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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12096#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 3224 fasta sequence
[TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT-GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAACCATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG]
[+] EMBL AK068556 [TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAA ]
[+] EMBL AK121880 [ CACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAAGACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTCGACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACGCTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTGGACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCACAAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAGGTT GCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGATATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAAGTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGCCGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTTGATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCTCAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTTATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATTCGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCA ]
[+] EMBL CB643478 [ GCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTGGCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTCCTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTCCGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTGGCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCATGCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGCCTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCCGAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATCCTCGATGCCATGGACGCCTGC ]
[+] EMBL CB640735 [ CCCTTCGAGGAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGTGGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCCGACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGGCGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAAGTCCACGACGTGGCCCCCGACCTTCCCGCCCACCACCGCG ]
[+] EMBL CB628383 [ AAGGTTCTTATCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGCAGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAGGTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAGGTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAATGTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAAGATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCANGAAAAACTCATGAACAGGCTGAGACTGATGCTTtgt ]
[-] EMBL CB642506 [ CGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTCGAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATGTTAAGATGTGGATGGTGAAGAGTGATGAATGTAAAAaaaaga ]
[-] EMBL CB628384 [ GAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAACCATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG]
[-] EMBL CB643479 [ TATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAGATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGACAAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATAATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGCAGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTTCCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAA ]
[-] EMBL CB639079 [ CCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGATGAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTGAGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACAGATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCAGC TACGGAAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCAAGCATGCTCAAGGAATTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTTGAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGATGGTGAAGAGTGATGAATGTACA ]
consensusID : consensus_12096#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 595 fasta sequence
[CTTGTTTTTAACAAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTT]
[+] EMBL CB664077 [CTTGTTTTTAACAAGGTCATGCGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAGAACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATGAGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTTGCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAATGTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACCATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTGGAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTGTCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCTGCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGACAGTGATCAGCATGTACTTGATGTATGGAAACCTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12096#0 TCCTCCTCACTCGGAAAGGAAAAGAGCGCCGCCGCCGCCGGCGTGATGCTTCCCTTCGAG 60
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GAGCAGGTGGTGGCGGACCTCCTGGAGGACCCCAACGGCGGCCTGGTGGTGGTTTCGTGT 120
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GGCCTCCCGGTGGCCTCCCTGGCGTCCGCCGTCCTCCTCCAGCTCTTCCACCAATCCCCC 180
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GACGATGGCTGCTTCCTGATCCTCTCCGCCCCCGAGCCGGTCAAAGCTCAAATCCGGCGG 240
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CGCCTCCTCCTCAACTCCCAGAGCCAGCCTCCTCTCTTGCAGCTGCAGGTCCACGACGTG 300
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GCCCCCGACCTCCCCGCCCACCACCGCGTCGCCCTCTACGCCTCCCGCGCCGCGCTCTTC 360
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CTCTCCCCCCGCGCCCTCGTCGCCGACTTCCTCACCTCCCGCCTCCTCCCCTCCCGCGTC 420
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CGCGCCCTCCTCCTCCTCTCCGCCCACCGCTCCTCCGACACCTCCTCCGACGCCTTCGTG 480
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GCTCGCCTCCTCCGCCACCACCACCTCCTCCCTGTTTATGCCTTCTCCGATCGCCCCCAT 540
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GCCATGGTCTCCGGCTTCGCCAAGGCGGAGCGCGCTATGAAGAGCCTCTACATTCGACGC 600
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CTCCACCTTTGGCCCCGCTTCCACCTTCTTGCTGCCGCTGACCTCGAGCGCTCCCCGCCC 660
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GAGGTCATCGACGTCCGCGTCCCCATGACTCAGCCTATGAGGGGCATCCAGGCCGCTATC 720
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CTCGATGCCATGGACGCCTGCCTCAAGGAGCTCAGGCGGACCAACAAGGTCGACGTCGAA 780
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GACCTCACCGTCGACAAGGGCCTCTTCAAGTCTTTTGATGAGATCGTCAGGAGGCAGCTC 840
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GACCCCATCTGGCACACGCTCGGCAAGAAGACCAAGCAGCTCGTCGCCGACCTCAGGACG 900
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CTACGCAAGCTGCTTGATTATCTTGTCAGGTACGATGCTGTGACATACCTTAAGTACCTG 960
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GACACACTCAGAGTATCTGAAGGCGTCCGATCTGTTTGGATATTTGCTGACTCAAGCCAC 1020
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 AAGATATTCGACCTTTCAAAAAGGCGTGTCTACCAGGTTGTGAGAGCAGACGGTACAAAG 1080
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GTTGCAGCAGACAACAAGGGCACACCAACAAAGAAGAGGAAGGTGGCACGCGCTAGCAGC 1140
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 AGGAAAGGAAAAGAAACTGAAAATGAGGGTTCCAGTGATAACAAGGACAATACTCAGAAG 1200
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GTTAATGCAGAGATGGGCATTGTAGTGGAGGAGATTTTAGAGGAAGCACCTAAATGGAAG 1260
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GTTTTACGGGAACTATTGCAGGAGATAGCAGAAGAACAGGCAAAGGGAGATGGTGACAAT 1320
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GTAAACCCTGTTCATGAAGACGGAATTAACGAGAGTGGCATAGTTTTGGTAGCATGCAAA 1380
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GATGAGCGCTCATGCGTGCAGCTGCAAGAATGCATATCAAAAGGCTCGCATCAGGTCATG 1440
consensus_12096#1 ---------------------------------------CTTGTTTTTAACAAGGTCATG 21
* * * ********
consensus_12096#0 CGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAG 1500
consensus_12096#1 CGGGCCGAGTGGGAGAAGTACTTGCTTGGCAAAGCTGAACTGCATGGATTGCATAGGAAG 81
************************************************************
consensus_12096#0 AACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATG 1560
consensus_12096#1 AACAAGAAAACATCTCAGCAACTAAAAGGGTTTGGTGTTCTGGATGGGGAAGTTCCTATG 141
************************************************************
consensus_12096#0 AGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTT 1620
consensus_12096#1 AGGTCTGGTGAGAGTGCAGGTCCTGTTAGCATTAGCAAGGTTGAGGCTAATGCCTTACTT 201
************************************************************
consensus_12096#0 GCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAAT 1680
consensus_12096#1 GCGGCTGCCTCTGAAATAAGCACTGTAACTAAGGAAGCAAATCTTGCTGATGATTCAAAT 261
************************************************************
consensus_12096#0 GTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACC 1740
consensus_12096#1 GTCAGCTGCAAGAAGAGATCATTCGGAAAAGGGAAAGGGAAAGGGAAATTTAAGAAAACC 321
************************************************************
consensus_12096#0 ATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTG 1800
consensus_12096#1 ATGGCAAAGAGAGAAGCCAGTAAGTTGAGAAACAGAAATACTACAGAACATACTGATTTG 381
************************************************************
consensus_12096#0 GAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTG 1860
consensus_12096#1 GAAGTTGAAGGTCAATCAGGAAAAACAGATGAACAGGCTGAGACTGATGCTTGTAAGTTG 441
************************************************************
consensus_12096#0 TCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCT 1920
consensus_12096#1 TCTGCAGAAGATGATTCTGCATCAGCTCCAGCTGTTGACAAAGCTGCTAACAATTTATCT 501
************************************************************
consensus_12096#0 GCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGAC 1980
consensus_12096#1 GCTTTTGGAGACTCTGTGGATACCGAACCACTACCTCCTGTGCAATTTTACGCCCTAGAC 561
************************************************************
consensus_12096#0 AGTGATCAGCATGTACTTGATGTATGGAAACCTTCTGTAATTATCGTTTATCATCCAGAT 2040
consensus_12096#1 AGTGATCAGCATGTACTTGATGTATGGAAACCTT-------------------------- 595
**********************************
consensus_12096#0 ATAACATTTGTTAGAGAAATTGAAGTATACAAGGCAGAAAATCCATCGATGAAGTTAAAA 2100
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GTTTACTTTCTTTTTTATGAAGATTCTGCCGAGGTACAAAAATTTGAGTCCAGCATTCGC 2160
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CGGGAAAATGAAGCATTTGAATCTTTGATCAGACAGAAGTCGCTGATGATGATACCTGTT 2220
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GATCAGAATGGCCGTTGCATTGGACCAACTCTTGCAAATGAACCAGAAGCTCTTTTATCT 2280
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CAAAATTCACTAACAAGAAAGGCAGGTGGTAGAAAGCCACTAGAGAAGGAGATGCAGGTT 2340
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 ATTGTGGACATGAGAGAATTCATGAGCAGTCTTCCTAATGTATTGCACCAGAAAGGTATT 2400
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CGAATAATACCTGTTACCTTGGAAGTCGGTGACTATGTTCTTTCTCCTTTGATCTGTGTC 2460
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GAACGAAAAAGTATTGCGGACTTGTTCCAAAGCTTTGCTTCTGGTCGTCTCTACAATCAG 2520
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 ATTGAAACCATGGTTCGGTATTACAAGATCCCAGTGCTTCTGATAGAATTCTCACAAGAC 2580
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 AAGAGCTTTTCCTTTCAGTCTGCAAGTGAAATTGGGGATGATGTATCTCCGACAAATATA 2640
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 ATCTCAAAACTTTCATTACTAGTCCTGCATTTTCCTCGGCTTCGCATAGTCTGGTCTCGC 2700
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 AGCTTGCATGCCACGGCAGATATATTCCTATCACTCAAAACAAACCAGGATGAACCTGAT 2760
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GAGAGCAAGGCAATGAGAGTTGGTGTGCCCTCTGAGGACGGAGTTGTGGAGAATGACGTG 2820
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 AGGGCTGAAAATTACAATACGTCCGCGATTGAATTCTTGAGGAGGCTTCCTGGTGTGACA 2880
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GATTCAAACTATAGAAGAATAATGGAGGAATGCAATAGCTTAGCAGAGCTGGCCCTGCTT 2940
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CCGGTAGAGCGGCTGTCTGAGTTGATGGGTACTCAGAAAGGGGCACGCATGCTCAAGGAA 3000
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 TTTCTCGATGCCAAGTGTCCAACTATGCTCTAGGGCTGTGTAATCTTGTTTGTAATTGTT 3060
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GAAAATGATCAATAATGAACTTATTATTCTACTTAGTAAAACCGATTTTAAGATGTGGAT 3120
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 GGTGAAGAGTGATGAATGTACAACCCTTACTAGAAAGCTTGGGTCACTCGGTCGCTAAAC 3180
consensus_12096#1 ------------------------------------------------------------
consensus_12096#0 CATCTTGCATATGGTGCTGATGTCACAATTTATTTACGAGGCGG 3224
consensus_12096#1 --------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||