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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11699#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3066 fasta sequence
[CAGTAGGAGGTCACTGCACTAGCCCACATGCCGCTGCAGTAGCTAGTCGTCGTAGCAGCAGCAGTATACTACTAGTAGTAGCCTTCTTGGCCTTCTTCTTCTTCTTCTTGCACAGATCTTGGGGGCGCAATCAGCCAGTTGCAGGCTTGCAGCAGACGAACCTCGGAGAGAGAGGCCTGCGTTCTTGCGAAAGAGGAGCTAGAGCTTCAGGATAAAGCAGACACCAATTCCTCAAGGAAACAAGTTCTTAAATTGACACCTCCTTCATAAACTATTTTATAAAGATTCAAAGATAATAGAATAGAGAAAATGCATCAAGACAGTTTCAGGTCGGTGGTTTGCAGATCCCTTTCAAAGAGTCTTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAAAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGGATACCAAGTCTAAAACAGGATCAGCATCTCGGTCTAGTGCTAATACAGTGAAAAGGCCTGATAAGAAATCAATGATTGCATCAAGTAGCAGCTCTTCAACATGTCGCACAAGGAAGCCGGTCGCACGTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTTCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACACACTTAGTATCAAAAAATGAAGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA-CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAATTTCGATGAATGAACAATGCCGAGGAATCGCAAATAGCAATGAGCAAGGACAGTTCTTGTTTTCATTTCTTTTTTTTTTAAAAAAAAGCTAGTTGAATACCCGTATGTTATAAAGGGTCACGCTCATATAATTAGGGACGGATTAGACGGGTGATTGATGATACAATATTGGATCTGGTGGTTACTTTTTACAAACGAGAACACACGTACATTGAGAGGAGGAAATAAAAGGAGAAGGGCCCCATTTTTAAAGTAGTAACTAGCATTGAGAGTAGGAAATAAAATGAGGACAGTTGTGTTTGCTAGGGGAGGATGGGAAAATGCACACTACGCTCGGAAGGCGAAGTAGTCTATTAGCGTCTATTAGCGCGTGATTAATTAAGTATTAGTTATTTTTTTAAAAAAAAATTGGGGCAATA]
[+] EMBL AK065657 [CAGTAGGAGGTCACTGCACTAGCCCACATGCCGCTGCAGTAGCTAGTCGTCGTAGCAGCAGCAGTATACTACTAGTAGTAGCCTTCTTGGCCTTCTTCTTCTTCTTCTTGCACAGATCTTGGGGGCGCAATCAGCCAGTTGCAGGCTTGCAGCAGACGAACCTCGGAGAGAGAGGCCTGCGTTCTTGCGAAAGAGGAGCTAGAGCTTCAGGATAAAGCAGACACCAATTCCTCAAGGAAACAAGTTCTTAAATTGACACCTCCTTCATAAACTATTTTATAAAGATTCAAAGATAATAGAATAGAGAAAATGCATCAAGACAGTTTCAGGTCGGTGGTTTGCAGATCCCTTTCAAAGAGTCTTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAAAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGGATACCAAGTCTAAAACAGGATCAGCATCTCGGTCTAGTGCTAATACAGTGAAAAGGCCTGATAAGAAATCAATGATTGCATCAAGTAGCAGCTCTTCAACATGTCGCACAAGGAAGCCGGTCGCACGTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTTCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACACACTTAGTATCAAAAAATGAAGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGGCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTAGCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAAT ]
[+] EMBL CB620576 [ TTTCCTCCAAAACCAAAGAGAGCAGCTACCCTGAAATAGCTCAATGTGCTGTCCCTTGTGTTGTCACATTGCAACCTACGGTTTGTCGAGGCTGCCAAGGCCGGGATTGGAGCCCATCACAAAGCAACAGGGAGGATATGTCCATGATGTTGCAGAAAGATTACCTGATGGCATCCTCGCTCTCGAGGCGCTTCGCGGAGGACCTCCTAAGAGGAGCCATGGACCTCCAGGATTCGCTCACGATGCTCGAGAAGTTCCAAACTGCGTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCCAAATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGA ]
[+] EMBL CB629761 [ AACCGTTTCGCGGAGCATGAGAGTGTCAAACAAGAAGAGAAGGCCAGAGGGTTGTGAGAGATCACCGGACACAAGTGGATTCCGTGGAGCCCTGTCGGAAGCGTCAAACGCCAAGAAGATGGTGGGTAGAAGCGCCAGCAGTGGATTGGATGGGGAATTAACGAATTCTACTGATGAGCTGAAAAGAGTGATCAAGGATAGCTTTTACAGGAAGAACATCTTGTCGGTATATCCCAATGATGAACAGGCTTCCATGAGCCAGTCATTACATTACATGCCAAACAAGAATTCGTTATCCAAGCCTAATGAGCAGAAGAAGGCAGCACCAAGATCATTGCCATCTTGTGCACCAGGGCAGTCTGAGAAGTCC ATCCCCAAGCTTGGTAGCAAAGCTCATGGGCCTTGATGGATTGCCTACACACAATAGCAATACCTTCAAAAAAGACGAGTCAATGAAGACAGTAAGTTCACCAAGGGCACTTTTTGATATTGAGATGCCTAAGGTCCAGCAAAATGATGCTCATATGAGTTCTCCTTATTCCCGAAAAAGTAATGTTTCTCTGTATGATTCTACTGTGGTTAATGAGATTGGCTCAATGAAAACAATTAGGAGGGAAAAAGGCATAGAGCAACCTCAAACCCGAGCAGCCAAGGATATCAAGGTTGTATCTCACACAAGTCGAAAGCAACAAATAAAAGAGACCACTGAAATGGGCAGGAGAAGTAGTGACAAACAAAGACCTCATTCGACTTATAGGAACAGAGAAGGGAGGAAGG ]
[+] EMBL AK058920 [ GTAAAGCACCTAGTAATTCGAGGGAGAAGGCAGTGTCCAGTAGAAGTCGCAAGAACTCAACTATTGATGACATTGTGGCATATGAGCTGCACAGAGAGTTCATACAAGTTGATGGTCCATCCACTGAACATAGCGCAACACCTAGTGATGAAAGCTGCCAAAGTGTTGTTGATTGGGACACAGAGCCTAGCATTGATGGCATTCGGGAAGATTTGAGTGAATCCTATGAAGCTCCAGTGACTACCAGCTCTGCGGAAAGAACCGATTCAGCTAACGGAGATCCTTTTCACCCATCGACAC ]
[-] EMBL CB620577 [ AGTTGAAATAAAAGACGAGATGAGTCTGCTTCTCCTAAGTGATCAACCATTCCTTACCCGGGCAGCAGAACTCATTGGCATCGGCGAACCGGGGCATCTGATCAACCGATATAAAGGTATCCGCAAGGCCCAGATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATGTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGTTATAAGGGCATGATGAATAGACAAAG ]
[-] EMBL CA760128 [ TAAAGGTATCCGCAAGGCCCAGATGGGTACCCATGAGCTTTTCGTGGACACCGCANCAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTNGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAAT ]
[-] EMBL CA760127 [ GATGGGTAACCATGAGCTTTTCGTGGACACCGCAACAGAGCAGCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCACCCAT CTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATTTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAAAGCA TTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCAAAAAAAAA ]
[-] EMBL CB637470 [ GCTGGAGCGGAAGCATCGTCAGCGAAACAGCTTGTGTTACACAGGAATTTGGAGCCAGAAATGCAGAACAGCA CCATACTTCTCACTGGAGGCATTGCTGACAGATATTCGCGATGCGACTCGAAAGCTGAGCATCTATACCGAAGACGACGATGGCTGCACTACAAAAGACACACTATACATGAAACTGGAGAAGGATCTGAGATGCACAGATGCGTCGATCAACAGCGTGTGGGATATGGGCTGGGAAGATTGGATTTTCATGGAGGAAACACAATGCTTCATAAGAGATGTTGGGGAGAGCATTTTATCAGGGCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTAGCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTTTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAAg ]
[-] EMBL CB629760 [ GTTGGGGAGAGCATTTTATCAGGTCTTATCGAAGAAGCTGCTCTGGACATGTGGGTACATTGATCTGGGAAAATGAAGCCTAGGTGGTTCTTGCGTTCTTGGAGAATTTCTACCTTTGTTCTCCACTTGGCTGGCACTTCTCATGATTTCCAGTTTCCAGTTTGTATCTATCTTGTGTTACATTTCACCTGTGTAAAAAATGAAAAATGTGCAATGATTTAGAGAGTTGCCTAAAGAAGTGATGGAGTTGTCTTCACCAAGAAACAATTGTAATTTGTGCACAAGGTATGAAGGCATGATGAATAGACAAAGAGCAATGTTTCGTTTCACTTTTTCCTTTCGATGAATGAACAATGCCGAGGAATCGCAAATAGCAATGAGCAAGGACAGTTCTTGTTTTCATTTCTTTTTTTTTTAAAAAAAAGCTAGTTGAATACCCGTATGTTATAAAGGGTCACGCTCATATAATTAGGGACGGATTAGACGGGTGATTGATGATACAATATTGGATCTGGTGGTTACTTTTTACAAACGAGAACACACGTACATTGAGAGGAGGAAATAAAAGGAGAAGGGCCCCATTTTTAAAGTAGTAACTAGCATTGAGAGTAGGAAATAAAATGAGGACAGTTGTGTTTGCTAGGGGAGGATGGGAAAATGCACACTACGCTCGGAAGGCGAAGTAGTCTATTAGCGTCTATTAGCGCGTGATTAATTAAGTATTAGTTATTTTTTTAAAAAAAAATTGGGGCAATA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||