cluster # 11750

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11750 cluster # 11750 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11750#0 length = 1086 sequences # 9
consensusID : consensus_11750#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1086
fasta sequence
                              [TTTTTTTGACATCAAATTTCAGCCAGGAGCCAACCAGGAACTGCGACGATATATAAGATTGGCAGAGCTAACTCGTAAACCTAGACCAGAGAAAAGAAAAATACACAGCAGCTGAATTCTTCATGGTCTCGCAGGACGATGCTTAACAGTTGACACCAATACATCAAAAACCTACAACATCCAAGACCTGTGAAAAATACTCCAGCTGACTTAATACGGCACCAACAGGGATCACTCTTGATCTCTAAAGAGACAAAAAAAACCCCCTTAATTTATAATTCATATTTGGTAGCAGTGAAAAGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGACAAATGCTGTCTCTCTAAGTACCAGTACTCTTTCATCTGCAAAGGAGTACCAGTACATACACCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC-TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCA-GTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACA-GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAATTGCTGTCGTTGCT-T-TCTCTTCGTGAATTTGATCTCGCGCCCGGGATAGCAAATCCCGCAGTTCGCTTAAGCCCCGGGCTGAAGCTGACGCCTGGACTATGAAGCTGGAGAGAGAGAGAGAGAGAGAGGGATCTTGGTAGGAAGAGAGAGAGAGAGAGAGTTTCTACTCCTTCAGTCCAGTCAGGTC]

[+] EMBL CA759779             [TTTTTTTGACATCAAATTTCAGCCAGGAGCCAACCAGGAACTGCGACGATATATAAGATTGGCAGAGCTAACTCGTAAACCTAGACCAGAGAAAAGAAAAATACACAGCAGCTGAATTCTTCATGGTCTCGCAGGACGATGCTTAACAGTTGACACCAATACATCAAAAACCTACAACATCCAAGACCTGTGAAAAATACTCCAGCTGACTTAATACGGCACCAACAGGGATCACTCTTGATCTCTAAAGAGACAAAAAAAACCCCCTTAATTTATAATTCATATTTGGTAGCAGTGAAAAGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGACAAATGCTGTCTCTCTAAGTACCAGTACCCTTTCATCTGCAAAGGAGTACCAGTACATACACCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACNAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGG                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF293677             [                                                                                                tttttTACACAGCAGCTGAATTCTTCATGGTCTCGCAGGACGATGCTTAACAGTTGACACCAATACATCAAAAACCTACAACATCCAAGACCTGTGAAAAATACTCCAGCTGACTTAATACGGCACCAACAGGGATCACTCCTGATCTCTAAAGAGACAAAAAAAACCCCCTTAATTTATAATTCATATTTGGTAGCAGTGAAAAGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGACAAATGCTGTCTCTCTAAGTACCAGTACTCTTTCATCTGCAAAGGAGTACCAGTACATACACCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF278706             [                                                                                                                                                                                                                                                                    tttttttTTAATTTATAATTCATATTTGGTAGCAGTGAAAAGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGACAAATGCTGTCTCTCTAAGTACCAGTACTCTTTCATCTGCAAAGGAGTACCAGTACATACACCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CF276850             [                                                                                                                                                                                                                                                                    tttttttTTAATTTATAATTCATATTTGGTAGCAGTGAAAAGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGACAAATGCTGTCTCTCTAAGTACCAGTACTCTTTCATCTGCAAAGGAGTACCAGTACATACACCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCA GTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACA GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCC                                                                                                                                                                                                                                                                                                ]
[-] EMBL BI799237             [                                                                                                                                                                                                                                                                                                                                                                                                                                                            tttTTGAATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCAGGTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACAGGTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAA TGCTGTCGTTGCTATATCTCTTCGTGAA TTGATCTCGCGCCCGGGAT                                                                                                                                            ]
[-] EMBL CF293678             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AATGCGTACTGATATAGTACCTAGATATCCAGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCA GTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACA GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGCTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAATTGCTGTCGTTGCT T TCTCTTCGTGAATTTGATCTCGCGCCCGGGATAGCAAATCCCGCAGTTCGCTTAAGCCCCGGGCTGAAGCTGACGCCTGGACTATGAAGCTGGAGAGAGAGAGAGAGAGAGAGGGATCTTGGTAGGAAGAGAGAGAGAGAGAGAGTTTCTACTCCTTCAGTCCA        ]
[-] EMBL CF276849             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGTCACTCGAAATCTGCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCCNTACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCA GTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACA GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAATTGCTGTCGTTGCT T TCTCTTCGTGAATTTGATCTCGCGCCCGGGATAGCAAATCCCGCAGTTCGCTTAAGCCCCGGGCTGAAGCTGACGCCTGGACTATGAAGCTGGAGAGAGAGAGAGAGAGAGAGGGATCTTGGTAGGAAGAGAGAGA                                    ]
[-] EMBL CF278705             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCTGCCAAAGGATAGTGCCATATGCTCAACCTGGAAAGAACTGCTAGCACACCC TACTCACTCTAGTTCCTGATAGCAATCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTCGAGGAGCGCCTTCA GTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACGTCCCTACA GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAATTGCTGTCGTTGCT T TCTCTTCGTGAATTTGATCTCGCGCCCGGGATAGCAAATCCCGCAGTTCGCTTAAGCCCCGGGCTGAAGCTGACGCCTGGACTATGAAGCTGGAGAGAGAGAGAGAGAGAGAGGGATCTTGGTAGGAAGAGAGAGAGAGAGAGAG TTCTACTCCTTCAGTCCAGTCAGGTC]
[-] EMBL OSS4063A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGGTGTCACCCTCGACGTCCCTACA GTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAGCTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGGGGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAATTGCTGTCGTTGCT T TCTC NCGTGAATTTGATCTCGCGCNCGGGATAGCAAATCCCGCAGTTCGCTTAAGCCCCGGGCTGAAAGTGACGCCTGGACTA                                                                                        ]




>consensus_11750#0
TTTTTTTGACATCAAATTTCAGCCAGGAGCCAACCAGGAACTGCGACGATATATAAGATT
GGCAGAGCTAACTCGTAAACCTAGACCAGAGAAAAGAAAAATACACAGCAGCTGAATTCT
TCATGGTCTCGCAGGACGATGCTTAACAGTTGACACCAATACATCAAAAACCTACAACAT
CCAAGACCTGTGAAAAATACTCCAGCTGACTTAATACGGCACCAACAGGGATCACTCTTG
ATCTCTAAAGAGACAAAAAAAACCCCCTTAATTTATAATTCATATTTGGTAGCAGTGAAA
AGAAAAGGCCCTGAAAAATTGATGTAACTACACAGGTTGGTAACTAGTATATAACATGAC
AAATGCTGTCTCTCTAAGTACCAGTACTCTTTCATCTGCAAAGGAGTACCAGTACATACA
CCAGTACTCTTAATAATTTGCTCTCGATTGAATGCGTACTGATATAGTACCTAGATATCC
AGATGTATACTAGAAAATGTACATCAAGTCACTCGAAATCTGCTGCCAAAGGATAGTGCC
ATATGCTCAACCTGGAAAGAACTGCTAGCACACCCTACTCACTCTAGTTCCTGATAGCAA
TCTCTTCAAAGTTCCAGTCCCTGACAAGATCCCTTGAAACAGCACGGCTTCGTTGAAGTC
GAGGAGCGCCTTCAGTGCCTTGGCCAGCAGCCATTAGAGGAAAAGGTGTCACCTTCGACG
TCCCTACAGTGTTAGCGGTTCCAGCAGGCATTACTCGCCGTGTTAGGCAGGCAACAACAG
CTCCACACCTGTTCTCCTCCTCCGAACTTGAGACCGAATAGCTCCTAAACGAGTGCGAGG
GGCTGCTCATGCCATGGCATACTAGACAAGCTAGACTCATGGTTATGATGCAGCTGAAAT
TGCTGTCGTTGCTTTCTCTTCGTGAATTTGATCTCGCGCCCGGGATAGCAAATCCCGCAG
TTCGCTTAAGCCCCGGGCTGAAGCTGACGCCTGGACTATGAAGCTGGAGAGAGAGAGAGA
GAGAGAGGGATCTTGGTAGGAAGAGAGAGAGAGAGAGAGTTTCTACTCCTTCAGTCCAGT
CAGGTC
clustalw multiple alignements is not computed in this case