cluster # 11568

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Oryza sativa
cluster # 11568 cluster # 11568 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11568#0 length = 2936 sequences # 7

consensus_11568#1 length = 573 sequences # 2

consensusID : consensus_11568#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2936
fasta sequence

                              [ATTCAACGGACAACGGCCCATCAAGTCCATTGCCTCAACCCTAGTCCCCAACTCCGCCCCCACCGCCGCAGGCGCGCCGCCGCCTCGCCGACCCGTCGCCGTCGTCGTCGCCGCCTCGCCACGCCTCATCATACCCCTGTAACATCGCGTCCGCCACCTCGCTCGCGGCCATGGTGGACGCGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCGACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCTACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCAAGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGGACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGAGGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGCTGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTAAAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCCCGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATGGCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACGGGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAATATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCCTTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGTTTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGAAAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTCGTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCTCTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGGAACTGTAATATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGATTTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCCCCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTCCAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCAGCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCATTGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTATACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAGTTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAGAAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCAACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAATGTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTT-AAGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGCGCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATGAGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATAATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACAGCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTCCCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGATTCTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGCACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCAGACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAACATCAGAAT-AATCGGAACACAGTAATGTGGCACAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAGCAGCTAAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCAAGAGTACTCCTCCATTGACATGTGAATTCTTTCGTTTGTTCTTGTGTAAATACCCGAGCGGTGAACATT-GAAGGTAA-AGAAAAGACCAAGCCTGGGGATCATTCTGCAAAAAAAAA]

[+] EMBL AK070364             [ATTCAACGGACAACGGCCCATCAAGTCCATTGCCTCAACCCTAGTCCCCAACTCCGCCCCCACCGCCGCAGGCGCGCCGCCGCCTCGCCGACCCGTCGCCGTCGTCGTCGCCGCCTCGCCACGCCTCATCATACCCCTGTAACATCGCGTCCGCCACCTCGCTCGCGGCCATGGTGGACGCGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCGACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCTACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCAAGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGGACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGAGGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGCTGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTAAAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCCCGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATGGCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACGGGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAATATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCCTTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGTTTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGAAAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTCGTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCTCTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGGAACTGTAATATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGATTTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCCCCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTCCAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCAGCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCATTGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTATACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAGTTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAGAAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCAACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAATGTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTT AAGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGCGCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATGAGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATAATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACAGCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTCCCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGATTCTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGCACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCAGACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAACATCAGAAT AATCGGAACACAGTAATGTGGCACAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAGCAGCTAAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCAAGAGTACTCCTCCATTGACATGTGAATTCTTTCGTTTGTTCTTGTGTAAATACCCGAGCGGTGAACATT GAAGGTAA AGAAAAGACCAAGCCTGGG                    ]
[+] EMBL CB634740             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                           gctttGCCACCGTCGTCGCGAGGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGCTGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTAAAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCTTTATATTCGATGATTGGGGGAGG TTTTTATTGGGGAAGATGATGTAGCGGCCATCAATGGCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACGGGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCTAGGTCCAGGGCAGCGTACCAATATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCCTTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGTTTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU108664             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AAGAACAGCTATCTAGACTATACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAGTTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAGAAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCAACTNTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAATGTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTTAAAGCAGCTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB634741             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATAAGGATTCTTTAATGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGCACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCAGACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAACATCAGAAT AATCGGAACACAGTAATGTGGCACAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAGCAGCTAAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCAAGAGTAGTCCTCCATTGACATGTGAATTCTTTCGTTTGTTCTTGTGTAAATACCCGAGCGGTGAACATT GAAGGTAAGAGAAAAGACCAAGCCTG                      ]
[+] EMBL CA766453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGATGCTTTTCATTCTTCTTCTACTGCCTCAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATCCAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATGGCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGCACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCAGACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCTGGATGTAGAGCAGATCTAACATCAGAAT AATCGGAACACAGTAATGTGGCACAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAGCAGCTAAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCAAGAGTACTCCTCCATTGACATGTGAATTCTTTCGTTTGGTCTTGNGTAAATACCCGAGCGGTGAACATTGGAAGGTAA AGAAAAGACCAAGCCTGGGG                   ]
[-] EMBL CB652275             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACATACAGAAGGGAAGAGCTCTTTCTCTAGAAAACAAACTCATGGGAGGCATTCCCCTCTGGAGGTAGAGCAGATCTAACATTAGAAT AATCGGAACTCAGTAATGTGGCACAACCTGGTCATTTTGTTTGGTTTATAGAAACCTAGGAATGTAGTCATGTTGCATCTCAGCTCTTGAAGCAGCTAAAATTCGGTAGGTTTGTGGTAAGCAGTGACCTAGCTTGAAATTTAGTTTAATCAAGAGTACTCCTCCATTGACAAGTGAATTCTT                                                                                       ]
[+] EMBL AU068375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGAGGCATTCCCCTCTGGATGTAGAGCAGNTCTAACATCAGAATAAANCGGAACACAGTAATGTGGCANAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAGCAGCTNAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCAAGAGTACTCCTCCATTGACATGTGAATTCTTTCGTTTGTTCTTGTGTAAATACCCGAGCGGTGAACATT GAAGGTAA AGAAAAGACCAAGCCTGGGGATCATTCTGCAAAAAAAAA]




>consensus_11568#0
ATTCAACGGACAACGGCCCATCAAGTCCATTGCCTCAACCCTAGTCCCCAACTCCGCCCC
CACCGCCGCAGGCGCGCCGCCGCCTCGCCGACCCGTCGCCGTCGTCGTCGCCGCCTCGCC
ACGCCTCATCATACCCCTGTAACATCGCGTCCGCCACCTCGCTCGCGGCCATGGTGGACG
CGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCG
ACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCT
ACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCA
AGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGG
ACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGA
GGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGC
TGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTA
AAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCC
CGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATG
GCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACG
GGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAAT
ATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCC
TTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGT
TTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGA
AAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTC
GTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCT
CTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGGAACTGTAA
TATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGAT
TTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCC
CCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTC
CAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCA
GCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCAT
TGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTAT
ACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAG
TTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAG
AAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCA
ACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAAT
GTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTTA
AGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGC
GCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATG
AGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATA
ATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACA
GCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTC
CCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGATT
CTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCT
CAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATC
CAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATG
GCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGC
ACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCA
GACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAG
ACATACAGAAGGAAAGAACTCTTTCTCAAGAAAACAAACTCAAGGGAGGCATTCCCCTCT
GGATGTAGAGCAGATCTAACATCAGAATAATCGGAACACAGTAATGTGGCACAAACTGGT
CATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTACATCTCAGATCTTGAAG
CAGCTAAAATTCGGTCGCTTTCTCGTAAGCAGTGACCTAGCTTGAAATTTAGTCTAATCA
AGAGTACTCCTCCATTGACATGTGAATTCTTTCGTTTGTTCTTGTGTAAATACCCGAGCG
GTGAACATTGAAGGTAAAGAAAAGACCAAGCCTGGGGATCATTCTGCAAAAAAAAA

consensusID : consensus_11568#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 573
fasta sequence

                              [GGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACGTACAGAAGGAAATAACTCTTTCCTAAGAGTAACATACTCATAGGGAGGCCACGAGGGCATGCTCTCTGGATGTGAAGCAGCACCTTCATCTAACATCAGAATAATCAGAACCTAATGTGGCACAAGCTGATCATCACATC-TATAGAAA-ATTAGGAATGTAGTCATGTTACATCACAGATCTTGAAGCAGATAACACTTGCAGTCGCTTTCTCGTGAGCCGTGACCTAGCTTGAAATTATAGTCTAATCAAGAGCACTTCTCCGTTCGTTGACATGCGAATTCTTTCGTTTTTTCTTGTGTAAATGCCCGATTAGTGAACCTTGAAGGTAAAGAAAAAAGCAACCTGGGGATCATTCTGCATGTTTTGTCACCTCCCATTACTGTGGTTGTTAGGCATCATAATCGTTGCAGATCCAGAAGATCTTCAGTAATTAGTGATGAAGTAGATGCTTGCACAGCACTGAAGATGAAACATGGAAAACGAAATCTTGGACCGGTAAATATACCTGGCCACTCAATTTCTGTTGAAAAAAAAAA]

[+] EMBL BM039015             [GGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACGTACAGAAGGAAATAACTCTTTCCTAAGAGTAACATACTCATAGGGAGGCCACGAGGGCATGCTCTCTGGATGTGAAGCAGCACCTTCATCTAACATCAGAATAATCAGAACCTAATGTGGCACAAGCTGATCATCACATC TATAGAAA ATTAGGAATGTAGTCATGTTACATCACAGATCTTGAAGCAGATAACACTTGCAGTCGCTTTCTCGTGAGCCGTGACCTAGCTTGAAATTATAGTCTAATCAAGAGCACTTCTCCGTTCGTTGACATGCGAATTCTTTCGTTTTTTCTTGTGTAAATGCCCGATTAGTGAACCTTGAAGG                                                                                                                                                                                                                  ]
[+] EMBL BI812686             [                                                                                                                                                           GCACAAACTGATCATCACATCTTATAGAAATATTAGGAATGTAGTCATGTTACATCACAGATCTTGTAACAGATAACACTTGCACTCGCTTTCTCGTGA CCGTGACCTAGCTTGAAATTATAGTCTAATCAAGAGCACTTCTCCGTTCGTTGACATGCGAATTCTTTCGTTTTTTCTTGTGTAAATGCCCGATTAGTGAACATTGAAGGTAAAGAAAAAAGCAACCTGGGGATCATTCTGCATGTTTTGTCACCTCCCATTACTGTGGTTGTTAGGCATCATAATCGTTGCAGATCCAGAAGATCTTCAGTAATTAGTGATGAAGTAGATGCTTGCACAGCACTGAAGATGAAACATGGAAAACGAAATCTTGGACCGGTAAATATACCTGGCCACTCAATTTCTGTTGAAAAAAAAAA]




>consensus_11568#1
GGTTCAGATGGTGCCATTTCAGGTTTTCATCAGACGTACAGAAGGAAATAACTCTTTCCT
AAGAGTAACATACTCATAGGGAGGCCACGAGGGCATGCTCTCTGGATGTGAAGCAGCACC
TTCATCTAACATCAGAATAATCAGAACCTAATGTGGCACAAGCTGATCATCACATCTATA
GAAAATTAGGAATGTAGTCATGTTACATCACAGATCTTGAAGCAGATAACACTTGCAGTC
GCTTTCTCGTGAGCCGTGACCTAGCTTGAAATTATAGTCTAATCAAGAGCACTTCTCCGT
TCGTTGACATGCGAATTCTTTCGTTTTTTCTTGTGTAAATGCCCGATTAGTGAACCTTGA
AGGTAAAGAAAAAAGCAACCTGGGGATCATTCTGCATGTTTTGTCACCTCCCATTACTGT
GGTTGTTAGGCATCATAATCGTTGCAGATCCAGAAGATCTTCAGTAATTAGTGATGAAGT
AGATGCTTGCACAGCACTGAAGATGAAACATGGAAAACGAAATCTTGGACCGGTAAATAT
ACCTGGCCACTCAATTTCTGTTGAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11568#0      ATTCAACGGACAACGGCCCATCAAGTCCATTGCCTCAACCCTAGTCCCCAACTCCGCCCC 60
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CACCGCCGCAGGCGCGCCGCCGCCTCGCCGACCCGTCGCCGTCGTCGTCGCCGCCTCGCC 120
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACGCCTCATCATACCCCTGTAACATCGCGTCCGCCACCTCGCTCGCGGCCATGGTGGACG 180
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CGGCGGCGGCGGCGGCGGAGTGCGGCGAGCTGGACGGGACGGACGCCATGGCCTACGGCG 240
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACGACCGGACGCCGCGGGACGGGATGGTGTTCAAGTCGTACGAGGAGGTGCTCAACTTCT 300
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACAAGCGCTACGCCCTCCGCACCGGGTTCGGGGTCTGCGTCAAGAAGTCGTCCTTCACCA 360
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AGGCCGGCCTCTGCCGCCGCCTGGTGCTCGTCTGCAACAAGTGGGGGGACGGGAAGGAGG 420
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACGCGTGCTACCAGGCGAGGCCGACGGCCAAGACCAACTGCCAGGCCACCGTCGTCGCGA 480
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GGCTCTGGAGCGATGGCCTGCTGCACCTCATGGATGTCAATCTGGAGCACAACCACGCGC 540
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TGAATCCCTCCGCGGCGCGGTTCCTGAGGTGCTACAAGACGTTGCCTAGTGGGATGAGTA 600
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AAGATCTGGTGGTGAGGGCTGCCAGAGGGGAATGCTCGACCTCCGGCGACATCGAGGTCC 660
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CGATATTCGATGATTGGGGGAGGCTCAAGATTGGGGAAGATGATGTAGCGGCCATCAATG 720
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GCTTTTTCGCGGATATGCAGGCGAAGCAGGCGAACTTCTTCTATCTCATGGATTTCTACG 780
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GGGAAGGCCATCTGAGGAGTGTTTTTTGGGCCGATTCGAGGTCCAGGGCAGCGTACCAAT 840
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ATTTCAACGACGCTGTTTGGATTGATACAACCTGCTTAAGAAATAGGTTTGATACACCCC 900
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TTGTTTTGTTCCTAGGGGTGAACCATCATGGTGAGCTTGTTCTGTTAGGCTGTGGCTTGT 960
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TTTCGGATGAGAGTACGGAAAGCTTCTTATGGCTGCTGAAGTCGTGGTTGACTTGTATGA 1020
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AAGGATGGCCTCCGAATGCCATAGTTACGGATGATTGTGCCGCGATAAAAGCCGCAGTTC 1080
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GTGAAGTATTTCCAAATGCACGCCATCGAATAAGTGATTGGCATGTGTTAAGAAGTATCT 1140
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CTGAAAAGTTAGGAGAATCAGCACAATTTGAAGGAATGAAGACCGAATTGGGAACTGTAA 1200
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TATATGATTCCTTGAAGGATGACGAGTTTGAGGCAAGGTGGAATAACTTGATCAGTAGAT 1260
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TTGGCCTTCAGGATAATGAATGGATCACTTTTCTGTATGAAAATCGCCATTTCTGGGTCC 1320
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CCGCCTTTCTGAAAGATACCTTCTGGGCTGGGTTATCTACTGTTAACCACCATGAGAGTC 1380
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CAAATGCCTTCTTTGAAGATTCAATCAACCCAGAGACCAAATTGGTGACATTCCTTAGCA 1440
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GCTATGTGAATCTTTTACAGAACAAATACAAAATGGAGGAAGATGATGATCTTGAGTCAT 1500
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TGAGTAGAAGCAGGGTGCTAGTATCGAAGTTTCCTATGGAAGAACAGCTATCTAGACTAT 1560
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACACCTTTAAAATGTTCACTAAACTCCAGAATGAGCTGAACGCAACCATGAATTGTGAAG 1620
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      TTCAGTTGGATGATTCAACATCCTCCATTGTAGTTATTGATCTAGCTGAGTCAAGCGGAG 1680
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AAATGGTGAATAAAAAATATGAAGTCGTTCACTGTATGGAGACCGACAGGATGGAATGCA 1740
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACTGTGGCCTGTTCCAGTTCAGTGGCATTGTTTGTCGGCATACATTATCGGTGCTTAAAT 1800
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GTCAGCATGTTTTTGATATACCCCCCTGTTATGTGCTTAACAGGTGGCGGAATGACTTTA 1860
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AGCAGCTTCACGCCTTAGATAATCCATGGAAGGATTTGGTAACAAGTAATCATATTGAGC 1920
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GCTATGATTATGTTTCTTTGCAGTGCCTCCGTCTTGTTGAGATTGGAGCATCATCAGATG 1980
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      AGAAGCATCAGCATGCATTAAAATTAATAAGAGACATACGACGGACCCTTCTTGATGATA 2040
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ATTTGTGCCGGGAATTGGAGCAGAAACTTACACCATCTGAACGTGCTATTAATGGTGACA 2100
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GCCACATGCAAGCTGGCTCATCTGAGGGAGGGCCAGCAAAAAAGCGCCGTGGCCGTCCTC 2160
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CCAAAAAGAGTAAAGATACAAATGTGGAGTCCGTGTCAAATCAATATGCCCATAAGGATT 2220
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CTTTACTGGTATCATCGGACGTTAGTCAGAAGGATGCTTTTCATTCTTCTTCTACTGCCT 2280
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CAAATCTTGGTACTCATGTCAGGACAAATGGTGTTGTTGACCTTATGGAAGAAGTTAATC 2340
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      CAAATGAGCTATCTTTTGATAGCCGTTATGGGGTGCAGTCTAGCCACCCACACCATTATG 2400
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GCAATCAGCTGCATCCAAGCAACACTATGCAGTTTGGCCAAACTACATCAACAGCAGAGC 2460
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      ACTCTAGAGTCCAGTGGATGTACCAGAATATATTTCAGGACGATCAAGTGCCTTATGGCA 2520
consensus_11568#1      ------------------------------------------------------------
                                                                                   

consensus_11568#0      GACGGACATGACAGCAATCAAATACTGGGTTCAGATGGTGCCATTTCAGGTTTTCATCAG 2580
consensus_11568#1      ---------------------------GGTTCAGATGGTGCCATTTCAGGTTTTCATCAG 33
                                                  *********************************

consensus_11568#0      ACATACAGAAGGAAAGAACTCTTTCTCAAGAA-AACAAACTCA-AGGGAGGCAT------ 2632
consensus_11568#1      ACGTACAGAAGGAAATAACTCTTTCCTAAGAGTAACATACTCATAGGGAGGCCACGAGGG 93
                       ** ************ *********  ****  **** ***** ********        

consensus_11568#0      --TCCCCTCTGGATGTAGAGCAG-------ATCTAACATCAGAATAATCGGAACACAGTA 2683
consensus_11568#1      CATGCTCTCTGGATGTGAAGCAGCACCTTCATCTAACATCAGAATAATCAGAACC---TA 150
                         * * **********  *****       ******************* ****    **

consensus_11568#0      ATGTGGCACAAACTGGTCATTTTGTCTCGTCTATAGAAAACTAGGAATGTAGTCATGTTA 2743
consensus_11568#1      ATGTGGCACAAGCTGATCAT-----CACATCTATAGAAAATTAGGAATGTAGTCATGTTA 205
                       *********** *** ****     * * *********** *******************

consensus_11568#0      CATCTCAGATCTTGAAGCAGCTAAAATTCG--GTCGCTTTCTCGTAAGCAGTGACCTAGC 2801
consensus_11568#1      CATCACAGATCTTGAAGCAGATAACACTTGCAGTCGCTTTCTCGTGAGCCGTGACCTAGC 265
                       **** *************** *** * * *  ************* *** **********

consensus_11568#0      TTGAAATT-TAGTCTAATCAAGAGTACTCCTCCATT----GACATGTGAATTCTTTCGTT 2856
consensus_11568#1      TTGAAATTATAGTCTAATCAAGAGCACTTCTCCGTTCGTTGACATGCGAATTCTTTCGTT 325
                       ******** *************** *** **** **    ****** *************

consensus_11568#0      TGTTCTTGTGTAAATACCCGAGCGGTGAACATTGAAGGTAAAGAAAAGACCAAGCCTGGG 2916
consensus_11568#1      TTTTCTTGTGTAAATGCCCGATTAGTGAACCTTGAAGGTAAAGAAAAAAGCAA-CCTGGG 384
                       * ************* *****   ****** **************** * *** ******

consensus_11568#0      GATCATTCTGCAAAAAAAAA---------------------------------------- 2936
consensus_11568#1      GATCATTCTGCATGTTTTGTCACCTCCCATTACTGTGGTTGTTAGGCATCATAATCGTTG 444
                       ************                                                

consensus_11568#0      ------------------------------------------------------------
consensus_11568#1      CAGATCCAGAAGATCTTCAGTAATTAGTGATGAAGTAGATGCTTGCACAGCACTGAAGAT 504
                                                                                   

consensus_11568#0      ------------------------------------------------------------
consensus_11568#1      GAAACATGGAAAACGAAATCTTGGACCGGTAAATATACCTGGCCACTCAATTTCTGTTGA 564
                                                                                   

consensus_11568#0      ---------
consensus_11568#1      AAAAAAAAA 573