cluster # 11618

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Oryza sativa
cluster # 11618 cluster # 11618 Sequences # 9 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11618#0 length = 2246 sequences # 7

consensus_11618#1 length = 797 sequences # 1
consensus_11618#2 length = 329 sequences # 1

consensusID : consensus_11618#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2246
fasta sequence

                              [CTGCATCACCCACCTTCCTCTCCTCTCCTCCCCTCCAACTCCCGATCCCCAAATCTCTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCCAACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCCGCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCGCTCCTCCGCGCCGCGCTCTTCGGCCCCACCACGCCCGACCGGGTGGCGTCGTCGGCGTCCGCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCC-GTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCATAAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTG-TCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCAC-GGCCTCCT-GTTTTTGTTTTTGCTGAGTCAACTT-GGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATATGCTAAGGAAGCTGGAGAATTTCTGGTGCAATGTCCTATTCCAGCTGGTGTTGTTTCTTGCACTGTTGCACTTCTCTGATAGTTCTGGTAGACTAGGCTCAGAATCGAGCCAGTCTTGCTACTATGCGTCTATGCCAACGCGGCAACTTTGTACTGATCTATGTCAACTGTTCATGCAAGATTTATGACGCCAATGTAAAAAA]

[+] EMBL AU181885             [CTGCATCACCCACCTTCCTCTCCTCTCCTCCCCTCCAACTCCCGATCCCCAAATCTCTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCCAACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCCGCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCGCTCCTCCGCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK070642             [                                                     TCTCTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCCAACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCCGCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCGCTCCTCCGCGCCGCGCTCTTCGGCCCCACCACGCCCGACCGGGTGGCGTCGTCGGCGTCCGCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCC GTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCATAAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTG TCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCAC GGCCTCCT GTTTTTGTTTTTGCTGAGTCAACTT GGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATATGCTAAGGAAGCTGGAGAA                                                                                                                                                                                        ]
[+] EMBL CB672375             [                                                                                  ACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATGGAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCGCCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCCAACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCCGCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCGCTCCTCCGCGCCGCGCTCTTCGGCCCCACCACGCCCGACCGGGTGGCGTCGTCGGCGTCCGCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCC GTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTACGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK058595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CACCACGCCCGACCGGGTGGCGTCGTCGGCGTCCGCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCC GTGGGCTCACCCGCCACCGGCAACATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAGATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCATAAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTG TCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCAC GGCCTCCT GTTTTTGTTTTTGCTGAGTCAACTT GGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATATGCTAAGGAAGCTGGAGAA                                                                                                                                                                                        ]
[+] EMBL CB675428             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGGGTGGCGTCGTCGGCGTCCGCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCCTGTGGGCTCACCCGCCACCGGCAACATATTCAGGATCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGGGACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAAGAAGATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTGAACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTACTTATGGAATGCATGCAGCAACAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAATGTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGCAAAGTTCATGTATGGGATGCCACTCGATGTAAGAGAATAAGAACCATGGAAAGCCATCGGATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAAGCAGTCGTGACAAGAGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTACTAGACTTGCTGGGCATAAATCGGAGGACTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTGCTC AAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAAGAACTGCAGATAGATGCATACGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA764180             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGTAATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACTGAGCATACAGCAGCTG TCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCATCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACGGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGGATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGC ATGNACCATTGGTAAGNTCACGGGCCTNCTGGTTTTGGTTTTGGCTGAGTCAACTTGGGAGCTGGGGCTCTTATGTNTACCATGCTAG                                                                                                                                                                                                                                                               ]
[+] EMBL AU166295             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCAC GGCCTCCT GTTTTTGTTTTTGCTGAGTCAACTT GGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATATGCTAAGGAAGCTGGAGAATTTCTGGTGCAATGTCCTATTCCAGCTGGTGTTGTTTCTTGCACTGTTGCACTTCTCTGATAGTTCTGGTAGACTAGGCTCAGAATCGAGCCAGTCTTGCTACTATGCGTCTATGCCAACGCGGCAACTTTGTACTGATCTATGTCAACTGTTCATGCAAGATTTATGACGCCAATGTAAAAAA]




>consensus_11618#0
CTGCATCACCCACCTTCCTCTCCTCTCCTCCCCTCCAACTCCCGATCCCCAAATCTCTCG
CCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATG
GAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCC
GCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCG
CCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCC
AACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCC
GCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCG
CTCCTCCGCGCCGCGCTCTTCGGCCCCACCACGCCCGACCGGGTGGCGTCGTCGGCGTCC
GCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCCGTGGGCTCACCCGCCACCGGCAAC
ATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGG
GACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAG
ATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTG
AACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTAC
TTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAAT
GTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGC
AAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGG
ATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAG
AGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCAT
AAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGT
AATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACT
GAGCATACAGCAGCTGTCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCA
TCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCAC
TTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAAT
GAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACA
ATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCC
CCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTG
TTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTT
GTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAG
TCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTT
GCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAA
TGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTAT
TCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATA
AGTTCACGGCCTCCTGTTTTTGTTTTTGCTGAGTCAACTTGGAGCTGGAGCTCTTATGTA
TACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGA
ATATGCTAAGGAAGCTGGAGAATTTCTGGTGCAATGTCCTATTCCAGCTGGTGTTGTTTC
TTGCACTGTTGCACTTCTCTGATAGTTCTGGTAGACTAGGCTCAGAATCGAGCCAGTCTT
GCTACTATGCGTCTATGCCAACGCGGCAACTTTGTACTGATCTATGTCAACTGTTCATGC
AAGATTTATGACGCCAATGTAAAAAA

consensusID : consensus_11618#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 797
fasta sequence

                              [ATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCACGGCCTCCTGTTTTTGTTTTTGCTGAGTCAACTTGGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATGTGCTAAGGAAGCTGGAGAATTTCTGGTGCAACCTTAAAAGG]

[-] EMBL CB672376             [ATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATAAGTTCACGGCCTCCTGTTTTTGTTTTTGCTGAGTCAACTTGGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGAATGTGCTAAGGAAGCTGGAGAATTTCTGGTGCAACCTTAAAAGG]




>consensus_11618#1
ATACGATTTTGGAATACCACCACGAATATGCACTTAAATTGCGTCGACACAGGCAGTCAG
GTCTGTAATCTTGTATGGTCAAAGAATGTTAATGAGCTTGTTAGCACTCATGGATATTCT
CAAAATCAGATAATTGTTTGGCGATACCCAACAATGTCAAAGCTCGCCACATTGACAGGC
CATACATATAGGGTATTATATTTAGCCATCTCCCCAGATGGACAGACTATAGTAACTGGC
GCTGGTGATGAAACGCTTCGGTTTTGGAACGTGTTTCCATCTCCCAAGTCCCAGAGTTCT
GACAGCCTAAGTAGCATCGGGGCCACATCATTTGTTAGGAGCTACATCCGGTGACACTGA
GATGTGGTAATCTAATAACACTTGGCTCATAAGTCATAACACTACTGCAGCAGAGTGTTG
ATGATCATCAATATCATTCCATTTGTACCACTTGCATCACCAGTTCATGAACCATCAAAC
CTAGCCAAATTTTAGAGATAGTAGGATGCAGAATGGTGAAACTGGCTCGCAGACCTCGGA
GTGGCTCATTTGCTGAATGCTGTATATATTTATTCATTGGCTTTGTAGGAGCGAAGATGG
CAAACACTGACCATCCGCAATGTACCATTGATAAGTTCACGGCCTCCTGTTTTTGTTTTT
GCTGAGTCAACTTGGAGCTGGAGCTCTTATGTATACCATGCTAGGGCTTAACAACATTGG
CCAACTCATGATGCTCATTGCATCCAAGTTGGAATGTGCTAAGGAAGCTGGAGAATTTCT
GGTGCAACCTTAAAAGG

consensusID : consensus_11618#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 329
fasta sequence

                              [TCTNTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGNTCGCCGATGGAGAACTCCGCGTNCTCCAAGCCGCCCACCCNGGNGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGNCGTCCTNCCGCGTCTNCTCCGCGGCGCCGNACCCCTCCNCGTCCTCCTCCGCGNCCACGTCGGCNTNGNGGACGGTNTACAGCGACCGNTTCATNCCCAGCNGAGACGGATNCAANCTAGNGGTNTTNGAANTTGNNCCGTNGGCGTTNCAATANGAAGGATGACGNCGNNGGCGGATTNTNAGGAGNGGAGGGN]

[+] EMBL OSC107081            [TCTNTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGNTCGCCGATGGAGAACTCCGCGTNCTCCAAGCCGCCCACCCNGGNGTCCACCCCGTCGTCGCGCCTCGCCGCCGCGNCGTCCTNCCGCGTCTNCTCCGCGGCGCCGNACCCCTCCNCGTCCTCCTCCGCGNCCACGTCGGCNTNGNGGACGGTNTACAGCGACCGNTTCATNCCCAGCNGAGACGGATNCAANCTAGNGGTNTTNGAANTTGNNCCGTNGGCGTTNCAATANGAAGGATGACGNCGNNGGCGGATTNTNAGGAGNGGAGGGN]




>consensus_11618#2
TCTNTCGCCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGNTC
GCCGATGGAGAACTCCGCGTNCTCCAAGCCGCCCACCCNGGNGTCCACCCCGTCGTCGCG
CCTCGCCGCCGCGNCGTCCTNCCGCGTCTNCTCCGCGGCGCCGNACCCCTCCNCGTCCTC
CTCCGCGNCCACGTCGGCNTNGNGGACGGTNTACAGCGACCGNTTCATNCCCAGCNGAGA
CGGATNCAANCTAGNGGTNTTNGAANTTGNNCCGTNGGCGTTNCAATANGAAGGATGACG
NCGNNGGCGGATTNTNAGGAGNGGAGGGN

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11618#0      CTGCATCACCCACCTTCCTCTCCTCTCCTCCCCTCCAACTCCCGATCCCCAAATCTCTCG 60
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      CCCCCACCCATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGGTCGCCGATG 120
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GAGAACTCCGCGTCCTCCAAGCCGCCCACCCCGGCGTCCACCCCGTCGTCGCGCCTCGCC 180
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GCCGCGCCGTCCTCCCGCGTCTCCTCCGCGGCGCCGCACCCCTCCCCGTCCTCCTCCGCG 240
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      CCCACGCCGGCCTCGCGGACGGTCTACAGCGACCGCTTCATCCCCAGCCGCGCCGGATCC 300
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AACCTCGCGCTCTTCGACCTCGCCCCGTCGCCGTCCCACCACGACGCCGCCGCCGCCGCC 360
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GCCTCCCCCGGCGCGCCGCCCCCCTCCGGATCTACCCCGGCCTCGTCGCCCTACTGCGCG 420
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      CTCCTCCGCGCCGCGCTCTTCGGCCCCACCACGCCCGACCGGGTGGCGTCGTCGGCGTCC 480
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GCGTGCTCCTCCTCCTCCTCCGCCGGGGCGTCGCCCGTGGGCTCACCCGCCACCGGCAAC 540
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      ATATTCAGGTTCAAGGCGGAGGTGCCCCGGAATGCTAAGCGCGCCCTTTTCTCCGACGGG 600
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GACGACGAGGGCGTGCTCTTCCCCGGGGTGTTCACGACGAGGGGCACTGGCCCCAGGAAG 660
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      ATCCCTAGGTCACCTTATAAGGTGCTGGATGCTCCCGCATTGCAGGATGACTTCTACCTG 720
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AACCTTGTGGATTGGTCTTCGCATAATATCCTTGCAGTTGGATTGGGGAATTGTGTCTAC 780
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      TTATGGAATGCATGCAGCAGCAAGGTCACCAAGCTATGTGATTTGGGGGTGGATGACAAT 840
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GTCTGTTCAGTGGGTTGGGCACAGCGTGGCACTCACCTTGCTGTAGGGACAAACCAAGGC 900
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AAAGTTCAGGTATGGGATGCCACTCGTTGTAAGAGAATAAGAACCATGGAAAGCCATCGG 960
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      ATGCGAGTAGGTGCTCTTGCATGGAATTCATCATTGCTTTCGTCAGGCAGTCGTGACAAG 1020
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AGCATCCTTCACCATGATATCCGTGCCCAGGATGATTATATTAGTAGACTTGCTGGGCAT 1080
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AAATCGGAGGTCTGTGGGCTCAAGTGGTCTTATGATAACCGTCAGCTTGCATCTGGTGGT 1140
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AATGACAACAGACTTTATGTATGGAATCAACACTCGGCGCACCCGGTACTGAAGTATACT 1200
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GAGCATACAGCAGCTGTCAAAGCTATTGCGTGGTCACCTCATCTTCATGGGCTGCTTGCA 1260
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      TCTGGTGGAGGAACTGCAGATAGATGCATACGATTTTGGAATACCACCACGAATATGCAC 1320
consensus_11618#1      ---------------------------ATACGATTTTGGAATACCACCACGAATATGCAC 33
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      TTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAAT 1380
consensus_11618#1      TTAAATTGCGTCGACACAGGCAGTCAGGTCTGTAATCTTGTATGGTCAAAGAATGTTAAT 93
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACA 1440
consensus_11618#1      GAGCTTGTTAGCACTCATGGATATTCTCAAAATCAGATAATTGTTTGGCGATACCCAACA 153
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      ATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCC 1500
consensus_11618#1      ATGTCAAAGCTCGCCACATTGACAGGCCATACATATAGGGTATTATATTTAGCCATCTCC 213
consensus_11618#2      ---------------------------------------------TCTNTCGCCCCCACC 15
                                                                    * * * ***  * **

consensus_11618#0      CCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTG 1560
consensus_11618#1      CCAGATGGACAGACTATAGTAACTGGCGCTGGTGATGAAACGCTTCGGTTTTGGAACGTG 273
consensus_11618#2      CATGGATCACCACCACCACCACCTGCCGCCGCCGCCGCCGCGNT-CGCCGATGGAGAAC- 73
                       *  *    **   *   *  * *** *** *  *  *   ** * **    ****     

consensus_11618#0      TTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTT 1620
consensus_11618#1      TTTCCATCTCCCAAGTCCCAGAGTTCTGACAGCCTAAGTAGCATCGGGGCCACATCATTT 333
consensus_11618#2      TCCGCGTNCTCCAAGCCGCCCA--CCCNGGNGTCCACCCCGTCGTCGCGCCTCGCCGCC- 130
                       *   * *   ***** * *  *   *     * * *    *     * *** *  *    

consensus_11618#0      GTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAG 1680
consensus_11618#1      GTTAGGAGCTACATCCGGTGACACTGAGATGTGGTAATCTAATAACACTTGGCTCATAAG 393
consensus_11618#2      GCGNCGTCCTNC-CGCGTCTNCTCCGCGGCGCCGNACCCCT----CCNCGTCCTCCTCCG 185
                       *    *  ** *   **    * * * *  *  * *  *      *      *** *  *

consensus_11618#0      TCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTT 1740
consensus_11618#1      TCATAACACTACTGCAGCAGAGTGTTGATGATCATCAATATCATTCCATTTGTACCACTT 453
consensus_11618#2      CGNCCACGTCGGCNTNGNGGACGGTNTACAGCGACCGNT-TCATNCC-----CAGCNGAG 239
                            **         *  **  **  *     * *  * **** **      * *    

consensus_11618#0      GCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAA 1800
consensus_11618#1      GCATCACCAGTTCATGAACCATCAAACCTAGCCAAATTTTAGAGATAGTAGGATGCAGAA 513
consensus_11618#2      ACGGATNCAANCTAGNGGTNTTNGAANTTGNNCCG-TNGGCGTTNCAATANGAAGGATGA 298
                        *     **    *       *  **  *   *   *    *    * ** ** * *  *

consensus_11618#0      TGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTAT 1860
consensus_11618#1      TGGTGAAACTGGCTCGCAGACCTCGGAGTGGCTCATTTGCTGAATGCTGTATATATTTAT 573
consensus_11618#2      CGNCGNNGGCGGATTNTNAGGAGNGGAGGGN----------------------------- 329
                        *  *     ** *          **** *                              

consensus_11618#0      TCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATA 1920
consensus_11618#1      TCATTGGCTTTGTAGGAGCGAAGATGGCAAACACTGACCATCCGCAATGTACCATTGATA 633
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AGTTCACGGCCTCCTGTTTTTGTTTTTGCTGAGTCAACTTGGAGCTGGAGCTCTTATGTA 1980
consensus_11618#1      AGTTCACGGCCTCCTGTTTTTGTTTTTGCTGAGTCAACTTGGAGCTGGAGCTCTTATGTA 693
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      TACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGA 2040
consensus_11618#1      TACCATGCTAGGGCTTAACAACATTGGCCAACTCATGATGCTCATTGCATCCAAGTTGGA 753
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      ATATGCTAAGGAAGCTGGAGAATTTCTGGTGCAATGTCCTATTCCAGCTGGTGTTGTTTC 2100
consensus_11618#1      ATGTGCTAAGGAAGCTGGAGAATTTCTGGTGCAACCTTAAAAGG---------------- 797
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      TTGCACTGTTGCACTTCTCTGATAGTTCTGGTAGACTAGGCTCAGAATCGAGCCAGTCTT 2160
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      GCTACTATGCGTCTATGCCAACGCGGCAACTTTGTACTGATCTATGTCAACTGTTCATGC 2220
consensus_11618#1      ------------------------------------------------------------
consensus_11618#2      ------------------------------------------------------------
                                                                                   

consensus_11618#0      AAGATTTATGACGCCAATGTAAAAAA 2246
consensus_11618#1      --------------------------
consensus_11618#2      --------------------------