960 [ ATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAA ]
[-] EMBL CF336809 [ ATGTCCAATATGCTGCGAGGATCTTGACCTGACAGACTCAAGCTTCTGTCCTTGTCCTTGTAAATTTTGCCTGTGTCTCTTCTGCCACAACAAGATCCTCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGCATGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAGATGACCTTTGCAGCTACTTATCTACCCATTTATGAGCAATGAAGTACATTGATCTTTGCGTAAAAA ]
[-] EMBL CF296362 [ TCGAAGCTGATGGACGCTGCCCTGGGTGCAGGAAGGAATATGTTGCTGCGCGGCTATCCCGGTCTTGTAGATTGGGTCCAAGATACTAGGTTGTGCCAGGGTTTATAATAGCTCTCTGTCGCAATTTGGTCCTTTGCTGTTGCTGTCAGATATGCGTTTTGTCTTGTGTTGTCCCTTTTTGGTATAAAGAAATGTGAATATTGGATAGGTGCTAAATCCATATAGAACGTCTCCAGAAACTCGGTGTCTGTTTTTAGACTGTTTGCATTGTATGTGATGCGTATGTTGCTGGAGAGGACTCCTTATCGTTTTGTGATATCATATATGATAGCTATATAAAAAGACCTTTGCAGCTAgaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||