cluster # 11932

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Oryza sativa
cluster # 11932 cluster # 11932 Sequences # 9 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11932#0 length = 2469 sequences # 8

consensus_11932#1 length = 691 sequences # 1

consensusID : consensus_11932#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 2469
fasta sequence

                              [TCCTTTTTTTTTTTTTAATACTCCAAAGGGCATATCTCACTTACAAGCAAAGAAATGTTTCATCAAAACTCAGACATTAGCTGTTGTAGGGACGTGACAAGCCAACGAGTAACAAAGGTGTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAG-AAGAGGGACCAGCTGATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTGAAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAACAGTACATAAATCTAGTGTGATTGTTTCACTTTTCTCCATCAGAACACTTGCAACATCAGCAGATACGGCATGATCAGACATCTTCTCCATTGCTGCAATAATGCCCCGTATATCATTTCTTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAAATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAGTTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAGAAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAGAAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCTTACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAAATCCCATCCTGTCAATCACAC-CAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAGACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATCTGTTTCACTGTTTTTGCTCCCTGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTAGTTCACTATATCTTGATTGGACCCTAAACGGTGACATTCTTCCAGCAGAAATTTCTCTCCTAGAATCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAGCACTTTCTTTCCTTGAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAGGTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTACATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTGCCTGACTTGGGAACAATAGGTGCCGAGGCAGCGCTTACTTCCATTCTTAAGTTAGCTCTGGGACCAACAACAGGTGCTGAATCAGAGGCCATTTCTGTTCTAGAGTTTGTTCTGGGAACAACAGCTGCTGCCACATCAGAACTTTCTTTCCTAGAATCATTTGCAATCTCTATTCTTCTACCACTCTTAGAAAGAACAGGGCCCACATCAGCAGCATCACTCCTAGAATCAGTAGCCAGCTCTGGTCCTGAGCTAGTTCTTGGTATTATCACAGGCACCACATCAATTTTGCTAAAATTCTGAAGACTAGAAGAGTTGTTACTCTTCAGTGAACCTCTCTTCAGGTTGGTGCCACTAGATGCAAAGGTTGAATTTCCAACTGTTTTGGTACTGGAGCCATTACCAGCTCTCTGAGGTGTGACTGGAACCAACCCGCTTGAAGTTGTTGATTTTGTCTCTTTCAATGCAGAGTCTGAATTTTGAGAAACTGATAATCTTCCTGTAGAAGACTTTATGTTATTCTCAGAATTTTGTAGAACTGATAACCGCCCAATAAGAGCCC]

[+] EMBL CB649701             [TCCTTTTTTTTTTTTTAATACTCCAAAGGGCATATCTCACTTACAAGCAAAGAAATGTTTCATCAAAACTCAGACATTAGCTGTTGTAGGGACGTGACAAGCCAACGAGTAACAAAGGTGTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAGAAAGAGGGACCAGCTGATACTGTTGAATGTATTACTGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB628782             [                                                                                       AGGGACGCCCCAAGCCAACGAGTAACAAAGGGGTTGATCAAGAGTATAAATCTCAAATACTATTCAAAAAAAAACTGATGTACAGGGGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAAACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAAAAAAGAGGCTACAGCCAGCAAGGCATTAC ATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAAAAACCAATGAAACAAACGCGAAAAACGCTGCCGGCAAATGTCACCGCTCATGGCAGCTTCCGTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAAAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAAACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CB656809             [                                                                                                                                          CTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAG AAGAGGGACCAGCTGATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTGAAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAACAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB649700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CTTGGAGCTCGGTGACTGGGCACGAACGANCAGCTCTCCATGGCAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAG AAGAGGGACCAGCTGATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTGAAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAACAGTACATAAATCTAGTGTGATTGTTTCACTTTTCTCCATCAGAACACTTGCAACATCAGCAGATACGGCATGATCAGACATCTTCTCCATTGCTGCAATAATGCCCCGTATATCATTTCTTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAAATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAGTTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAGAAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAGAAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF323940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCGTATATCATTTCTTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAAATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAGTTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAGAAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAGAAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCTTACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAAATCCCATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB656808             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTCCATCAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAGTTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAGAAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAGAAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCTTACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAAATCCCATCCTGTCAATCACAC CAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAGACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATCTGTTTCACTGTTTTTGCTCCCTGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTAGTTCACTATATCTTGATTGGACCCTAAACGGTGACATTCTTCCAGCAGAAATTTCTCTCCTAGAATCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAGCACTTTCTTTCCTTGAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAGGTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTACATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTGCCTGACTTGGGAACAATAGGTGCCGAGGCAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB656810             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATATCAGTTATGTCTTGGCTTACGCATTGTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAAATCCCATCCTGTCAATCACACACAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAGACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATATGTTTCTCTGTTTTTGCTCCGGGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTAGTTCACTATATCTTGATAGGACCATAAGCGGTGACATTCTTCCAGCAGAAATTTCTCTCCTAGAATacacg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB628781             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTCTCCTAGATTCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAGCACTTTCTTTCCTGNAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAGGTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTACATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTACCTGACTTGGGAACAATAGGTGCCGAGTCAGCGCTTACTTCCATTCTTAAGTTAGCTCTGGGACCAACAACAGGTGCTGAATCAGAGGCCATTTCTGTTCTAGAGTTTGTTCTGGGAACAACAGCTGCTGCCACATCAGAACTTTCTTTCCTAGAATCATTTGCAATCTCTATTCTTCTACCACTCTTAGAAAGAACAGGGCCCACATCAGCAGCATCACTCCTAGAATCAGTAGCCAGCTCTGGTCCTGAGCTAGTTCTTGGTATTATCACAGGCACCACATCAATTTTGCTAAAATTCTGAAGACTAGAAGAGTTGTTACTCTTCAGTGAACCTCTCTTCAGGTTGGTGCCACTAGATGCAAAGGTTGAATTTCCAACTGTTTTGGTACTGGAGCCATTACCAGCTCTCTGAGGTGTGACTGGAACCAACCCGCTTGAAGTTGTTGATTTTGTCTCTTTCAATGCAGAGTCTGAATTTTGAGAAACTGATAATCTTCCTGTAGAAGACTTTATGTTATTCTCAGAATTTTGTAGAACTGATAACCGCCCAATAAGAGCCC]




>consensus_11932#0
TCCTTTTTTTTTTTTTAATACTCCAAAGGGCATATCTCACTTACAAGCAAAGAAATGTTT
CATCAAAACTCAGACATTAGCTGTTGTAGGGACGTGACAAGCCAACGAGTAACAAAGGTG
TCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAA
GGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACA
ATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAA
GGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAA
CTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGC
TCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGT
GTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGG
AGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTG
CCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCA
ACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTT
TTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGT
TGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAGAAGAGGGACCAGCTG
ATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTG
AAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAA
CAGTACATAAATCTAGTGTGATTGTTTCACTTTTCTCCATCAGAACACTTGCAACATCAG
CAGATACGGCATGATCAGACATCTTCTCCATTGCTGCAATAATGCCCCGTATATCATTTC
TTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAA
ATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAG
TTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAG
AAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAG
AAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCT
TACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAA
ATCCCATCCTGTCAATCACACCAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAG
ACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATCTGTTTCAC
TGTTTTTGCTCCCTGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTA
GTTCACTATATCTTGATTGGACCCTAAACGGTGACATTCTTCCAGCAGAAATTTCTCTCC
TAGAATCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAG
CACTTTCTTTCCTTGAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAG
GTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTA
CATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTGCCTGACTTGGGAA
CAATAGGTGCCGAGGCAGCGCTTACTTCCATTCTTAAGTTAGCTCTGGGACCAACAACAG
GTGCTGAATCAGAGGCCATTTCTGTTCTAGAGTTTGTTCTGGGAACAACAGCTGCTGCCA
CATCAGAACTTTCTTTCCTAGAATCATTTGCAATCTCTATTCTTCTACCACTCTTAGAAA
GAACAGGGCCCACATCAGCAGCATCACTCCTAGAATCAGTAGCCAGCTCTGGTCCTGAGC
TAGTTCTTGGTATTATCACAGGCACCACATCAATTTTGCTAAAATTCTGAAGACTAGAAG
AGTTGTTACTCTTCAGTGAACCTCTCTTCAGGTTGGTGCCACTAGATGCAAAGGTTGAAT
TTCCAACTGTTTTGGTACTGGAGCCATTACCAGCTCTCTGAGGTGTGACTGGAACCAACC
CGCTTGAAGTTGTTGATTTTGTCTCTTTCAATGCAGAGTCTGAATTTTGAGAAACTGATA
ATCTTCCTGTAGAAGACTTTATGTTATTCTCAGAATTTTGTAGAACTGATAACCGCCCAA
TAAGAGCCC

consensusID : consensus_11932#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence

                              [TTTTTTTTTTTTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGNAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCNGGAAAGAAATGGNAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGGTCCCGCCTTTGC]

[-] EMBL AU055953             [TTTTTTTTTTTTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGNAACTGATGCCCAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTTTTCTTCNGGAAAGAAATGGNAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGTTGCAACGGTCCCGCCTTTGC]




>consensus_11932#1
TTTTTTTTTTTTCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTA
CAGGTGTACAAGGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATC
ACAACCAAACAATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCT
ACAGCCAGCAAGGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTA
TCAAGGGCAAACTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCA
GATGTCACCGCTCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCAC
TGTTGGTTAGTGTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTG
CTGTGCCTTGGAGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGNAACTGATGCC
CAACATTGGTGCCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGT
GTGGTCAGTCAACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGC
GACTGCCCCTTTTCTTCNGGAAAGAAATGGNAGCTTATTTTTGACCTTCTCCAATTCAAT
AAAGCATAGGTTGCAACGGTCCCGCCTTTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11932#0      TCCTTTTTTTTTTTTTAATACTCCAAAGGGCATATCTCACTTACAAGCAAAGAAATGTTT 60
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CATCAAAACTCAGACATTAGCTGTTGTAGGGACGTGACAAGCCAACGAGTAACAAAGGTG 120
consensus_11932#1      -------------------------------------------------TTTTTTTTTTT 11
                                                                        *        * 

consensus_11932#0      TCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAA 180
consensus_11932#1      TCGATCAAGAGTATAGATCTCAAATACTATTCAAAAGAAAACTGATGTACAGGTGTACAA 71
                       ************************************************************

consensus_11932#0      GGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACA 240
consensus_11932#1      GGAGCTCAATCACTCTTCATCAATCTTGTCATTGAATCGACCAGACATCACAACCAAACA 131
                       ************************************************************

consensus_11932#0      ATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAA 300
consensus_11932#1      ATAAACTATCAAATGCAACCCGCTAACACAAGACACGAGAGAAGAGGCTACAGCCAGCAA 191
                       ************************************************************

consensus_11932#0      GGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAA 360
consensus_11932#1      GGCATTACAATCGCTGACATTCGCTCCATCTCACGGTCATCCACATCTATCAAGGGCAAA 251
                       ************************************************************

consensus_11932#0      CTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGC 420
consensus_11932#1      CTGGTATCTTCAGAAACCAATGAGACAAACGCGAAGAACGCTGCCGGCAGATGTCACCGC 311
                       ************************************************************

consensus_11932#0      TCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGT 480
consensus_11932#1      TCATGGCAGCTTCCCTTCAAAAGTGACAACAGACAAGGATCTCGAGCACTGTTGGTTAGT 371
                       ************************************************************

consensus_11932#0      GTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGG 540
consensus_11932#1      GTGTGTACAAGAGGAACAAACAGTGGCAACAAAATGTTATCCACTGCTGCTGTGCCTTGG 431
                       ************************************************************

consensus_11932#0      AGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGCAACTGATGCCCAACATTGGTG 600
consensus_11932#1      AGCTCGGTGACTGGGCACGAACGAACAGCTCTCCATGGNAACTGATGCCCAACATTGGTG 491
                       ************************************** *********************

consensus_11932#0      CCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCA 660
consensus_11932#1      CCATCAGCGGGAATGCATTTCCCATTCAGTTGTGTATGTATGACAGTGTGTGGTCAGTCA 551
                       ************************************************************

consensus_11932#0      ACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTT 720
consensus_11932#1      ACTACATAACTTCCTGGAAGACAAGACTGAGCTCCTGTGCCGTGTTTGCGACTGCCCCTT 611
                       ************************************************************

consensus_11932#0      TTCTTCTGGAAAGAAATGGAAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGT 780
consensus_11932#1      TTCTTCNGGAAAGAAATGGNAGCTTATTTTTGACCTTCTCCAATTCAATAAAGCATAGGT 671
                       ****** ************ ****************************************

consensus_11932#0      TGCAACGCTCCCGCCTTTGCTCTGCTTGCAGATCTACACCAACAGAAGAGGGACCAGCTG 840
consensus_11932#1      TGCAACGGTCCCGCCTTTGC---------------------------------------- 691
                       ******* ************                                        

consensus_11932#0      ATACTGTTGAATGTATTACTGATCCAAACGTCCTGACAAGCTTCACCAACAATTCCAGTG 900
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      AAACACCTAAGTGCCTGTCAGTTTTACTCTCCAGAAGGTCAGTAAGGACGGGCAGAATAA 960
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CAGTACATAAATCTAGTGTGATTGTTTCACTTTTCTCCATCAGAACACTTGCAACATCAG 1020
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CAGATACGGCATGATCAGACATCTTCTCCATTGCTGCAATAATGCCCCGTATATCATTTC 1080
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TTTGCCACATTTGATGAACAATCTGCAATTTTGTCAACCGAGATCGAGTTGAGCTTAGAA 1140
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      ATAGCTCATGCTGCTCCATTAGAACAGATAGAACATCCTCATCACTTGCTATCGTTGGAG 1200
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TTTCAGCAGCTTGACTGCTTCCTCTAGATGAATATAATCGGCCTGTAGGAGCCATCGAAG 1260
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      AAGAATTGCTTGTTGTCGGTTCTTCATTACCAGGTGACTGATCTCTGCTTTCCCAATTAG 1320
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      AAGCAGTTGGCCTTGTTCTTCCTGCTCTTGAAACTTCAATATAGCAGTTATCTCTTGGCT 1380
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TACGCATTCTAGAAACATAATTCTCACTGCGGTGTGTATTTGGTTCAGCAGAACTTGGAA 1440
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      ATCCCATCCTGTCAATCACACCAGGTTTTGCATCTTCCCGGGTTTCTTCAGAAATTCCAG 1500
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      ACTGAACAACACCATTCCTCCGAGGAAGGTATATTTGACAAGTAAAATCATCTGTTTCAC 1560
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TGTTTTTGCTCCCTGCATCAACTTTATCTGCATCAGCTTTGGCATTATTTAACTTTCGTA 1620
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      GTTCACTATATCTTGATTGGACCCTAAACGGTGACATTCTTCCAGCAGAAATTTCTCTCC 1680
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TAGAATCCGGAGCCATTTCCATTCTAGAAGTTGTTCTGGGAACAACAGGTGCCACATCAG 1740
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CACTTTCTTTCCTTGAATCAGTAGCAGACTCTACCCTTCTGCCTGCCTTAGAAAGAAGAG 1800
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      GTGCAGAATCTGGGGCCACTTCCATCCGTGAACTAGTCTTCGGAGCAGCAGCAGATGCTA 1860
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CATCAGTACTTTCTTTCCTAGATTCAACAGAAGACTCTAACCTTCTGCCTGACTTGGGAA 1920
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CAATAGGTGCCGAGGCAGCGCTTACTTCCATTCTTAAGTTAGCTCTGGGACCAACAACAG 1980
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      GTGCTGAATCAGAGGCCATTTCTGTTCTAGAGTTTGTTCTGGGAACAACAGCTGCTGCCA 2040
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CATCAGAACTTTCTTTCCTAGAATCATTTGCAATCTCTATTCTTCTACCACTCTTAGAAA 2100
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      GAACAGGGCCCACATCAGCAGCATCACTCCTAGAATCAGTAGCCAGCTCTGGTCCTGAGC 2160
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TAGTTCTTGGTATTATCACAGGCACCACATCAATTTTGCTAAAATTCTGAAGACTAGAAG 2220
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      AGTTGTTACTCTTCAGTGAACCTCTCTTCAGGTTGGTGCCACTAGATGCAAAGGTTGAAT 2280
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TTCCAACTGTTTTGGTACTGGAGCCATTACCAGCTCTCTGAGGTGTGACTGGAACCAACC 2340
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      CGCTTGAAGTTGTTGATTTTGTCTCTTTCAATGCAGAGTCTGAATTTTGAGAAACTGATA 2400
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      ATCTTCCTGTAGAAGACTTTATGTTATTCTCAGAATTTTGTAGAACTGATAACCGCCCAA 2460
consensus_11932#1      ------------------------------------------------------------
                                                                                   

consensus_11932#0      TAAGAGCCC 2469
consensus_11932#1      ---------