cluster # 11828

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Oryza sativa
cluster # 11828 cluster # 11828 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11828#0 length = 2811 sequences # 5

consensus_11828#1 length = 2263 sequences # 4

consensusID : consensus_11828#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2811
fasta sequence

                              [TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCTCACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCTCCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGGGAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTCCGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTAATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTTAGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAG-AGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT-AC-AAATGTCTATTAACA-GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG-CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA]

[+] EMBL AK101319             [TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCTCACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCTCCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGGGAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTCCGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTAATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTTAGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAG AGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGT                             ]
[+] EMBL CB670500             [                                                                                                                                                                                                                                                                        AATAAGATCCTCCTCAAGAGCAAATTCAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB670501             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATTTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATTTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATTTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTAT                                                                                          ]
[-] EMBL CA998467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAGCAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCGTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACTGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGT AC AAATGTCTATTAACA GGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCCAATGGGCTTATG CCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAG             ]
[+] EMBL BI801145             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTGGACCTGAAGAAATTGCTTGTGTGACAAAATGTCTATTAACACGGGAATACCTTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATGTGAAGGAATCC ATGGGCTTATGCCCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTTCCCCTTTAACTGCTGC AACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA]




>consensus_11828#0
TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCT
CACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCT
CCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGG
GAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTC
CGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCC
ACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAAT
TATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGA
CCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCT
TATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCA
AAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCC
AGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGC
ATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCA
CTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAA
AAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACA
GAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAA
TGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTA
GCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGC
AGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACT
CTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTA
ATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTT
AGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGA
TCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATG
GTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCAT
CAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTC
CACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGT
TATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTC
CCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGC
TGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGA
TTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATC
GGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTG
GGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGC
TATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTT
TCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCC
AACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAAC
CTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTG
GTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTC
CTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATG
AGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTG
ATAGAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAAC
ACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCT
TGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTT
GCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGA
TGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAGG
TTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATGT
CTATTAACAGGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAATG
TGAAGGAATCCAATGGGCTTATGCCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTTT
CCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA

consensusID : consensus_11828#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2263
fasta sequence

                              [CACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTT]

[+] EMBL AK060754             [CACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGGCTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTT]
[+] EMBL CB645919             [                                                                                                                                                                                                                                                                             AATCTCCAATCTGTGATCTTGTCGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB646057             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGGTGGACTTCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGCCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF305672             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_11828#1
CACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAA
TTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGG
ACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCC
TTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGC
AAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGC
CAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGG
CATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGC
ACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAA
AAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGAC
AGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAA
ATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGT
AGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAG
CAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATAC
TCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTTATTCAATA
TAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGT
GTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCA
GGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGG
ACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGT
ATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATAT
GGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGG
GCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGT
AGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATT
TAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGC
TGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTT
GATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAA
GACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTG
GACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATC
AGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAG
AACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGG
AGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAA
TAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGA
CACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGAT
GGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTAT
ATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTG
GACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATA
TGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACA
CAGGGACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAA
TTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11828#0      TGTAACAAAGAAACAAGGATCCATCGATCGATCGATCGATCTCCATCGACATCGAGTCCT 60
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      CACTCTCTGCCTGCGGCTGCGCCGTCGCGTGCCGCCGATCTCCATCACCACCTGCGGCCT 120
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      CCACTGCCCAATCCCCGTCTCCTCGCTGATTCCCGCCGCCGAGGAGGAGGGGGAGGGAGG 180
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      GAGGGAGGGGGGGCAGCAGCGGTGGGTGCCCCGTCGTCCTGCTGCTCTCCGCCTCCGCTC 240
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      CGGATCTGGAGCTGAGATTAATGAAATAAGATGCTCCTCAAGAGCAAATTCAAGTTGGCC 300
consensus_11828#1      -----------------------------------------------------------C 1
                                                                                  *

consensus_11828#0      ACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAAT 360
consensus_11828#1      ACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTCCTTGCGAAT 61
                       ************************************************************

consensus_11828#0      TATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGA 420
consensus_11828#1      TATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTTCCGTTTGGA 121
                       ************************************************************

consensus_11828#0      CCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCT 480
consensus_11828#1      CCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCATTTACACCCT 181
                       ************************************************************

consensus_11828#0      TATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCA 540
consensus_11828#1      TATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTTATTTATGCA 241
                       ************************************************************

consensus_11828#0      AAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCC 600
consensus_11828#1      AAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTCGCCGTTGCC 301
                       ************************************************************

consensus_11828#0      AGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGC 660
consensus_11828#1      AGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGTGCAAAAGGC 361
                       ************************************************************

consensus_11828#0      ATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCA 720
consensus_11828#1      ATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTCATTTCCGCA 421
                       ************************************************************

consensus_11828#0      CTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAA 780
consensus_11828#1      CTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAGGCTAGAAAA 481
                       ************************************************************

consensus_11828#0      AAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACA 840
consensus_11828#1      AAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATATTACGTGACA 541
                       ************************************************************

consensus_11828#0      GAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAA 900
consensus_11828#1      GAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAATGGAGGCAAA 601
                       ************************************************************

consensus_11828#0      TGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTA 960
consensus_11828#1      TGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGATGCAGGGTA 661
                       ************************************************************

consensus_11828#0      GCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGC 1020
consensus_11828#1      GCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAAATAGTTAGC 721
                       ************************************************************

consensus_11828#0      AGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACT 1080
consensus_11828#1      AGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTAAGAGATACT 781
                       ************************************************************

consensus_11828#0      CTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGTTTGTGTAATTTGGATTAAATTTCTA 1140
consensus_11828#1      CTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGG-------------------------- 815
                       **********************************                          

consensus_11828#0      ATGTAAGCAGATGGATATCCTTCTAATATCTTCCTAGCAGTTATTGTTTGACTGGCTGTT 1200
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      AGTTTCTTCTTCTCTAGGATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGA 1260
consensus_11828#1      ------------------ATATTCATACAGAACTTATTCAATATAGAAGGAATCAGATGA 857
                                         ******************************************

consensus_11828#0      TCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATG 1320
consensus_11828#1      TCAAACGAGGAACTGTAAAGGAACAATTATCAGTTGATTCAGTGTCCAGGAAGATAAATG 917
                       ************************************************************

consensus_11828#0      GTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCAT 1380
consensus_11828#1      GTTCATGTCCACTCATGCCAGAAGAGGTTGGACTTCTGCTTCAGGCATTAGGTTATCCAT 977
                       ************************************************************

consensus_11828#0      CAACTACAAGAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTC 1440
consensus_11828#1      CAACTACAATAATATACTTGGCTGGTTCTGAAACTTTTGGTGGACAGAGAATACTTATTC 1037
                       ********* **************************************************

consensus_11828#0      CACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGT 1500
consensus_11828#1      CACTACGAGCTATGTATGCCAACTTAGTTGATCGCACTTCTGTATGTAGTCAGAGGGAGT 1097
                       ************************************************************

consensus_11828#0      TATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTC 1560
consensus_11828#1      TATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCATCAGATATGGCACACCCTCCACCTC 1157
                       ************************************************************

consensus_11828#0      CCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGC 1620
consensus_11828#1      CCAAAACTGAGAAAGAACTCGTTGACGAATGGAAGAGAGCAGGGCCTCGCCCAAGACCGC 1217
                       ************************************************************

consensus_11828#0      TGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGA 1680
consensus_11828#1      TGCCACCACCTCCTGCAAGGCCATACTATGCTCATGAAAAAGTAGGCTGGTATGGCTGGA 1277
                       ************************************************************

consensus_11828#0      TTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATC 1740
consensus_11828#1      TTGGTGAGAATGACACAGAACCAGATCCTTCTCCCGTTGAATTTAGAAGGCAAGCGCATC 1337
                       ************************************************************

consensus_11828#0      GGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTG 1800
consensus_11828#1      GGTTGCTCTGGGACGCACTTGATTATTTTGTTTCGGTTGAAGCTGATGCATTCTTTCCTG 1397
                       ************************************************************

consensus_11828#0      GGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGC 1860
consensus_11828#1      GGTTTCATAATGATGGGAGTGGCTGGCCAGACTACTCAAGTTTGATCATGGGGCATCGGC 1457
                       ************************************************************

consensus_11828#0      TATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTT 1920
consensus_11828#1      TATACCAAACCCCATCTGGTATAACCTATAGGCCTGACAGAAAGACTATTTCTGCGCTTT 1517
                       ************************************************************

consensus_11828#0      TCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCC 1980
consensus_11828#1      TCGAAAATGTTAGTGACCATCGGTATCACCCGCCACGGAATTGGACATTGGCTGCACGCC 1577
                       ************************************************************

consensus_11828#0      AACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAAC 2040
consensus_11828#1      AACATCTCAATAACAGTGCAAGTGTAGAAGGCATTGTAAAATCAGCGATGCTGTCAAAAC 1637
                       ************************************************************

consensus_11828#0      CTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTG 2100
consensus_11828#1      CTGTATCTTTTCTTGCCCACCCATTACCAGAGTGTTCTTGTAGAACGCCAAAGTCACCTG 1697
                       ************************************************************

consensus_11828#0      GTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTC 2160
consensus_11828#1      GTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTCCTATTTGGAGGTGAAGAAGAGTGTC 1757
                       ************************************************************

consensus_11828#0      CTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATG 2220
consensus_11828#1      CTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCTACCAAGAATAATGAGCCTCAAAATG 1817
                       ************************************************************

consensus_11828#0      AGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTG 2280
consensus_11828#1      AGGATTACGACGGCGACTTGCCTGAAGATGATTCTAGCCAAGACACACAGCAGGAATCTG 1877
                       ************************************************************

consensus_11828#0      ATAGA-GTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAA 2339
consensus_11828#1      ATAGAAGTGACATGAATAAATCCTCAGAACAGGATGAGGAGATGGATCCAGATGATTGAA 1937
                       ***** ******************************************************

consensus_11828#0      CACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACC 2399
consensus_11828#1      CACATGCGGAGCTTGGTACTATGGCGCACCTTTTATCCGCTATATCAGCTCCAGGTAACC 1997
                       ************************************************************

consensus_11828#0      TTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTT 2459
consensus_11828#1      TTGAGTGATATCAGCACACATTGCAATTTGCAGGGATCTACTGGACAAATCGGATCAGTT 2057
                       ************************************************************

consensus_11828#0      TGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGG 2519
consensus_11828#1      TGCAGCAACACATCCTGAGCTAGGAGAGCCCAAGAATGATATATGATATGTACACCTCGG 2117
                       ************************************************************

consensus_11828#0      ATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGAACTAACACTTAG 2579
consensus_11828#1      ATGCTTTGCTTGGACTACTATCTTGAGTTATACGACCTCGACACAGGGACTAACACTTAG 2177
                       *********************************************** ************

consensus_11828#0      GTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATG 2639
consensus_11828#1      GTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGACCTGAAGAAATTGCTTGTGTACAAATG 2237
                       ************************************************************

consensus_11828#0      TCTATTAACAGGGAATACATTGATTTTTTTGGGGTGAGTTTGATTTCTGTTACTGTGAAT 2699
consensus_11828#1      TCTATTAACAGGGAATACATTGATTT---------------------------------- 2263
                       **************************                                  

consensus_11828#0      GTGAAGGAATCCAATGGGCTTATGCCTTGTTGATGTGCATCTGTAAAGGACAGCATTTTT 2759
consensus_11828#1      ------------------------------------------------------------
                                                                                   

consensus_11828#0      TCCCCTTTAACTGCTGCAAACGTTACATGTGCCTGTGAGTTTAAAAAAAAAA 2811
consensus_11828#1      ----------------------------------------------------