cluster # 11752

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Oryza sativa
cluster # 11752 cluster # 11752 Sequences # 9 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11752#0 length = 1051 sequences # 9
consensusID : consensus_11752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1051
fasta sequence
                              [AGTTCTCGATCTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT-GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC-AAGGGTTGTGCATACAT-AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAGAAATGGNTGATTTAAAAAA]

[+] EMBL OSS11782A            [AGTTCTCGATCTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATNAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGTAGGGGCTTCTCCGGGGCGCGTGCNC CTNGCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGNCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAAATGCTTCTACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK060123             [          CTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATACAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAA                                                                                     ]
[+] EMBL AK104184             [             GATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATTCAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAA                                                                                                                      ]
[+] EMBL AK060127             [                 TGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGGGGCGCGTGCGCGCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTCTACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTTTGCTTCCTCCTCGAC AAGGGTTGTGCATACAT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAAT                                                                     ]
[+] EMBL OSS13776A            [                                CGAGGACGACAGAACGAAGATGAGTTCGTACATGGAGGCGGCGNCGGCGGCGAGGGCGGCGGAGGCGAAGACGTAGGGGCTTCTCCGGGGCGCGTGCG GCT GCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACGGAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTGTTGGCGATGNCGGCGGCGGCGTCGTCCGGCTACCACCTGCTGCAGTTGCTAAGATGTTTCTACCTCAGNCGCTTCGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU095967             [                                                                                                                                                                                                                                                                                                                                                                       TTGGCTTCCTCCTCGACAAAGGNTTGTGCATACATAAACATTCGCGACGACGGTGGCAGCGGCTCAGNCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCNTNTCCCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTNTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAGAAATGGTTGATTTAAAAAA]
[+] EMBL CB096292             [                                                                                                                                                                                                                                                                                                                                                                                                       ccT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGTCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCCATGCTTTCACCTGCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCTCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATATCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATCTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGGTTCAGTGCAGAAGTGATAATGGTACACACTGAAATTGGTGNGGATAACAGAACTAAGNTCAGNTCAGNTACCACCAGAGGTAAAGAAATGGNT           ]
[+] EMBL CA767202             [                                                                                                                                                                                                                                                                                                                                                                                                       ccT AACATTCGCGACGACGGTGGCAGCGGCTCAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAACATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCCGTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTTTTCCGCCTCTATCCCTCCATGCTTTCACCTGCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCTCTAGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATATCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATCTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTCAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCCCATAAGAACAATAGTAGAGAAGATGGCTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGGTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGNTCAGTTACCACCAGAGGTAAAGAAATG              ]
[+] EMBL AU096468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCCGCCCGCAACNTCTTCCGCATNTATCCCTCCATGCTTTCACCTCCGCCGTNTT CTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCTAGGCCTTCGTTTGTACTCTTNTATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACCCAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTAATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTNAAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTGTCTCATAAGAACNATAGTAGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAGTGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCACCAGAGGTAAAAAAAaaaaaaaa        ]




>consensus_11752#0
AGTTCTCGATCTCGATCTGAGCGAGGCGGCGACGAGGACGACAGAACGAAGATGAGTTCG
TACATGGAGGCGGCGGCGGCGGCGAGGGCGGCGGAGGCGAAGACGGAGGGGCTTCTCCGG
GGCGCGTGCGCGCTGCTGGCGGCGGCGGCGGCGCTGCTGGTGGGGCTCAACACGCAGACG
GAGACGGTGCTGTTCATCAGGAAGAAGGCCACCGTCAAGGACGTCCAGGCCCTCTGGGTG
TTGGCGATGGCGGCGGCGGCGGCGGCCGGCTACCACCTGCTGCAGCTGCTAAGATGCTTC
TACCTCAGCCGCTTCGCCGACGGCAAGCCCTGCCGGCATCGCAGGGCCATAGCCTGGCTT
TGCTTCCTCCTCGACAAGGGTTGTGCATACATAACATTCGCGACGACGGTGGCAGCGGCT
CAGGCATGCGTGGTGGCACTATATGGCACGCACGCGTTGCAGTGGACTAAGCTTTGCAAC
ATCTACACCCGCTTCTGCGAGCAGGTTGCTGGTAGCCTTGTGTGTGCCATGCTCGCTGCC
GTCGGTACTGCCCTCCTCTCCGTCGTCTCCGCCCGCAACCTCTTCCGCCTCTATCCCTCC
ATGCTTTCACCTCCGCCGTCTTCCTTCGTGGGATAGACATTGTCCACCGCCCCTCTCCCT
AGGCCTTCGTTTGTACTCTTATATTGGGCTGCATAGAAAAATTAAGCCCAACTATAGACC
CAAGTAAAGCATACCTACCTTTTATTTTTCTTAACTTTTGTTAGAGTGCATTTAGGAGTA
ATACTTATCCACATGTAGTATATACTCCACAGAAGGTATATGTTCTTGTACCTCTCTCTC
AAAAAAGTGTATCCATAGGTAATGTGCTTTGCTTCCTCTCTCTCTCATAAGAACAATAGT
AGAGAAGATGGTTGTAAGGTAATTAAGGACCAACCTTTGTGGCATGTTTCAGTGCAGAAG
TGATAATGTTACACACTGAAATTGTTGTGGATAACAGAACTAAGTTCAGTTCAGTTACCA
CCAGAGGTAAAGAAATGGNTGATTTAAAAAA
clustalw multiple alignements is not computed in this case