cluster # 1219

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Oryza sativa
cluster # 1219 cluster # 1219 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1219#0 length = 651 sequences # 2

consensusID : consensus_1219#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 651
fasta sequence

                              [AGAAGTTGCCNAANAAACATGCGCCAGAANCGCCCCNATCCCCTACTGGATNCCGNATNCGGACCGACAACACCATCAGGTATANACCGAAGCGNAGGNACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGNNGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTCCCCTTACCAAACGTTTTTTTTAAAAAAAGGGGAAAATCCCGGCCCAAAAAAAAAAATCCCCCTAAAAGGAAGTGTAAAAAAAATAAAGGGCCCGGTTTTAAAAAACTTGGAAATGGAAAAAACCTGGGGTTACCCAAATAAAACCCCTTGAAAAAAAACCCCCTTTTCCCAAGTGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCA]

[+] EMBL AU093349             [AGAAGTTGCCNAANAAACATGCGCCAGAANCGCCCCNATCCCCTACTGGATNCCGNATNCGGACCGACAACACCATCAGGTATANACCGAAGCGNAGGNACTGGCGCCGCACCAAGCTTGGGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCAGTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATGTTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGNNGTTAAAAAA                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF330303             [                                                                                                                                                                                                                                                                    GTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAGAACCATTCTAATATATCTGCCTTGTTGAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCTTGTTTCCCCTTACCAAACGTTTTTTTTAAAAAAAGGGGAAAATCCCGGCCCAAAAAAAAAAATCCCCCTAAAAGGAAGTGTAAAAAAAATAAAGGGCCCGGTTTTAAAAAACTTGGAAATGGAAAAAACCTGGGGTTACCCAAATAAAACCCCTTGAAAAAAAACCCCCTTTTCCCAAGTGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCA]




>consensus_1219#0
AGAAGTTGCCNAANAAACATGCGCCAGAANCGCCCCNATCCCCTACTGGATNCCGNATNC
GGACCGACAACACCATCAGGTATANACCGAAGCGNAGGNACTGGCGCCGCACCAAGCTTG
GGTTCTGAGCAGGAGGTGGCACCGGCTGCTGCCTGCGGATTTTGTTTTATGGATGTTTCA
GTGTTTATGCAAGCTTAGGATGTGATTCCATGATGCTTTTTATTAAGGTTTTCTGAAATG
TTAAGGGTAGTAGTACTCTGGTTTACTGAGGATACCATGCTATGCTGTGCTGAGTAAAAG
AACCATTCTAATATATCTGCCTTGTTGNNGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAACCCTTGTTTCCCCTTACCAAACGTTTTTTTTAAAAAAAGGGGAAAATCCCGG
CCCAAAAAAAAAAATCCCCCTAAAAGGAAGTGTAAAAAAAATAAAGGGCCCGGTTTTAAA
AAACTTGGAAATGGAAAAAACCTGGGGTTACCCAAATAAAACCCCTTGAAAAAAAACCCC
CTTTTCCCAAGTGGGGAAAAAAAAAAAAAGCCCCAACCAAATCCCCTTTCA

clustalw multiple alignements is not computed in this case