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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11888#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1987 fasta sequence
[ATCCGCCGCCTCCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG-CGACCC-TACTACCCGCCGCGGCCCACGGACGGCG-GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA-TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC-TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCACGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATAAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGTTGCATATAAAGTTGGTACTGGGCTGGTTATTGCTCGAAGAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAAATATACTATTTTCCAAAAA]
[+] EMBL AK121278 [ATCCGCCGCCTCCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG CGACCC TACTACCCGCCGCGGCCCACGGACGGCG GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCACGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCATCGTATGATCTTGGGAGACGTGGTATGTCTATGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATAAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGTTGCATATAAAGTTGGTACTGGGCTGGTTATTGCTCGAAGAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAAATAT ]
[+] EMBL C27139 [ CCAAAAAGCATCCACCTGTACCCACAAACGGAAGCAAAGATTCCAACTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGA CGAGTCGACCCTTACTACCCGCCGCGGCCCACGGA GGCGTTCTCNNGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGTGGCGGCGGCGGCGATGGCATGACCGCCGTT NGGGATTTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTNGTCGACGATCCTGATACTACCACTACAAGTGATTNCAACACTGATATGAGTTAGGATCTTTNTAAAGAGGGAAGAAGGGATGAA TTNCATTGTGAT CCCCGTTTTACGAACATAATTGCATnt ]
[+] EMBL CB630082 [ AGATT CTTTTTTCGATCGAGAGCCTCGCCGTCGATTCCCCCACCTCGGCTGAGCCCGGATTCCGAGGCAGCCCCCCCATGGCGGGAGCCGAG CGACCC TACTACCCGCCGCGGCCCACGGACGGCG GCTCCGGCCAGCCCGCCGGCTGCGACTCGCCGATGAGGTGGGACGACGACGACGAAGACCACGGCGGCGGCGGCGGCGATGGCATGACCGCCGTTGCGGGA TTCAACCTGTTCGAGGAAGAATCAGATGACCCTCCTGCCAAAAATGGCGTGGTCGACGATCCTGATACTACCACTACAAGTGATTGCAACACTGATATGAGTGAGGATC TTGTAAAGAGGGAAGAAGGGATGAACTTCCATTGTGATCCCCCGCTTCATGAACATACTGGCATCTGGGTGCCTGTTTCTGTCCCGCCAATGACCAAACGCGATCACGAGGAGTGGCATAAGGGCTTTGGTCATAATGGTGACTACTTTCCAGAAGACGAATTTAACTGGGAGATAGATGAAGAGAACAAGGAGATGACGATGTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCG ]
[+] EMBL CA765312 [ GTGGGATGTATTTTCTGAGATGGTTGTTGCGGCAAAGGATAAGGTAATATCAGTTGCTTCGTATGATCTTGGGAGGCGTGGTATGTCTAAGTTGTCCAAGTTTTTCTTCCAAGAAGCTTGGAAGGATATGGCCCAAACACTTGCAGATGCCAATGCTGGCATTGCGAATGAGCTCCTAGAGACTGAACGAACAATATGGTTACCTGACAGCGCTGCCAGCGCCTGCATGCTCTGTAACGTGCGTTTTCATCCGATAATGTGCTCTCGACATCATTGTCGTTTCTGTGGTGGTGTGTTTTGTGGTGGTTGTTCAAAGGGTAGAAGCTTGATGCCACCGAAATTTAATACTTCAGAACCTCAAAGGGTTTGTGATGTTTGCGGGGTACGTCTAGAGAGTATTCAACCTTACTTGATGAATCGGATCAGTCGTGCTTCACAACCTCCAACTCATGATGTCACTGATCTGAGTACATTGAGGTCGTGGCTGAACTTCCCTTACGCACACACAATGGAATATGAGATCTACAAGGCTGCAAATTCTTTGAATAGTTACTGTAAGGTGGGAAGACTGAAACCAGAAAAGGCTATCCCCTATACTATCCTTAAACAAGCAAAAGGCCTTGCTATAATTACTGTAGCAAAAGTCGGTATGATGGNTGCATATAAAGNTGGTACTGGGCTGGNTATTGCTCGAANAGCCGATGGTTCATGGTCACCCCCTTCAGCAATCGNCACTTGNGGTATTGGATATGGAGCTCAGGCTGGAGGNGAGCTAGCTGATTTCATTATTGGGCTGAGGAACACAAAAACTGNTAAAACNTTTAGNGGNAAGGC CANTTGTCAGTCGGGGCTGGGGGAAGNGCTTNTGTTGG ]
[-] EMBL CB630083 [ GCCGATGGTTCATGGTCACCCCTTTCAGCAATCGCCACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATTGGATCCATGGCTAGACCACCTGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAA CTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCA AA ATATAAAAGAAAAAAAtat ]
[-] EMBL CB639329 [ CACTTGTGGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAAT ]
[-] EMBL CB639326 [ GGTATTGGATATGGAGCTCAGGCTGGAGGTGAGCTAGCTGATTTCATTATTGTGCTGAGGAACACAGAAGCTGTTAAAACTTTCAGTGGAAAGGCACATTTGTCAGTCGGTGCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAAT ]
[-] EMBL CF305781 [ GCTGGTGTAAGTGCTTCTGTTGGCCATGTTGGACGAGTAGCTGAGGCTGATTTTCGTGCCGGTGATGGTGGTTATGCTGCATGTTACACATACAGTTGTAGCAAAGGTGCTTTTGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAAta ]
[+] EMBL AU166822 [ TGTGGGCTGTGCTCTCAATGGTAGCTTAGTATCAACCCGAGACACAGAAAATGCCCGATTTTATGGTGGTCCAATAAAGGCACCCGATATCCTTATGGGATCCATGGCTAGACCACCCGCAGCCGCTGCGCTCTACAAGGTTCTGTCAGAATTGTTTGACAATCCTGAGAAGCAATCGCTTTAGGTCTCTAGTATGCGTTGCGTCTTCTGGTAAATACATTCTGGAACTCTCTGTCAAGTAATTGGATTGCGGTTTTGCGATCTTTTCACTTATTCGTTGGTTGCAGTTTACGCAATTGTACAGTCTGCCATTCATTGACACGCCAAAGGTTTCACATCATGGTTACCACAAAACCAAATGTAAATACATGTACATTGGATCCCTTCTTGCTTCATCAAGATATAAAAGAAAAAAAATATATACTATTTTCCAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||