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Oryza sativa
cluster # 11583 cluster # 11583       Sequences # 9       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11583#0 length = 3354 sequences # 7  
 consensus_11583#1 length = 422 sequences # 2  
consensusID : consensus_11583#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 3354
fasta sequence 
                              [TCCTCCGCCGCCCGCCCGCCCATTGCCGAGCTCCCCGCCGCACGCCCCAGCTAACTACCACTCCGGCACGGCAGGGCAGGGCAGGGCTCGCCGCCGGAGGGGAATGTGGCATCCTTACCTTCCCCCCTTGCCGTAAAACAAAGAAAGAAAGTCTCCCGTCTCGGCTCCTTGCGCCATCGTCGACAGGGGAGGGGAGGTGGCGAGCAGTAGCAGGGGAGGGGATCCTCCAGGTGGAGGGCAGAAACACCTATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCAGGATTGGCCTCGAGACTCTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGAACAATGCCGGCGACGGTCCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTCCCGCAAACTGCGGGGTCAGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCACCCAGAACAAGGACCCTTTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAGAATGGATTGACAAGATCGAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGGATCCCATTGGTTATATACAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAATCGTATCTCCAGTAAGCGCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTGGTTTCAAGTTCATGACCAGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACACGGTCACTTTCTTCATGAGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCAACAAGGTGTTCGCCAAGAAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGGAGGAATTCTGGCGCGAAATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATGTTGATGGTAGTGCTTTCTCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACTTGAAGAATTTTTCACGGCTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAGGAGTAACAGATCCAATGCTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGGAAGATCATTATTTGTACAGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATGGCATACCGGGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCAC-GGC-TTCAATTGTGGCGAGGCTGTCAACTTTGCTATCAGTGACT-GGTTTCCTCTGGGTTC-TGTGGCCAGCAGAC--GCTACGCGC-TTCTGAACAGAACACCCTTGCTT-GCACACGAGGAGTTACTTTGCCGT-TCTGCAGT-GCTTCTGTCCC-AC-AAACTG-TTAAACAGC-GACCCAAAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAAAAACATACCCGAATCTCTCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGTTGTGTGGATGCAACTTTGACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCCCTTGTAAATCTAACCAGGTTGTCTACGTTAGGGAGGAC-ATACAGGAGCTAGAAGCTCTATCAAGAAAATTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCCGAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGTAAATTTGATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACGTCAACACTGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGTGCTAATCAAGCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCACCTTTAGTCAAAGGAACTGATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATAACGGAACTGGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATATGAAATATTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCAAACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAGCACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTATGAGTATGAAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAGTTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATCCATCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAAGTCCGACCAAAGCGACT-GAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAGCAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCAATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGATAAAGATTTCCTTGTTTAGGTGGGGCTG-TTGACTACACGAAATGATAGGG-CTGGG-ATGGATCGATGAGGTTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAATCGATTCTTTGTGCAG-CAGTGCCTCCAATTT-GAGGCA-CATCTAGGCACGGTTAGAAGAGACAGACAC-ATGACGATT-CTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATGCCTGCACTG-CAAGTGACGTACACACACT-ATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATTTTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTCATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTNATTCAATAGTGAATCATCGTTCTTTCTGGATGGAATNCAAATATGCAATGGTATGGAANGAAAAAAAAAAA]

[+] EMBL AK073475             [TCCTCCGCCGCCCGCCCGCCCATTGCCGAGCTCCCCGCCGCACGCCCCAGCTAACTACCACTCCGGCACGGCAGGGCAGGGCAGGGCTCGCCGCCGGAGGGGAATGTGGCATCCTTACCTTCCCCCCTTGCCGTAAAACAAAGAAAGAAAGTCTCCCGTCTCGGCTCCTTGCGCCATCGTCGACAGGGGAGGGGAGGTGGCGAGCAGTAGCAGGGGAGGGGATCCTCCAGGTGGAGGGCAGAAACACCTATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCAGGATTGGCCTCGAGACTCTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGAACAATGCCGGCGACGGTCCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTCCCGCAAACTGCGGGGTCAGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCACCCAGAACAAGGACCCTTTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAGAATGGATTGACAAGATCGAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGGATCCCATTGGTTATATACAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAATCGTATCTCCAGTAAGCGCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTGGTTTCAAGTTCATGACCAGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACACGGTCACTTTCTTCATGAGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCAACAAGGTGTTCGCCAAGAAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGGAGGAATTCTGGCGCGAAATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATGTTGATGGTAGTGCTTTCTCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACTTGAAGAATTTTTCACGGCTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAGGAGTAACAGATCCAATGCTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGGAAGATCATTATTTGTACAGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATGGCATACCGGGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCAC GGC TTCAATTGTGGCGAGGCTGTCAACTTTGCTATCAGTGACT GGTTTCCTCTGGGTTC TGTGGCCAGCAGAC  GCTACGCGC TTCTGAACAGAACACCCTTGCTT GCACACGAGGAGTTACTTTGCCGT TCTGCAGT GCTTCTGTCCC AC AAACTG TTAAACAGC GACCCAAAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAAAAACATACCCGAATCTCTCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGTTGTGTGGATGCAACTTTGACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCCCTTGTAAATCTAACCAGGTTGTCTACGTTAGGGAGGAC ATACAGGAGCTAGAAGCTCTATCAAGAAAATTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCCGAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGTAAATTTGATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACGTCAACACTGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGTGCTAATCAAGCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCACCTTTAGTCAAAGGAACTGATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATAACGGAACTGGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATCTGAAATATTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCAAACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAGCACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTATGAGTATGAAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAGTTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATCCATCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAAGTCCGACCAAAGCGACT GAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAGCAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCAATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGATAAAGATTTCCTTGTTTAGGTGGGGCTG TTGACTACACGAAATGATAGGG CTGGG ATGGATCGATGAGGTTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAATCGATTCTTTGTGCAG CAGTGCCTCCAATTT GAGGCA CATCTAGGCACGGTTAGAAGAGACAGACAC ATGACGATT CTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATGCCTGCACTG CAAGTGACGTACACACACT ATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATTTTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTCATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATG                                                                             ]
[+] EMBL AU162894             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGGTATGGCATACCGGGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCAC GGC TTCAATTGTGGCGAGGCTGTC ACTTTGCTATCAGTGACTAGGTTTCCTCTGGGTTC TGTGGCCAGCAGACNNGCTACGCNC TTCTGAACAGAACACCCTTGCTTAGCAAACGAGGAGTTACTTTGCCGTATCTGCAGTAGCTTCTGTCCCAACNAAACTGTTTAAACATCNGACCCAAAATCCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS12507A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGTATGGCATACCGGGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTGTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGGGCTTTCAATTGTGGCGAGGCTGTCAACTTTGCTATCAGTGACT GGTTTNCTCTGGGGTCTTTTGGCCA CAAACG GTTACGGGCTTTCTTGACAAGACA CCTTTCTT TCACAGGNGGGGTTACNTTt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB096856             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cagnGGACGAGACAAGGGCTAGAAGCTCTATCAAGAAAATTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCCGAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGCAAATTTGATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACGTCAACACCGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGTGCTAATCAAGCCGACCAATTATACTCCACCACCAAGCAAACCATCAGCTCACCTTTAGTCAAAGGAACTGATGCTGTGGGTGCAAATTCATCCATCATGGCTGATGCTAATAACGGAACTGGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATATGAAATATTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCAAACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAGCACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGCCGTATGAGTATGAAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAGTTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATNCATNCACCAGCTATTCTTTNCGAGGAGAGTTTGNGGGAATGAGTANAGATGCTGCTGCANAANTCCGACCAAAGCGACTGGAAAATCCGGCTACCTTNTTNTANCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CA766565             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   aggggGGAAATTCAGATTCTGAATATGAAATATTTCGAGTNAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCAAACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAGCACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCANGTCGTATGAGTATGAAGAATTTGAATTCATCCTCCTCATGNGGTGAAGAACACNGCCGGATGAAGCGGCGGCAGTTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGNANAAGTCGTACTCGTATCCATCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAAGTCCGACCAAAGCGACT GAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAGCAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCAATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGATAAAGATTTCCTTGTTTAGGTGGGGCTGNTTAACTACACGAAATGATAGGGCCTGGGCATGGATCGATGAGGTTGAATATAAATGNTTAGCACAGAAGCTGA                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU032629             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTG TTGACTACACGAAATGATAGGG CTGGG ATGGATCGATGAGGTTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAATCGATTCTTTGTGCAG CAGTGCCTCCAATTT GAGGCA CATCTAGGCACGGTTAGAAGAGACAGACAC ATGACGATT CTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATNCTTTCNCTG CAAGTGACGTACACACACT ATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATTTTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTCATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTNATTCAATAGTGAATCATCGTTCTTTCTGGATGGAATNCAAATATGCAATGGTATGGAANGAAAAAAAAAAA]
[+] EMBL AU162893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       nTCTTTGTGCAGCCAGTGCCTCCAATTTGGAGGCACCATCTAGGCACGGTTAGAAGAGACAGACACAATGACGATTCCTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATGCCTGCACTGTCAAGTGACGTACACACACTNATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATTTTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTCATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTGATTCAATAGTGAATCATCGTTCTTTCTGGATGGAATGCAAATATGCAATGGTATGGAATGAAAAAAAAAAA]




>consensus_11583#0
TCCTCCGCCGCCCGCCCGCCCATTGCCGAGCTCCCCGCCGCACGCCCCAGCTAACTACCA
CTCCGGCACGGCAGGGCAGGGCAGGGCTCGCCGCCGGAGGGGAATGTGGCATCCTTACCT
TCCCCCCTTGCCGTAAAACAAAGAAAGAAAGTCTCCCGTCTCGGCTCCTTGCGCCATCGT
CGACAGGGGAGGGGAGGTGGCGAGCAGTAGCAGGGGAGGGGATCCTCCAGGTGGAGGGCA
GAAACACCTATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCAGGATTGGC
CTCGAGACTCTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGAACAATGCC
GGCGACGGTCCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTCCCGCAAAC
TGCGGGGTCAGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCACCCAGAAC
AAGGACCCTTTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAGAATGGATT
GACAAGATCGAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGGATCCCATT
GGTTATATACAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAATCGTATCT
CCAGTAAGCGCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTGGTTTCAAG
TTCATGACCAGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACACGGTCACT
TTCTTCATGAGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCAACAAGGTG
TTCGCCAAGAAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGGAGGAATTC
TGGCGCGAAATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATGTTGATGGT
AGTGCTTTCTCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACTTGAAGAAT
TTTTCACGGCTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAGGAGTAACA
GATCCAATGCTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGGAAGATCAT
TATTTGTACAGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATGGCATACCG
GGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATT
TTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTC
CCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGG
GAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGGCTTCAATTGT
GGCGAGGCTGTCAACTTTGCTATCAGTGACTGGTTTCCTCTGGGTTCTGTGGCCAGCAGA
CGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCT
GCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAG
CATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGA
AACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAAAAACATAC
CCGAATCTCTCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGTTGTGTGGA
TGCAACTTTGACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCCCTTGTAAA
TCTAACCAGGTTGTCTACGTTAGGGAGGACATACAGGAGCTAGAAGCTCTATCAAGAAAA
TTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCC
GAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGTAAATTTG
ATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACG
TCAACACTGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGT
GCTAATCAAGCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCACCTTTAGTC
AAAGGAACTGATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATAACGGAACT
GGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATATGAAATA
TTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCA
AACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAG
CACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTATGAGTATG
AAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAG
TTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATCCA
TCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAA
GTCCGACCAAAGCGACTGAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAG
CAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCA
ATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGATAAAGATTT
CCTTGTTTAGGTGGGGCTGTTGACTACACGAAATGATAGGGCTGGGATGGATCGATGAGG
TTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAATCGATTCT
TTGTGCAGCAGTGCCTCCAATTTGAGGCACATCTAGGCACGGTTAGAAGAGACAGACACA
TGACGATTCTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATGCCTGCAC
TGCAAGTGACGTACACACACTATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATT
TTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTC
ATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTNATTCAATAGTGAATCAT
CGTTCTTTCTGGATGGAATNCAAATATGCAATGGTATGGAANGAAAAAAAAAAA

consensusID : consensus_11583#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 422
fasta sequence 
                              [GGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGACGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCTGCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACA]

[+] EMBL CF304863             [GGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGACGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCTGCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACA]
[+] EMBL CF304355             [GGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTCCTCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGNGC ATAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGACGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCTGCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGC                     ]




>consensus_11583#1
GGCTAGCCAGTTTGTATACAACAAGGATATTTTGGTTGGTGAAGGAGAGGATGCAGCATT
TGATGTTCTCTTGGGGAAGACAACAATGTTCCCCCCAAATGTCTTGTTAGACCACAACGT
TCCTGTTTATAAAGCTGTGCAAAAACCTGGGGAGTTTGTCATTACTTTCCCTCGTTCCTA
CCACGCGGGTTTCAGCCACGACGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACAC
GAGGAGTTACTTTGCCGTTCTGCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCA
AAATCCCTCAATAAATCTGAGCATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTG
CAGTTGATGCGATTCCAGAGAAACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATA
CA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11583#0      TCCTCCGCCGCCCGCCCGCCCATTGCCGAGCTCCCCGCCGCACGCCCCAGCTAACTACCA 60
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CTCCGGCACGGCAGGGCAGGGCAGGGCTCGCCGCCGGAGGGGAATGTGGCATCCTTACCT 120
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TCCCCCCTTGCCGTAAAACAAAGAAAGAAAGTCTCCCGTCTCGGCTCCTTGCGCCATCGT 180
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CGACAGGGGAGGGGAGGTGGCGAGCAGTAGCAGGGGAGGGGATCCTCCAGGTGGAGGGCA 240
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GAAACACCTATGCAACAGGTGGAGGGCAGGAACTGTCTTCCTGCGGAGGTCAGGATTGGC 300
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CTCGAGACTCTCAAGAGGCGCCGGCTTGAGAGGATGCGTTTGACTGCTCAGAACAATGCC 360
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GGCGACGGTCCTCCGGTGCCCGCAAGGAGCGGTGGGGATGCGCTAAGGACTCCCGCAAAC 420
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TGCGGGGTCAGGTTGCATGCTAACAATGGCACAGCTCTACCTAGCAGAACCACCCAGAAC 480
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      AAGGACCCTTTTGCAAAGCGCAGGGTGGACAAGTTTGATATGTCTAGCCTAGAATGGATT 540
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GACAAGATCGAAGAATGCCCTGTGTACTATCCTACCAAGGAGGAGTTCGAGGATCCCATT 600
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GGTTATATACAGAAGATTGCACCTGTGGCTTCGAAATACGGAATTTGCAAAATCGTATCT 660
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CCAGTAAGCGCTTCTGTTCCTGCTGGTGTCGTGTTGATGAAGGAACAGCCTGGTTTCAAG 720
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTCATGACCAGGGTTCAGCCGCTTCGCCTCGCCAAATGGGCTGAAGATGACACGGTCACT 780
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTCTTCATGAGCGAAAGAAAGTACACTTTCCGGGATTATGAGAAAATGGCCAACAAGGTG 840
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTCGCCAAGAAATACTCAAGTGCTAGTTGTCTCCCAGCTAAGTACGTGGAGGAGGAATTC 900
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TGGCGCGAAATTGCTTTTGGTAAAATGGATTTTGTTGAATATGCCTGTGATGTTGATGGT 960
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      AGTGCTTTCTCCTCTTCTCCTCATGATCAACTTGGGAAAAGCAACTGGAACTTGAAGAAT 1020
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTTTCACGGCTTTCCAATTCTGTGCTTAGACTTCTGCAGACACCAATTCCAGGAGTAACA 1080
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GATCCAATGCTTTATATCGGGATGCTCTTCAGCATGTTTGCTTGGCATGTGGAAGATCAT 1140
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TATTTGTACAGCATCAATTACCATCATTGTGGGGCATTTAAGACATGGTATGGCATACCG 1200
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GGTGATGCTGCTCCTGGGTTTGAAAAGGTGGCTAGCCAGTTTGTATACAACAAGGATATT 1260
consensus_11583#1      -----------------------------GGCTAGCCAGTTTGTATACAACAAGGATATT 31
                                                    *******************************

consensus_11583#0      TTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTC 1320
consensus_11583#1      TTGGTTGGTGAAGGAGAGGATGCAGCATTTGATGTTCTCTTGGGGAAGACAACAATGTTC 91
                       ************************************************************

consensus_11583#0      CCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGG 1380
consensus_11583#1      CCCCCAAATGTCTTGTTAGACCACAACGTTCCTGTTTATAAAGCTGTGCAAAAACCTGGG 151
                       ************************************************************

consensus_11583#0      GAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACGGCTTCAATTGT 1440
consensus_11583#1      GAGTTTGTCATTACTTTCCCTCGTTCCTACCACGCGGGTTTCAGCCACG----------- 200
                       *************************************************           

consensus_11583#0      GGCGAGGCTGTCAACTTTGCTATCAGTGACTGGTTTCCTCTGGGTTCTGTGGCCAGCAGA 1500
consensus_11583#1      -----------------------------------------------------------A 201
                                                                                  *

consensus_11583#0      CGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCT 1560
consensus_11583#1      CGCTACGCGCTTCTGAACAGAACACCCTTGCTTGCACACGAGGAGTTACTTTGCCGTTCT 261
                       ************************************************************

consensus_11583#0      GCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAG 1620
consensus_11583#1      GCAGTGCTTCTGTCCCACAAACTGTTAAACAGCGACCCAAAATCCCTCAATAAATCTGAG 321
                       ************************************************************

consensus_11583#0      CATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGA 1680
consensus_11583#1      CATCCACATTCACAGCGTTGTTTGAAGTCTTGCTTTGTGCAGTTGATGCGATTCCAGAGA 381
                       ************************************************************

consensus_11583#0      AACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACATTATAAGCCAAAAACATAC 1740
consensus_11583#1      AACACACGTGGCCTACTTGCTAAAATGGGCTCTCAGATACA------------------- 422
                       *****************************************                   

consensus_11583#0      CCGAATCTCTCATGTAGCATGTGTCGGCGTGATTGCTACATTACACATGTGTTGTGTGGA 1800
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TGCAACTTTGACCCAGTCTGTCTTCATCACGAACAAGAACTCCGGAGCTGCCCTTGTAAA 1860
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TCTAACCAGGTTGTCTACGTTAGGGAGGACATACAGGAGCTAGAAGCTCTATCAAGAAAA 1920
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTTGAGAAGGATATTTGCTTGGATAAGGAAATAAGTGGTTTTGACTCATACAAGCAGGCC 1980
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GAAAAGAATGAGCCATTTTTTGAGATAACTCGGAACCTCAGGAACACTGAAGTAAATTTG 2040
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      ATAGAGGATGCCTTCTCAGGAGCAACTGCTGCTGATGCTGCAAAGAGTTCTCCTGCAACG 2100
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TCAACACTGACATCTTTTGCACAACATGATGTGCCTGTTCTTGCTGAAGCAATTGTCTGT 2160
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GCTAATCAAGCCGACCAATTATACTCCACCACCGAGCAAACCATCAGCTCACCTTTAGTC 2220
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      AAAGGAACTGATGCTGTGGGTGCAAATTCATCCAGCATGGCTGATGCTAATAACGGAACT 2280
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GGTTCTTGTAATGCTTCAGCTGTGGAATACAGTGGAAATTCAGATTCTGAATATGAAATA 2340
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTTCGAGTCAAGCGCAGGTCTGGCGTATCAGTAAAGCCTGCATCTGATGCCAAGACATCA 2400
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      AACTTGTCTGATCAACAGGTTCTCAGGCGGTTGAAGAAGGTGCGCCCTGAAATACAACAG 2460
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CACAATAAGCGACCAGAAGACTATGGTCACTGTTCAGTTCCCTCAGGTCGTATGAGTATG 2520
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      AAGAATTTGAATTCATCCTCCTCATGTGGTGAAGAACACTGGAGGATGAAGCGGCGGCAG 2580
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTGGAGACTCAGCAGGATGAGAGCAGTTATTCTGCAAAGCAGAAGTCGTACTCGTATCCA 2640
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TCCACCAGCTATTCTTTCCGAGGAGAGTTTGTGGAAATGAGTAGAGATGCTGCTGCAGAA 2700
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      GTCCGACCAAAGCGACTGAAAATCCGGCTACCTTCTTCTAGCACGAACAGAGTGGTTGAG 2760
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CAGGGCAGTTCAGGGCAAAGATTTACAAGGGATGACAAGTCGCTTGGTTGTTGGCCTGCA 2820
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      ATTTAGAATTTAGAAAAAAATGCTGACGCAGGTGCTAACCTCTGATGGAGATAAAGATTT 2880
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CCTTGTTTAGGTGGGGCTGTTGACTACACGAAATGATAGGGCTGGGATGGATCGATGAGG 2940
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTGAATATAAATGATTAGCACAGAAGCTGACTGACTTTAGAAGGCTGGTTAATCGATTCT 3000
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTGTGCAGCAGTGCCTCCAATTTGAGGCACATCTAGGCACGGTTAGAAGAGACAGACACA 3060
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TGACGATTCTTGTTGCTGGAGGTTCTGGGTCACTGCTTTGCTGCTGTTTGATGCCTGCAC 3120
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TGCAAGTGACGTACACACACTATAGGACCTCGCTCTACCCTTTGATTATATCTCTCTATT 3180
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      TTTCTTCTTCTTTGTCAGCAACCTTAGCTGCTGCTACTCTATAGCTAACTGTATTCTTTC 3240
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      ATACGCTTGTTCCATCAAGTTAATCTGCTGCTTAATGCCATTNATTCAATAGTGAATCAT 3300
consensus_11583#1      ------------------------------------------------------------
                                                                                   

consensus_11583#0      CGTTCTTTCTGGATGGAATNCAAATATGCAATGGTATGGAANGAAAAAAAAAAA 3354
consensus_11583#1      ------------------------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)