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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11788#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1347 fasta sequence
[TCAGACTTCTCTCCTCTATCGCTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGGTATGATCCCCTCTCGCCTGCGCATACCAGGTCCCTCGCTCGATCCAATCTTCGGTTGATTGAAGCGAATCTGGAGGCTTTGCCTCTCTAGTAGGTTTTTTTTCCTGATTATTTCCACTCACATTTGCTTGCGCATCTCAAACACTATTGTGGAGAAGTGGGGAGGTGGTGAAAACTGGCAATGGGATCGTTGTGGGCCGGATCAGGGATGAATCTTGGGGGATTATTGCCTTCTGCTCGCCGCTATAGACGTATGCTTGTTTAGTTTTAGTATTCTGACTCTTTTCGGCTGATCGTATCATCATAAAAGCTCTTGGTCCACTCTGTGGTTTGATTTTGTGCAAGAAGAAATATAATATCGCATGATTATATTCTGTGATCGTAGATTGGGATAGAGAGCAGATGTTATTTTGTGCACGCACACTTTTAAAATCCTCTGATATGGTTAACTAATTCCGTGACCTCTTCATTCAGCAAACCTGTACATGGGTAAACAAGCATAACTGAATTACAGGCAAGCCGGTAGCTTGGAAAGAACCCTCTTACTCCCAGTAAAAACAATAGGAGGCCCACTACTGCTATTTTCTTTATTGTGCTTCTGAATGCAAAGTAGCACAAGTAGGGATATTAGGTATGGGAGAGAAAGTCCTTTTGTTTTGTTGTTATCCTCGTTATTGTAACTGTTATCCGGTGCCAAATTAGCACCTGTTATTGTAACTAAAAGTCAGTGGCTTTTATTAGAAGATAACATCTTCCATTTTTTATTTATACCTCTTAAAATGTATCTTGTGAATGCTCGAATTCTGGCATATGTTATGCAATCACATTCATTTGTGTTCTGTTCATTTAGGACTTGTTATATTCCACTCGGCTTTCACTATGTGTTATTTTGTCTAATAATAAAATAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGTAATTGTTCCACAAATATTCATTAAGAATAACGCGGAAATTGATGGGGGGGAATTGCTTATGTTGTACGAAATATGTGCAATGATTGCTTCGATATACCTACAACAAGATTTTGCTCGTATATTTCTTTGTTGATGTCTTTATAGGGTAATTTTGAATCATCCTGTTTGTTGAATAAGTTCCATTGTACCAACATTAAGCAAATCAACAGTGGGAAAATTC]
[+] EMBL AK068212 [TCAGACTTCTCTCCTCTATCGCTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGGTATGATCCCCTCTCGCCTGCGCATACCAGGTCCCTCGCTCGATCCAATCTTCGGTTGATTGAAGCGAATCTGGAGGCTTTGCCTCTCTAGTAGGTTTTTTTTCCTGATTATTTCCACTCACATTTGCTTGCGCATCTCAAACACTATTGTGGAGAAGTGGGGAGGTGGTGAAAACTGGCAATGGGATCGTTGTGGGCCGGATCAGGGATGAATCTTGGGGGATTATTGCCTTCTGCTCGCCGCTATAGACGTATGCTTGTTTAGTTTTAGTATTCTGACTCTTTTCGGCTGATCGTATCATCATAAAAGCTCTTGGTCCACTCTGTGGTTTGATTTTGTGCAAGAAGAAATATAATATCGCATGATTATATTCTGTGATCGTAGATTGGGATAGAGAGCAGATGTTATTTTGTGCACGCACACTTTTAAAATCCTCTGATATGGTTAACTAATTCCGTGACCTCTTCATTCAGCAAACCTGTACATGGGTAAACAAGCATAACTGAATTACAGGCAAGCCGGTAGCTTGGAAAGAACCCTCTTACTCCCAGTAAAAACAATAGGAGGCCCACTACTGCTATTTTCTTTATTGTGCTTCTGAATGCAAAGTAGCACAAGTAGGGATATTAGGTATGGGAGAGAAAGTCCTTTTGTTTTGTTGTTATCCTCGTTATTGTAACTGTTATCCGGTGCCAAATTAGCACCTGTTATTGTAACTAAAAGTCAGTGGCTTTTATTAGAAGATAACATCTTCCATTTTTTATTTATACCTCTTAAAATGTATCTTGTGAATGCTCGAATTCTGGCATATGTTATGCAATCACATTCATTTGTGTTCTGTTCATTTAGGACTTGTTATATTCCACTCGGCTTTCACTATGTGTTATTTTGTCTAATAATAAAATAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGTAATTGTTCCACAAATATTCATTAAGAATAACGCGGAAATTGATGGGGGGGAATTGCTTATGTTGTACGAAATATGTGCAATGATTGCTTCGATATACCTACAACAAGATTTTGCTCGTATATTTCTTTGTTGATGTCTTTATAGGGTAATTTTGAATCATCCTGTTTGTTGAATAAGTTCCATTGTACCAACATTAAGCAAATCAACAGTGGGAAAATTC]
consensusID : consensus_11788#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 640 fasta sequence
[CCCACAGATCCGCTCCTGGCTCCTGC-AAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCNCCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTGAACACGAGGGATGATTATACAATAAGCATTCTTGTTGATGTGAAAAAAAGAGCCAAAAA]
[+] EMBL AU092551 [CCCACAGATCCGCTCCTGGCTCCTGC AAGGCTGCAACTTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTGAACACGAGGGATGATTATACAATAAGCATTCTTGTTGATGTGAAAAAAA ]
[+] EMBL AU092667 [ CAGATCCGTTCCTGGCTCCTGCAAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCNCCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTGAACACGAGGGATNATTATACAATAAGCATTCTTGTTGATGTNAAAAAAA ]
[+] EMBL C97120 [ AGATCCGCTCCTGGCTCCTGC AAGGNTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTNACACGGAAA ]
[+] EMBL C27763 [ GATCCGCTCCTGGCTCCTGC AA GCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGC AACGTAAAACGGCTTGAGCAAG AACTGACACGGAAATTGCGC ACTNAAGGAGCA GCTTC AATGTTTCCCCTGAAGTGATCCA ATGCTTCTTAGGCATGTAACCNCCGT AAG ACTG TTAAAGTTTG CGTCCTNCCG CCAATTAAGCAG GNTT GGCTC AATTGTG ]
[-] EMBL CF276912 [ AGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCCCCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAAAAAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTAGTGAACACGAGGGATGATTATACAATAAGCATTCTTGTTAATGTGATTTGGCGAGCCAAAAA]
consensusID : consensus_11788#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 594 fasta sequence
[ACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGCAAAATCAGCAAGGCTTCGTCAGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTGAACACGAGGGATG]
[+] EMBL CB096892 [ACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGCAAAATCAGCAAGGCTTCGTCAGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTGAACACGAGGGATG]
[+] EMBL CA765251 [ CAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGCAAAATCAGCAAGGCTTCGTCAGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAAATTGTGTGCTACCTTTTTGTTAATTCCAAGATGGATTACAAATTTACGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTGGTG ]
consensusID : consensus_11788#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 564 fasta sequence
[CTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAANATTGTGTGCTCCTTTTTTGTTAATTCCAAGATGGATTACAAATTTACCGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTT]
[+] EMBL CF276911 [CTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAACCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATTGGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTGAGTACCGTGCTCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAGTAGCGGTGATTCTGGTGCAAACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGCAGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCTTCTTAGGCATGTAACCACCGTGAAGAACTGATAAAAGTTGGGACGTCCTGCCGACAAATTAAGCAGAGATTGGGCTCAANATTGTGTGCTCCTTTTTTGTTAATTCCAAGATGGATTACAAATTTACCGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAGCCGCAGCAGATTTATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11788#2 ---------------------------ACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAA 33
consensus_11788#3 ---------------------CTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAA 39
consensus_11788#1 ------------------------CCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAA 36
consensus_11788#0 TCAGACTTCTCTCCTCTATCGCTAGCCACAGATCCGCTCCTGGCTCCTGCAAGGCTGCAA 60
*********************************
consensus_11788#2 CCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAG------------------ 75
consensus_11788#3 CCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAG------------------ 81
consensus_11788#1 CCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGTTCCTCACACCATGTAGC 96
consensus_11788#0 CCTGCAACCCCAACACCCCTTCGAGAATCGTCGTGCGCGCAGGTATGATCCCCTCTCGCC 120
******************************************
consensus_11788#2 --AAGGAAGATGGATGCTAACAGACGCCAA-----GGTGGAATTCAGCAATTATTGG--- 125
consensus_11788#3 --AAGGAAGATGGATGCTAACAGACGCCAA-----GGTGGAATTCAGCAATTATTGG--- 131
consensus_11788#1 AGAAGGAAGATGGATGCTAACAGACGCCAA-----GGTGGAATTCAGCAATTATTGG--- 148
consensus_11788#0 TGCGCATACCAGGTCCCTCGCTCGATCCAATCTTCGGTTGATTGAAGCGAATCTGGAGGC 180
* ** ** * **** *** ** * *** * * * *
consensus_11788#2 -CTGCAGAGCAAGAAG-----CTCAACAGATTGTTAATGCTGCTAGGAGCGCAAAATCAG 179
consensus_11788#3 -CTGCAGAGCAAGAAG-----CTCAACAGATTGTTAATGCTGCTAGGAGCG--------- 176
consensus_11788#1 -CTGCAGAGCAAGAAG-----CTCAACAGATTGTTAATGCTGCTAGGAGCG--------- 193
consensus_11788#0 TTTGCCTCTCTAGTAGGTTTTTTTTCCTGATTATTTCCACTCACATTTGCTTGCGCATCT 240
*** * ** ** * * **** ** ** * **
consensus_11788#2 CAAGGCTTCGTCAGGCAAAAGAGGAGGCTGAGAGAGAAATAGCTG-AGTACCGT----GC 234
consensus_11788#3 --------------GCAAAAGAGGAGGCTGAGAGAGAAATAGCTG-AGTACCGT----GC 217
consensus_11788#1 --------------GCAAAAGAGGAGGCTGAGAGAGAAATAGCTG-AGTACCGT----GC 234
consensus_11788#0 CAAA-CACTATTGTGGAGAAGTGGGGAGGTGGTGAAAACTGGCAATGGGATCGTTGTGGG 299
* * *** ** * * ** ** * ** * * *** *
consensus_11788#2 TCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAG-TAGCGGTGATTCTGGTGCAA 293
consensus_11788#3 TCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAG-TAGCGGTGATTCTGGTGCAA 276
consensus_11788#1 TCAGATGGAAGCTGAGTTCCAGAGGAAGGTTGCGGAGAG-TAGCGGTGATTCTGGTGCAA 293
consensus_11788#0 CCGGATCAGGGATGAATCTTGGGGGATTATTGCCTTCTGCTCGCCGCTATAGACGTATGC 359
* *** * *** * * *** **** * * ** * ** **
consensus_11788#2 ACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGC------ 347
consensus_11788#3 ACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGC------ 330
consensus_11788#1 ACGTAAAACGGCTTGAGCAAGAAACTGACACGAAAATTGCGCAACTGAAGGAGC------ 347
consensus_11788#0 TTGTTTAGTTTTAGTATTCTGACTCTTTTCGGCTGATCGTATCATCATAAAAGCTCTTGG 419
** * * ** ** * ** * * * ***
consensus_11788#2 ---AGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCT-TCTTAGGCATGTAACC--- 400
consensus_11788#3 ---AGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCT-TCTTAGGCATGTAACC--- 383
consensus_11788#1 ---AGGCTGCAAATGTCTCCCCTGAAGTGATCCAGATGCT-TCTTAGGCATGTAACC--- 400
consensus_11788#0 TCCACTCTGTGGTTTGATTTTGTGCAAGAAGAAATATAATATCGCATGATTATATTCTGT 479
* *** * * ** * * * ** * ** * * * ** *
consensus_11788#2 -ACCGTGAA---GAACTGATAAAAGTTGG-ACGTCCTGCCGACAAATTAAGCAGA----- 450
consensus_11788#3 -ACCGTGAA---GAACTGATAAAAGTTGGGACGTCCTGCCGACAAATTAAGCAGA----- 434
consensus_11788#1 -NCCGTGAA---GAACTGATAAAAGTTGG-ACGTCCTGCCGACAAATTAAGCAGA----- 450
consensus_11788#0 GATCGTAGATTGGGATAGAGAGCAGATGTTATTTTGTGCACGCACACTTTTAAAATCCTC 539
*** * * * ** * ** ** * * *** ** * * * *
consensus_11788#2 -GATTGGGCT---CAAA-TTGTGTGCTACCTTTTTGTTAATTCCA-AGATGGATTA-CAA 503
consensus_11788#3 -GATTGGGCT---CAANATTGTGTGCTCCTTTTTTGTTAATTCCA-AGATGGATTA-CAA 488
consensus_11788#1 -GATTGGGCT---CAAA-TTGTGTGCTACCTTTTTGTTAATTCCA-AGATGGATTA-CAA 503
consensus_11788#0 TGATATGGTTAACTAATTCCGTGACCTCTTCATTCAGCAAACCTGTACATGGGTAAACAA 599
*** ** * ** *** ** ** ** * * **** * * ***
consensus_11788#2 ATTTA-C-GGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAG 561
consensus_11788#3 ATTTA-CCGGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAG 547
consensus_11788#1 ATTTA-C-GGATGTCAGCTATAGCCACGAACCCTGTTCTTAGTCATACAATACCAATAAG 561
consensus_11788#0 GCATAACTGAATTACAGGCA-AGCCGGTAGCTTGGAAAGAACCCTCTTACTCCCAGTAAA 658
** * * ** *** * **** * * * * * * * *** ***
consensus_11788#2 --CCGCAGCAGATTTATTGGTGA-ACACGAGGGATG------------------------ 594
consensus_11788#3 --CCGCAGCAGATTTATTT----------------------------------------- 564
consensus_11788#1 --CCGCAGCAGATTTATTGGTGA-ACACGAGGGATGATTATACAATAAGCATTCTTGTTG 618
consensus_11788#0 AACAATAGGAGGCCCACTACTGCTATTTTCTTTATTGTGCTTCTGAATGCAAAGTAGCAC 718
* ** ** * *
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ATGTGAAAAAAAGAGCCAAAAA-------------------------------------- 640
consensus_11788#0 AAGTAGGGATATTAGGTATGGGAGAGAAAGTCCTTTTGTTTTGTTGTTATCCTCGTTATT 778
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 GTAACTGTTATCCGGTGCCAAATTAGCACCTGTTATTGTAACTAAAAGTCAGTGGCTTTT 838
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 ATTAGAAGATAACATCTTCCATTTTTTATTTATACCTCTTAAAATGTATCTTGTGAATGC 898
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 TCGAATTCTGGCATATGTTATGCAATCACATTCATTTGTGTTCTGTTCATTTAGGACTTG 958
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 TTATATTCCACTCGGCTTTCACTATGTGTTATTTTGTCTAATAATAAAATAGTTCCTCAC 1018
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 ACCATGTAGCAGAAGGAAGATGGATGCTAACAGACGCCAAGGTGGAATTCAGCAATTATT 1078
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 GGCTGCAGAGCAAGAAGCTCAACAGATTGTTAATGCTGCTAGGAGCGGTAATTGTTCCAC 1138
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 AAATATTCATTAAGAATAACGCGGAAATTGATGGGGGGGAATTGCTTATGTTGTACGAAA 1198
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 TATGTGCAATGATTGCTTCGATATACCTACAACAAGATTTTGCTCGTATATTTCTTTGTT 1258
consensus_11788#2 ------------------------------------------------------------
consensus_11788#3 ------------------------------------------------------------
consensus_11788#1 ------------------------------------------------------------
consensus_11788#0 GATGTCTTTATAGGGTAATTTTGAATCATCCTGTTTGTTGAATAAGTTCCATTGTACCAA 1318
consensus_11788#2 -----------------------------
consensus_11788#3 -----------------------------
consensus_11788#1 -----------------------------
consensus_11788#0 CATTAAGCAAATCAACAGTGGGAAAATTC 1347
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||