cluster # 11672

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Oryza sativa
cluster # 11672 cluster # 11672 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11672#0 length = 1505 sequences # 5

consensus_11672#1 length = 1469 sequences # 4

consensusID : consensus_11672#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1505
fasta sequence

                              [CACCTCACCGCCGCTGCGTCCCGACTCCCAACGATGGCGCCGCCTCCGCCGCCGACGCGATGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCCGCCGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGCGGCTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATGGGCTGCGAGATGTCGTACGGGTTCCTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGGTGCTCGCCTACGGCTTCCTCATGTTCAAGTCCGCCACCTACCTCTCCTCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGGGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTA-CTGGTGGTGGCTTCACCGATAATATC-CCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTG-TAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCC-AACGGCAGAACCTATTATTTGGACTTGCA-T-CTACGAGAGGTGTCATCTTATTAAAAAAAAAA]

[+] EMBL AK102151             [CACCTCACCGCCGCTGCGTCCCGACTCCCAACGATGGCGCCGCCTCCGCCGCCGACGCGATGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCCGCCGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGCGGCTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATGGGCTGCGAGATGTCGTACGGGTTCCTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGGTGCTCGCCTACGGCTTCCTCATGTTCAAGTCCGCCACCTACCTCTCCTCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGGGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTA CTGGTGGTGGCTTCACCGATAATATC CCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTG TAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAGCATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTGGACTTGCA T CTACGAGAGGTGTCATCTTATTAAA       ]
[-] EMBL CB655858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AAAAATATCATGGAGGGAGATATCATCATTGGTTTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTA CTGGTGGTGGCTTCACCGATAATATC CCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTG TAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTGGACTTGCA T CTACGAGAGGTGT                   ]
[+] EMBL BI798152             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gtTGTAAAAGGAATACCCCATATTA CTGGTGGT GCTTCACCGATAATATC CCAAGAGTATTTCCTTCTGGACTTGGGCCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAA CAAAGAA CAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGA GTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGCTAATCGCATAACAT AATGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCC AAC GCAGAACCTATTATTTGGACTTGCACT CTACGAGAGGTGTCATCTTATTACAAAAAA  ]
[+] EMBL BI798425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AAAAGGTATAGCCCATATGAGCT GTGGT GCTTCACCGATAATATCGCCAAGAGTATGTCC TCTGGACTTGGGCCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGC AAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTG TAATCGCATAACATAATGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAAC TGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCC AACGGCAGAACCTATTATTTGGACTTGCA TCCTACGAGAGGTGTCATCTTATTACCAAAAAAA]
[+] EMBL BI811559             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGGAAGT CCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGC AAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTG TAATCGCATAACATAATGGGGGCCAAGTCCTGGAGC ACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCC AACGGCAGAACCTATTATTTGGACTTGCA T CTACGAGAGGTGTCATCTTATTAAAAA     ]




>consensus_11672#0
CACCTCACCGCCGCTGCGTCCCGACTCCCAACGATGGCGCCGCCTCCGCCGCCGACGCGA
TGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCCGC
CGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGCGG
CTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATGGGCTGCGAGATGTCGTACGGGTTC
CTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGGTGCTCGCCTACGGCTTCCTC
ATGTTCAAGTCCGCCACCTACCTCTCCTCCGCATCGGCAGGTTGGCTCCAGCGATAGGCG
GCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCGATGGAGTCG
GGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGATTGATCTGG
TGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACT
ACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCG
ATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATT
TCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGGGGGTGCTGTTAAGAAGGATA
AGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTG
GGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGT
TGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGG
CACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAG
GAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTG
GACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTC
AAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAA
TGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGA
ACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTA
ATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCA
GCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTT
AGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCC
CCCAACGGCAGAACCTATTATTTGGACTTGCATCTACGAGAGGTGTCATCTTATTAAAAA
AAAAA

consensusID : consensus_11672#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1469
fasta sequence

                              [CTCGCGTCCCATCTCTCCCTCTCTCCTCCCACCCATGGCCGCCGCCGCCGACCGCCTCCTCCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCCCCCGCCGCCGTCCCGTCGTCCCGCACCCGAGCCACCTTCTACCACCAGCCGCGGAGCCTCCGCCTGGCGGCAGGGGCATCCGGTATGCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGG-GCGCGGGCGGGAGCGGGGTCGAGGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGCGTGGATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTG-TTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGAC-ACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTGGACTTGCATCTAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101211             [CTCGCGTCCCATCTCTCCCTCTCTCCTCCCACCCATGGCCGCCGCCGCCGACCGCCTCCTCCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCCCCCGCCGCCGTCCCGTCGTCCCGCACCCGAGCCACCTTCTACCACCAGCCGCGGAGCCTCCGCCTGGCGGCAGGGGCATCCGGTATGCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGG GCGCGGGCGGGAGCGGGGTCGAGGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGCGTGGATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTG TTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGAC ACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTGG                            ]
[+] EMBL AU108708             [                                          CGCCGCCGACCGCCTCCTCCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCCCCCGCCGCCGTCCCGTCGTCCCGCACCCGAGCCACCTTCTACCACCAGCCGCGGAGCCTCCGCCTGGCGGCAGGGGCATCCGGTATGCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGGNGCGCGGGCGGGAGCGGGGTCGAGGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGNGTNGATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGNTTCGGTGGGNTCTTTCCCTTCGGTGACCAATTTCTTGTTTGCTGGAACCGATGGAGTNGGGACGAAGCTCAAGNTTGCGTTTGAAANTGGTATCCATGACAAAAATTGGGATTGATCTNGTGGCTATAAGTGTTAATNACATTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB655857             [                                                                                                                                                                                                                                           GGGCGATGAGGAGGGGATGACGTACAAGGGCGCCGGCGTGGATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTG TTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGAC ACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C96917               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTGNACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATACCTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGNTGGTGTAAANGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCA TACGTCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTGGACTTGCATCTAAAAAAAAAAAAAAAAAA]




>consensus_11672#1
CTCGCGTCCCATCTCTCCCTCTCTCCTCCCACCCATGGCCGCCGCCGCCGACCGCCTCCT
CCACCTCCTCCGCGCCGCGCCTGCTTCCCCGGCCCCCGCCGCCGTCCCGTCGTCCCGCAC
CCGAGCCACCTTCTACCACCAGCCGCGGAGCCTCCGCCTGGCGGCAGGGGCATCCGGTAT
GCGCCGCGTTGCCGTGGCCTGCAGCTCCGCGGGCGCGGGCGGGAGCGGGGTCGAGGGCGA
TGAGGAGGGGATGACGTACAAGGGCGCCGGCGTGGATATCGACGCCGGGACGGAGCTCGT
CCGCCGCATCGGCAGGTTGGCTCCAGCGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGG
TGACCAATTTCTTGTTGCTGGAACCGATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGA
AACTGGTATCCATGACACAATTGGGATTGATCTGGTGGCTATGAGTGTTAATGACATTGT
GACTTCGGGTGCAAAACCACTGTTCTTCCTAGACTACTATGCTACGAGCAAGCTCGACGT
TGATCTAGCAGAGAAGGTTATCAAGGGGATTGTCGATGGATGCCGGCAATCAGATTGTGC
TCTGCTAGGAGGAGAGACAGCAGAAATGCCTGATTTCTATAAAGAAGGTGAATATGATCT
AAGTGGCTTTGCTGTGGGTGCTGTTAAGAAGGATAAGGTCATCGATGGTAAAAATATCAT
GGAGGGAGATATCATCATTGGTCTTCCTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCT
TGCTAGAAGAGTACTGGAGAAAAGTGGACTTTCGTTGAATGACCAGCTCCCCAGAAATGA
TGGCATGATAACTACTGTTGGTGAAGCTCTCATGGCACCAACTGTTATCTATGTTAAGCA
GGTGCTCGAGATTATTAACAAGGGTGGTGTAAAAGGAATAGCCCATATTACTGGTGGTGG
CTTCACCGATAATATCCCAAGAGTATTTCCTTCTGGACTTGGGGCAAAGATTTTTACTGC
AGCATGGGAAGTGCCACCTGTATTCAGGTGGATTCAAGAGGTTGGAAAAATTGAAGATGC
AGAGATGAGGCGCACGTTCAACATGGGAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGC
AGCTGATGGAATTCTCGAAGGTACCCATGGACCGAACCACGCATATCGCATTGGAGAGGT
GATCAGTGGTGAAGGAGTCCACTACGTCTGATCTAATTAATGATCTTTATAATGCTTTGA
GTAGTTTGAGGTTTGTTCATCCGACAGGCAAACCAGCCTAATTTTTGTAATCGCATAACA
TAAAGGGGGCCAAGTCCTGGAGCAACAGTGAGTTTAGTCCTGTAAGATAAGAAAACATGG
GGCGTACTCCTTTTAGTTCCACATGAGAACTTGCCCCCAAACGGCAGAACCTATTATTTG
GACTTGCATCTAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11672#0      --CACCTCACCGCCGCTGCGTCCCGACTCCCAACGATGGCGCCGCCTCCGCCGCCGACGC 58
consensus_11672#1      CTCGCGTC-CCATCTCTCCCTCTCTCCTCCCACCCATG-----GCCGCCGCCGCCGAC-- 52
                         * * ** **  * ** * ** *  ****** * ***     *** ***********  

consensus_11672#0      GATGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCC 118
consensus_11672#1      ----------CG-CCTCCTCCACCTCCTCCGCGCCGC-GCCTGCTTCCCCGGCCCCCGCC 100
                                 ** ******** ******** ** **  **     *** **  *   ***

consensus_11672#0      GCCGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGC 178
consensus_11672#1      GCCGTCCCGTCGTCCCGCACCCGAGCCACCTT----CTACCACCAGC-----CGCGGAGC 151
                       **** *** ** *  *  **    ** **  *    *** * * * *     ** *  **

consensus_11672#0      GGCTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATGGGCTGCGAGATGTCGTACGGGT 238
consensus_11672#1      CTCCGCC--TGGCGGCAGGGGCATCCGGTATGCGC-CGCGTTGCCG--TGGCCTGCAGCT 206
                         * ***   ****** * ***  * **   *  *  * * ***    ** * * * * *

consensus_11672#0      TC-CTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGG--TGCTCGCCTACGGCT 295
consensus_11672#1      CCGCGGGCGCGGGCGGGAGCGGGGTCGAGGGCGATGAGGAGGGGATGACGTACAAGGGCG 266
                        * * * ** *  **    *** ** * **    **     **  **     * * *** 

consensus_11672#0      TCCTCATGT---TCAAGTCCGCCACCTACCTC-TCCTCCGCATCGGCAGGTTGGCTCCAG 351
consensus_11672#1      CCGGCGTGGATATCGACGCCGGGACGGAGCTCGTCCGCCGCATCGGCAGGTTGGCTCCAG 326
                        *  * **    ** *  ***  **  * *** *** ***********************

consensus_11672#0      CGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCG 411
consensus_11672#1      CGATAGGCGGCTTCGGTGGCCTCTTCCCCTTCGGTGACCAATTTCTTGTTGCTGGAACCG 386
                       ************************************************************

consensus_11672#0      ATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGA 471
consensus_11672#1      ATGGAGTCGGGACGAAGCTCAAGCTTGCGTTTGAAACTGGTATCCATGACACAATTGGGA 446
                       ************************************************************

consensus_11672#0      TTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCT 531
consensus_11672#1      TTGATCTGGTGGCTATGAGTGTTAATGACATTGTGACTTCGGGTGCAAAACCACTGTTCT 506
                       ************************************************************

consensus_11672#0      TCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGG 591
consensus_11672#1      TCCTAGACTACTATGCTACGAGCAAGCTCGACGTTGATCTAGCAGAGAAGGTTATCAAGG 566
                       ************************************************************

consensus_11672#0      GGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAA 651
consensus_11672#1      GGATTGTCGATGGATGCCGGCAATCAGATTGTGCTCTGCTAGGAGGAGAGACAGCAGAAA 626
                       ************************************************************

consensus_11672#0      TGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGGGGGTGCTGTTA 711
consensus_11672#1      TGCCTGATTTCTATAAAGAAGGTGAATATGATCTAAGTGGCTTTGCTGTGGGTGCTGTTA 686
                       ************************************************ ***********

consensus_11672#0      AGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTC 771
consensus_11672#1      AGAAGGATAAGGTCATCGATGGTAAAAATATCATGGAGGGAGATATCATCATTGGTCTTC 746
                       ************************************************************

consensus_11672#0      CTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTG 831
consensus_11672#1      CTTCTAGTGGGGTTCATTCTAACGGGTTCTCCCTTGCTAGAAGAGTACTGGAGAAAAGTG 806
                       ************************************************************

consensus_11672#0      GACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAG 891
consensus_11672#1      GACTTTCGTTGAATGACCAGCTCCCCAGAAATGATGGCATGATAACTACTGTTGGTGAAG 866
                       ************************************************************

consensus_11672#0      CTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTG 951
consensus_11672#1      CTCTCATGGCACCAACTGTTATCTATGTTAAGCAGGTGCTCGAGATTATTAACAAGGGTG 926
                       ************************************************************

consensus_11672#0      GTGTAAAAGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTAT 1011
consensus_11672#1      GTGTAAAAGGAATAGCCCATATTACTGGTGGTGGCTTCACCGATAATATCCCAAGAGTAT 986
                       ************************************************************

consensus_11672#0      TTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCA 1071
consensus_11672#1      TTCCTTCTGGACTTGGGGCAAAGATTTTTACTGCAGCATGGGAAGTGCCACCTGTATTCA 1046
                       ************************************************************

consensus_11672#0      GGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGG 1131
consensus_11672#1      GGTGGATTCAAGAGGTTGGAAAAATTGAAGATGCAGAGATGAGGCGCACGTTCAACATGG 1106
                       ************************************************************

consensus_11672#0      GAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCC 1191
consensus_11672#1      GAATTGGAATGGTCCTTGTGGTAAGCAAAGAAGCAGCTGATGGAATTCTCGAAGGTACCC 1166
                       ************************************************************

consensus_11672#0      ATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACG 1251
consensus_11672#1      ATGGACCGAACCACGCATATCGCATTGGAGAGGTGATCAGTGGTGAAGGAGTCCACTACG 1226
                       ************************************************************

consensus_11672#0      TCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACA 1311
consensus_11672#1      TCTGATCTAATTAATGATCTTTATAATGCTTTGAGTAGTTTGAGGTTTGTTCATCCGACA 1286
                       ************************************************************

consensus_11672#0      GGCAAACCAGCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAAC 1371
consensus_11672#1      GGCAAACCAGCCTAATTTTTGTAATCGCATAACATAAAGGGGGCCAAGTCCTGGAGCAAC 1346
                       ************************************************************

consensus_11672#0      AGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGA 1431
consensus_11672#1      AGTGAGTTTAGTCCTGTAAGATAAGAAAACATGGGGCGTACTCCTTTTAGTTCCACATGA 1406
                       ************************************************************

consensus_11672#0      GAACTTGCCCCCAA-CGGCAGAACCTATTATTTGGACTTGCATCTACGAGAGGTGTCATC 1490
consensus_11672#1      GAACTTGCCCCCAAACGGCAGAACCTATTATTTGGACTTGCATCTAAAAAAAA------- 1459
                       ************** *******************************  * *         

consensus_11672#0      TTATTAAAAAAAAAA 1505
consensus_11672#1      -----AAAAAAAAAA 1469
                            **********