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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12090#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1899 fasta sequence
[GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG-AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA-GTA-GCTGCCTTGC-AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTCTGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT]
[+] EMBL AK101489 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGATTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTCTGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT]
[+] EMBL AK107295 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTCGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGTAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTGGATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGTGAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGTTCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCTTTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAAAACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACAATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTACTCTTAATCATACACG ]
[+] EMBL AK060860 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCA GTA GCTGCCTTGC AAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAAC ]
[+] EMBL CA754884 [GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTTGAGGCATCTG ]
[+] EMBL CF309963 [ GGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAA CAT ]
[+] EMBL CF312706 [ GGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTG AAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAAGCTG ]
[-] EMBL CA752884 [ CCCAAATATCGTCGGAGTTAAGAAGACAACTTCCAGTAGATCTGGCTGAAAGGGAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAGGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGGAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGGTAGGCTGCCTTGCAAAGCGTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCAACATCAAGGAGCCCCACTCCTTTCGGAAC ]
consensusID : consensus_12090#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1458 fasta sequence
[GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAA-ATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCC-ATGCAACTCCTC-CAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCG-CCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAGAAATAAAAAATATAAAACATTTAAAA]
[+] EMBL AK064991 [GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCGCGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCGGCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCAGTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGGACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTGTCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCCAGGTCATACGGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTTGATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAAATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCTCTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGCCCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCATCAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAA ATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCC ATGCAACTCCTC CAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCG CCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAGAAATAAAAAATATAAAACATTTAAAA]
[+] EMBL CA754837 [ GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTCTCCCAGGCGCTCGCCGGTCGCCTCGACGAGGC ]
[-] EMBL CF312707 [ GGAAAAAGCATTTATTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTGATTCTAGACGAGGGAAACACAGAGAANATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCTTCAGAAGAATTTCTGAAAGAAATCAAAAGGGCTTCTGAAGCTTTCCAAATCAACTCCTCNCAACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAAGATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGAACACCGCCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTGCGATCTTCCTCCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAATGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGTACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAGGCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCTTTGCCAAAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12090#0 -GCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTC 59
consensus_12090#1 GGCGTCGGCGACGTGGTCGTGTTCCTCCCGGGGCTCCGGGTGCCGAGGAGCGTGGACTTC 60
***********************************************************
consensus_12090#0 TCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCG 119
consensus_12090#1 TCCCAGGCGCTCGCCGGTCGCCTCGACGAGGCCTCGTCGAGGCTGTCGTCGCTGCGGGCG 120
************************************************************
consensus_12090#0 CGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCG 179
consensus_12090#1 CGGGTCGTCGACATGGCAATGCAAGAATCGGCGGCGGCGCTGAAGCCGAAGCGGCGGGCG 180
************************************************************
consensus_12090#0 GCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCA 239
consensus_12090#1 GCGGCGCGGCACGGTTCGAGCACTGCTAATCTCCTACAGGCTCTGGAAGACTATCTGCCA 240
************************************************************
consensus_12090#0 GTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGG 299
consensus_12090#1 GTGCTGCTAGGATTGGTGAAGGAAGGTAGCGAATTGCGGCACGGAGTGCACTTCGTCTGG 300
************************************************************
consensus_12090#0 ACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTG 359
consensus_12090#1 ACTAACCAAGAGGATAATGCTGAGGAAACGGCCATGGCAGATGCATGGTATGAAGTGTTG 360
************************************************************
consensus_12090#0 TCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCC 419
consensus_12090#1 TCCGTTCTGCATTTGATGGCCATGGTCTGCTTGTTGCAGGCCAATTCTCTGCTTCTTCCC 420
************************************************************
consensus_12090#0 AGGTCATACGGTGATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTT 479
consensus_12090#1 AGGTCATACGG--ATGGTTATGCGCCAAGGGTTTCTGAAGAGAGCAGACGAGCTACTGTT 478
*********** ***********************************************
consensus_12090#0 GATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAA 539
consensus_12090#1 GATGTTTTCTTGAAGGCATCTGGCTACCTAGACTGCGCAATTAGACAAGTACTACCCCAA 538
************************************************************
consensus_12090#0 ATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCT 599
consensus_12090#1 ATATCGTCGGAGTTAAGGAGACAACTTCCAGTAGATCTGGCTGAAGGAAATCTCAAAGCT 598
************************************************************
consensus_12090#0 CTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGC 659
consensus_12090#1 CTTAGCCTGCAAGCTCTGGGTCAGGGAGTCGACATGCAACTTGGTCTGGCAATTGATAGC 658
************************************************************
consensus_12090#0 CCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCAT 719
consensus_12090#1 CCAAAGGCCACTCTAGCGGTAAAACGGCGCTTAGCTTGCGAGATGGTCAAATATTGGCAT 718
************************************************************
consensus_12090#0 CAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCCGATGGATGGGGGAAAAAGCATTTA 779
consensus_12090#1 CAAATTCAGGAGAGCATTCCAGAAATTCCGGTATCAGATGGATGGGGGAAAAAGCATTTA 778
*********************************** ************************
consensus_12090#0 TTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTG 839
consensus_12090#1 TTGTTTGTTAAGTGGAAGTATGTTGAAGCAAAGGCTGCAGCATACTATTTCCATGGTTTG 838
************************************************************
consensus_12090#0 ATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCT 899
consensus_12090#1 ATTCTAGACGAGGGAAACACAGAGAAATCTCATGGAATGGCAGTAGCTGCCTTGCAAGCT 898
************************************************************
consensus_12090#0 TCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCA 959
consensus_12090#1 TCAGAAGAATTTCTGAAAGAAAGCAAAAGGGCTTCTGAAGCCTTCCATGCAACTCCTCCA 958
************************************************************
consensus_12090#0 ACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAA 1019
consensus_12090#1 ACATCAAGGAGCCCCACTCCTTTCGGAACAGCTAAGTACATGCTTGACAAGATTCCAAAA 1018
************************************************************
consensus_12090#0 GATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGA 1079
consensus_12090#1 GATGCTTCAAGCAAGGTCAAGATCAATCAGGACCTGTATACGCAAGAGAGGGTCATTGGA 1078
************************************************************
consensus_12090#0 ACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCT 1139
consensus_12090#1 ACACCGCCTCCATTGCCGGATTTTGCGTTGGCTCTAAAACCTGACGACTACGATCTTCCT 1138
************************************************************
consensus_12090#0 CCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAA 1199
consensus_12090#1 CCATTAGATCCACTTTGGAACAAAGAAGACAGCCGTCAGTAGCAGTATATTCAGCAAGAA 1198
************************************************************
consensus_12090#0 TGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGT 1259
consensus_12090#1 TGTGAATGTTGTCTTTCAGAGGTTCAGGCTCTAGTATACCATGTCGAAGCCAGACGTGGT 1258
************************************************************
consensus_12090#0 ACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAG 1319
consensus_12090#1 ACGAATGAAGTGTACAAAATTTGTCCCAACAAATTGTGGTGTCAGCAAAATTTAAACAAG 1318
************************************************************
consensus_12090#0 GCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCT 1379
consensus_12090#1 GCCTGGAGATAATCTCAAGAGCATTGTACAGGCGAATCTTATTCTGACAAAGGAAATGCT 1378
************************************************************
consensus_12090#0 TTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCAATATGACTCGTG 1439
consensus_12090#1 TTGCCAAAAAAAAAAGAAGAAAAAAACTAACCATTTCAAAAGATTCCNAAAAAG-----A 1433
*********************************************** * *
consensus_12090#0 GATCCATTTTCTCAGGATTCCCTTCAGAATGGCTTGGTTTTGATCTATACTGAGTACTGT 1499
consensus_12090#1 AATAAAAAATATAAAA----CATTTAAAA------------------------------- 1458
** * * * * * ** * **
consensus_12090#0 GAAAACTGTCACATTTTGATCCTGCTGCAGCGACTATATCATCTAGACAGTTTCCAGTGT 1559
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 TCTGAGATACAACTACACAAGCGAACAAAACGAAACTTGACACGCTCGTTTCAAAAGCCT 1619
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 TTGTCTGATGTTCTACAATCGGTCCAAAAGGCAAGTATGCGTGCCAAATAACACAAAGAA 1679
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 AACCACGCGAAATGGCGCATATATAGTTTGCCTACTGCCGTGAGCACATATATGGCTACA 1739
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 ATTTACAGACTCCAAATTATAAAGAAACATCATTATTGTATTATGTTATTTACATGTTAC 1799
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 TCTTAATCATACACGATTGCTGTTTACATCAATTCTATTCTTTACCACTAGGTTTGTTTC 1859
consensus_12090#1 ------------------------------------------------------------
consensus_12090#0 TGTTCAATAATATTGCTATCAGGTATTCAGGCAGGAACAT 1899
consensus_12090#1 ----------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||