cluster # 12209

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Oryza sativa
cluster # 12209 cluster # 12209 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12209#0 length = 1527 sequences # 8

consensus_12209#1 length = 802 sequences # 1
consensus_12209#2 length = 724 sequences # 1

consensusID : consensus_12209#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1527
fasta sequence

                              [TGGTTCCGGAACCCAAACAAATCTGCCGGTTCTCCCACTTCGTACGCCGCCTCGCCGGAAGGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGACGGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGAGGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGCGGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCTCCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTGCGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGCGCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCCGTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAGGCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAGGTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCCCCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACACCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGA-TTGACCAATTAGCCAGCTT-AGAACACTCTACACCAGACACTGCATCAGAGGAATGTA-TTGAACCTGCT-ATG-C-TTGTCC-TTAACTCAACTGCTCTTTTGACAAGGGAACAT-CGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTTTACCCTATGGGAATACTATGAATTATTGCCTTAAAACATTAGTATTTCAGGATTTTAATGAATTGGTGAGACGAATTTTCATTCAAAAA]

[+] EMBL AU183901             [TGGTTCCGGAACCCAAACAAATCTGCCGGTTCTCCCACTTCGTACGCCGCCTCGCCGGAAGGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGACGGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGAGGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGCGGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCTCCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTGCGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGCGCGCTCCGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AK106156             [                 CAAATCTGCCGGTTCTCCCACTTCGTACGCCGCCTCGCCGGAAGGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGACGGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGAGGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGCGGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCTCCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTGCGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGCGCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCCGTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAGGCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAGGTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCCCCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACACCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGA TTGACCAATTAGCCAGCTT AGAACACTCTACACCAGACACTGCATCAGAGGAATGTA TTGAACCTGCT ATG C TTGTCC TTAACTCAACTGCTCTTTTGACAAGGGAACAT CGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACAT                                                                                                                      ]
[+] EMBL CB653145             [                                 CCCACTTCGTACGCCGCCTCGCCGGAAGGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGACGGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGAGGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGCGGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCTCCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTGCGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGCGCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCCGTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAGGCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAGGTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCCCCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGGTCTACACCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGA TTGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB673069             [                                                               GAAGAGGAACTATCCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGACGGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGAGGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGCGGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCTCCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTGCGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGCGCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCCGTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAGGCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAGGTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCCCCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACACCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGA TTGACCAATTAGCCAGCTT AGAACACTCTACACCAGACACTGCATCAGAGGAATGTA TTGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C72688               [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCCGTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAGGCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAGGTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCCCCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACACCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGATTTGACCAATTAGCCAGCTTAAGAACACTCTACANCAGA ACTGCATCAGAGGAATGTATTTGAACCTGCTAATGCC TTGTCC TTnaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU101164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ctTGCT ATG CTTTGTCCTTTAACTCAACTGCTCTTTTGACAAGGNAACATACGGAATGTNCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGT CTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTTTACCCTATGGGAATACTATGAATTATTGCCTTAAAACATTAGTATTTCAGGATTTTAATGAATTGGTGAGACGAATTTTCATTCAAAAA]
[+] EMBL CA764601             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTAGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATA   TCTAGTCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTTTACCCTATGGGAATACTATGAATTATTGCCTTAAAACATTAGTATTTCAGGATTTTAATGAATTGGTGAGACGAATTTTCA        ]
[+] EMBL AU183900             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        tnTCCTGGAGTGATGAAGTGGGTCATGGAAACCNCCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTTTAaaaaaaaa                                                                               ]




>consensus_12209#0
TGGTTCCGGAACCCAAACAAATCTGCCGGTTCTCCCACTTCGTACGCCGCCTCGCCGGAA
GGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGAC
GGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGA
GGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGC
GGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCT
CCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTG
CGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGC
GCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCC
GTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAG
GCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAG
GTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCC
CCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACA
CCATCTGATATTAAGATTGAGGATTCTACTCCATCTGATGTTAAGATTGACCAATTAGCC
AGCTTAGAACACTCTACACCAGACACTGCATCAGAGGAATGTATTGAACCTGCTATGCTT
GTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCAC
CTATTGCAAGTAGATTCTTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCT
GTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGAT
GCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTC
ATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAAC
ATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCC
TTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAA
AAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTT
TTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAA
GAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTTTA
CCCTATGGGAATACTATGAATTATTGCCTTAAAACATTAGTATTTCAGGATTTTAATGAA
TTGGTGAGACGAATTTTCATTCAAAAA

consensusID : consensus_12209#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 802
fasta sequence

                              [AATGTATTGAACCTGCTATGCTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGGTGAATGTGGGTTTGATTCAGTTCCTATTTATGTATAGCAATGATGAACTTGTTTGTTTGGTAGCACCAAATATTATTTTCCAGAGATGACCTATTATTCTTTCGGTCTTTGCCTAACATTCATCTCCCAACATGCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTATGCCCTATGGGAATACTATGAATTATTGCCTTAAAAAAAAAGG]

[-] EMBL CB673070             [AATGTATTGAACCTGCTATGCTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGGTGAATGTGGGTTTGATTCAGTTCCTATTTATGTATAGCAATGATGAACTTGTTTGTTTGGTAGCACCAAATATTATTTTCCAGAGATGACCTATTATTCTTTCGGTCTTTGCCTAACATTCATCTCCCAACATGCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTATGCCCTATGGGAATACTATGAATTATTGCCTTAAAAAAAAAGG]




>consensus_12209#1
AATGTATTGAACCTGCTATGCTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATC
GGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTCTTCTGTCCAGGTGAATGTGG
GTTTGATTCAGTTCCTATTTATGTATAGCAATGATGAACTTGTTTGTTTGGTAGCACCAA
ATATTATTTTCCAGAGATGACCTATTATTCTTTCGGTCTTTGCCTAACATTCATCTCCCA
ACATGCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGA
AAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCA
ATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAA
AGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGA
GTGAGGACTATGATTTGTATGACGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTCG
TCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTCGACTTCACAT
TTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTCGAATGG
GTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATT
GCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGTATGCCCTATGGGAATACTATGA
ATTATTGCCTTAAAAAAAAAGG

consensusID : consensus_12209#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 724
fasta sequence

                              [TTAGAACACTCTACACCAGACACTGCATCAGAGGAATGTATTGAGCCTGGTATGCTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTATTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTATCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGTCGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTGGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTGGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTAGAATGGGTTAAGATCATGGATGGTATCATTATTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTTTTATATGTTTTCCCTATGGGAATACTATGAATTAGGGCCTTAAAACATTAGTATTTCAGGATTTTATGCAAAAAAGGA]

[-] EMBL CB653146             [TTAGAACACTCTACACCAGACACTGCATCAGAGGAATGTATTGAGCCTGGTATGCTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCACCTATTGCAAGTAGATTATTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTATCCTGGAGTGATGAAGTGGGTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGTCGATACAGTGAGAATGTCCTTCATGCTCGCAGTGTTGGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAATTCGTGGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTAAATTCTTGTAGAATGGGTTAAGATCATGGATGGTATCATTATTAGTTGTCAGTTCAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTTTTATATGTTTTCCCTATGGGAATACTATGAATTAGGGCCTTAAAACATTAGTATTTCAGGATTTTATGCAAAAAAGGA]




>consensus_12209#2
TTAGAACACTCTACACCAGACACTGCATCAGAGGAATGTATTGAGCCTGGTATGCTTGTC
CTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTCCACCTA
TTGCAAGTAGATTATTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAGTCTGTA
TGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAGGATGCT
AAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTATCCTGGAGTGATGAAGTGGGTCATG
GAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTGAACATG
CTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGTCGATACAGTGAGAATGTCCTTC
ATGCTCGCAGTGTTGGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGCCAAAAA
TTCGTGGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGCCTTTTA
AATTCTTGTAGAATGGGTTAAGATCATGGATGGTATCATTATTAGTTGTCAGTTCAAGAA
CTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTTTTATATGTTTTCCC
TATGGGAATACTATGAATTAGGGCCTTAAAACATTAGTATTTCAGGATTTTATGCAAAAA
AGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12209#0      TGGTTCCGGAACCCAAACAAATCTGCCGGTTCTCCCACTTCGTACGCCGCCTCGCCGGAA 60
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GGCGAAGAGGAACAAACCGCGGCGGGGGAGGCAGAGGAGCATCAGCTGCGAGCCGGCGAC 120
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GGCGAGGCCCCTGCCATGGTTGTCCACGTGGTGTACAGGAGGAGGGAGAGCTCTTGGAGA 180
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GGGGGCGAGACGTCCGCGAGGCTCCACCAGGGCGCCGCCGCCATGAGCAACCCGGCCGGC 240
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GGCAAGCACCTCGTCCGCCTCGCCGGCTCCTCCTCGCTCCGCGGTGGCGCCGCCCTGTCT 300
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      CCCGCCGTCTCCATCTCCAGCGGGAGCCGCCCTGCCACGCGAGCCGGGGCCCGTGCCCTG 360
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      CGCGCCGCCTCGCCTCCCCCGGCCTGCTCCATCGCCTCCGTCGGGTGCTGGGAGTCCCGC 420
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GCGCTCCGCCTTGATGGCGATGAGGACTGGGAGGTGGTCGTCGCCCAGGGCGATGACGCC 480
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GTCGGGGCGGATTCTGGGGCGTTCGACGCTGTCCAGGAGGCGGCGGATGAGCACGCGGAG 540
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GCGTTCGGGGCCCCGCCCACCGACCAGGAAGTCCGCGCCGCCGTTGCTAGCATCCAAGAG 600
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      GTATTTGAAAACCATCCTGGATTGGATTCTGATGCACCTGCCCAAGCACTTGCATTGTCC 660
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ------------------------------------------------------------
                                                                                   

consensus_12209#0      CCCATCTCAGGACTTCCTCCATCTGGAATGTTTGTTAATTATTTTTCTGAAGGTTCTACA 720
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      ----------AATGTATTGAACCTGCTATGCTTGTCCTTAACTCAACTGCTCTTTTGACA 50
                                                                                   

consensus_12209#0      CCATCTGATATTAAGAT-TGAGGATTCTACTCCATCTGATGTTAAGATTGACCAATTAGC 779
consensus_12209#2      ------------------------------------------------------------
consensus_12209#1      --AGGGAACATCGGAATGTGCTGGATGCATTCCACCTATTGC-AAGTAGATTCTTCTGTC 107
                                                                                   

consensus_12209#0      CAGCTTAGAACAC-TCTACACCAGACACTGCATCAGAGGAATG-TATTGAACCTGCTATG 837
consensus_12209#2      ----TTAGAACAC-TCTACACCAGACACTGCATCAGAGGAATG-TATTGAGCCTGGTATG 54
consensus_12209#1      CAGGTGAATGTGGGTTTGATTCAGTTCCTATTTATGTATAGCAATGATGAACTTGTT-TG 166
                           * *       * *    ***   **   *  *   *    *  *** * ** * **

consensus_12209#0      CTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTC 897
consensus_12209#2      CTTGTCCTTAACTCAACTGCTCTTTTGACAAGGGAACATCGGAATGTGCTGGATGCATTC 114
consensus_12209#1      TTTGGTAGCA--CCAAATATTATTTTCCAGAGATGACCTATTATTCTTTCGGT----CTT 220
                        ***     *   *** *  * ****    **   ** *   * * *   **      * 

consensus_12209#0      CACCTATTGCAAGTAGATTCTTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAG 957
consensus_12209#2      CACCTATTGCAAGTAGATTATTCTGTCCAGAAAATGGTTATGGCCTTGTCAACTGATAAG 174
consensus_12209#1      TGCCTA--ACATTCATCTCCCAACATGCAGAAAATGGTTATGGCCTTGTCAACTGATAAG 278
                         ****   **   *  *       * *********************************

consensus_12209#0      TCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAG 1017
consensus_12209#2      TCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAG 234
consensus_12209#1      TCTGTATGGGATGCCGTGATGAAAAATGAGGTGGTGCAAGAATTCAGGAAGTCCTTTCAG 338
                       ************************************************************

consensus_12209#0      GATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGG 1077
consensus_12209#2      GATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTATCCTGGAGTGATGAAGTGG 294
consensus_12209#1      GATGCTAAGGAGGCTGATCCCAATGGAAGTTCTTCTGCTTCTCCTGGAGTGATGAAGTGG 398
                       **************************************** *******************

consensus_12209#0      GTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTG 1137
consensus_12209#2      GTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTG 354
consensus_12209#1      GTCATGGAAACCACCCAAGCAAAGATCAAGGAATTCCTTGAGAGCATACTTAAGCTTGTG 458
                       ************************************************************

consensus_12209#0      AACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATG 1197
consensus_12209#2      AACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGTCGATACAGTGAGAATG 414
consensus_12209#1      AACATGCTCTTTCAAGCTCAGAGTGAGGACTATGATTTGTATGACGATACAGTGAGAATG 518
                       ******************************************* ****************

consensus_12209#0      TCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGC 1257
consensus_12209#2      TCCTTCATGCTCGCAGTGTTGGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGC 474
consensus_12209#1      TCCTTCATGCTCGCAGTGTTCGTCTTCATTGTGGTGACTGTGGCTCGCATTAAGTGATGC 578
                       ******************** ***************************************

consensus_12209#0      CAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGC 1317
consensus_12209#2      CAAAAATTCGTGGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGC 534
consensus_12209#1      CAAAAATTCGTCGACTTCACATTTGGTGGTCTGTTAGCTGTGTACAGGATATGTTCTAGC 638
                       *********** ************************************************

consensus_12209#0      CTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTT 1377
consensus_12209#2      CTTTTAAATTCTTGTAGAATGGGTTAAGATCATGGATGGTATCATTATTAGTTGTCAGTT 594
consensus_12209#1      CTTTTAAATTCTTGTCGAATGGGTTAAGATCATGGATGGTATCATTCTTAGTTGTCAGTT 698
                       *************** ****************************** *************

consensus_12209#0      CAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGT 1437
consensus_12209#2      CAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTTTTATATGT 654
consensus_12209#1      CAAGAACTTTCATTTTAAAATTGCCAAGACATCAAGATTCTCAGTGGAGGTCTTATATGT 758
                       *************************************************** ********

consensus_12209#0      TTACCCTATGGGAATACTATGAATTATTGCCTTAAAACATTAGTATTTCAGGATTTTAAT 1497
consensus_12209#2      TTTCCCTATGGGAATACTATGAATTAGGGCCTTAAAACATTAGTATTTCAGGATTTTATG 714
consensus_12209#1      ATGCCCTATGGGAATACTATGAATTATTGCCTTAAAAAAAAAGG---------------- 802
                        * ***********************  ********* *  **                 

consensus_12209#0      GAATTGGTGAGACGAATTTTCATTCAAAAA 1527
consensus_12209#2      CAAAAAAGGA-------------------- 724
consensus_12209#1      ------------------------------