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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12229#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 4034 fasta sequence
[TGGCCAACCAAAATAGCCTAGCCAATCGTGGGCCCCACGCCGACAGCATCCCTCTTCCCTTTCTCTCTCCGCCAACCATCGTCGTCGAGATGCCATCGCTGGTGCTGTCGAGGCTGTCGTTGCCGGAAGCCGCCGTCGCCAGCCGTCGTCGCACCGTCGTCAGATCCGCTGTTGCCAGACGCCGCCGTCGTCGTGCCGTTGCCAGATCCGCCAGGTCGTCGTTGAGCCGTCGCCAGCCGTCGTCGGCGCCGTCGTCTCCGAGGTCGTCGTTGCCGGACGCCGCGCCGTCGTC-AGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCNAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGNCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTTGGGGAAAAGGGGGGAGAGATGAGGAAGAAGAAAGGGTTGTAGAGACTGACACGTGGGTCCCACTGTCATAGGCTCATAATAGAGAGGATGAATGGAGAGGCTGTTGGAGTAAATAAGAGTTTGACTGGCTAAATCAGATGGAGAGTTGGCCAAATAGACATTTGGAGAGTTAGATTTGGAGAAACTGTTGGAGATGCTCTAAGAGGTAACCTCATCGTCACTTGAGTAATAGTACCTTCGAGGATAGGATTGGAAATTCCCCTTTTGTACTTTGCTTGAGTTTTTTTTTCCAGGTCTTCAAGGGATATTGGTGTAAATGTCAGTCGAGGTATACAATTAGAGGTATATATCTCCTTACTAACACTATTAGGTACATACATATATGTACTATGTATGTATGTATCATCTTCCTTTGCATATGCAGCCTGCAGCATGTATGGTACTCCTACATGAGGAGCATAGTACGCCTGCTCGTCATTTTTAGCCATGACGTCATCCCAAAATATCTTGATTTCAGGCCTGGTTTAGTTCTCAACTTTTTCTTTAAACTTCCAACTTTTTTATCAAATCAAAACTTTTCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTTTAATTTCAATCAAACTTCCAATTTTAACGTGAACTAAACACACCCTCAAGCGAGAGGGGTGGTTTAGAAGCAGCATGACGGCATTCCTGATGGCTGCCTCAACAGCCTCCACTGGGTACTGACATGTATATATGGAATTGATGTCTGACACGAAGCTTGATCCCTGATTTAGGCCCTACCTTTTCAGGCTTCAAAGCAGATTTAAAAAAAAAAATGGAGGAAGAGGCGACCCTTGTCGACGTTTGAGATCGTGACTACGGTATTTGCATAATATGTGGATCGTTGGTACCAGGGTATATACGAGATTGAAGTAAAAGAGATGGAGACAATGATTTTTATACAGGTTCGGGTCCCTTATCTGACAGGTAATAGCCCTACTCCTGTTGGCCGAAGCCGGTGTTGCTCTTATTCATCATAATCACACACGTACAATATTTGGGATAACCTATTTAGTTATCGTCGACTTGGCAGCATAGAGTCGACGATAACCAACTCGTAGTCAACGACATGGTAGTCTTCTTCCTTGAATATGAACTCGTCGAGATTAGAAATGGTGCTAGATCACTCGTAGTCAACGACAGGGTAGTCTTCCTCCTCGAATATGAACTCGTTGAGATCAGAGATGACGCTAGATCCCTCTTGCCGGCCTCCAAAGGCACCGGATGGAATATGTCTAGGTTAATCTCTTATGTCGATGTCTAGCGGCGTATTGGTTTGTTTTGTTTTGTGTTGGTCTGTATGTCTTGTGACATGTCCCCTCTCCTCCTATGGGATCTTGTATTTATACCTATTGTTATCTCTCTATCCAAGTAGAACTAGAGAGACCAATATAGATACAATCCGAGTAGTCCTTGTCGTTTCCATATAGAACTTTTCTTATCCTTTCTTATCCGGAATTCCTATATACGAGGTATGATTCCGTATAAAACTTGGTACATGGTGAGCCCTGCCGAGCTTAGTCAATTACTGTTATGTATGTGGTACCAATAACCATGACAACCCTCCAAATATTTTTTAAGAAGAAATTATAAGCGTGTTGAGAATTAAACACCGAGAGTTGAAACCACACACTCCTTCTCACTGCAATATCAAGTGCATCTCTAAAAGCGGATTTAAATTTTAAACTTTGATTTTAGGATTAGTTTTGGACAGATTTTTCACTTGCTTTCGTACCAGTCATGGAAATAGAGTTGGGCAACAAAAAATGACAAAGAAAACCCTAAAATTAATCTTAAAACAAAAGTTTAGAGCTCAAAATCAGCTTTGGATTATATAGGAATAAAGAACTGGACAGAAACCTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTAATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAGATGGTCTTCTTCTAACTGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTCATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGTGAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCCCGTGCTGTTGCACCCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAATCAGACCCGCAACCCCGTTCAGGTACTGTAATATGAGCATGATATCTAATGTTTAACCGCTGGAGCTTTGGCATAACTCCTCCTTCAAATATCATACCTGGTCCACCCTTTTTGTCTTCAGCATACAAGAGAGAAAAATCCTTTAGACACTGGAATCCACCATGGCTGATGATCAGTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTTTCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGGTGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAAAATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAATAAAGGTATAATCGGGTAATATTTAGAATCTGGAGGTTACTTTGTCCTAGCTTGCATAGTGATGATACCAAAGGCTTCTTGTACCTTTCCTCATCCTCACCGGTTATATCATGATCCCAATGTATGACAAGCCTTTTTAGTTTGATTATATTACCTAGCTCCAGAACAACATTTATGGAATTCTTGCTGCAATTGAAGCACCTCAAATACTGAAGAGCTCTCATGTTGCTAATACCATCCGGCAATCTTGCCTGAAAACCCAATTCAAGGGACACCAATTGGCGTAGTTGTACAATGCTTGCAGGCAATTCTGTCACTTTTGAGTTTGTCAGGTCTAGCGTCTGCAGCAGTTGCAGCTTCCCAATTTGCCTTGGGACCTTTGTGAATGAATGGATACATAAATACCTTAACTGATGTAAACTTCCAATATCTTCAATACGGACATTGTCCTCATTCAAATGATTACAGCCTTCTAAATCTAACACCCGCAGAATTTGAAGGCTTGAGAGCATGGGAATTTGCTTACAATCACCAAATGCACTAAGTGACCGGACATGAGAAAAATCACTAGTGTTCAGCCATACACTGTTCTCTTCGCAGTTTCCTTGGAGGGAGAGGCGACGAATCTTGTCAGTCGAAGATGTGATCGTTTGACTGTTTACTATAGTAACAAAGTTTTCTTCAGTTGACAAGCATATGAGTAGATCCAACATGATATCATGGATTCGGCAGTTGATTGCTTTACCGCTGTAGTCCATTTGAACCAATTGTACCATGTTCCTATTTATGAGCTCATTAAAGTA]
[+] EMBL AK119368 [TGGCCAACCAAAATAGCCTAGCCAATCGTGGGCCCCACGCCGACAGCATCCCTCTTCCCTTTCTCTCTCCGCCAACCATCGTCGTCGAGATGCCATCGCTGGTGCTGTCGAGGCTGTCGTTGCCGGAAGCCGCCGTCGCCAGCCGTCGTCGCACCGTCGTCAGATCCGCTGTTGCCAGACGCCGCCGTCGTCGTGCCGTTGCCAGATCCGCCAGGTCGTCGTTGAGCCGTCGCCAGCCGTCGTCGGCGCCGTCGTCTCCGAGGTCGTCGTTGCCGGACGCCGCGCCGTCGTC AGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCGCCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTCGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTTGGGGAAAAGGGGGGAGAGATGAGGAAGAAGAAAGGGTTGTAGAGACTGACACGTGGGTCCCACTGTCATAGGCTCATAATAGAGAGGATGAATGGAGAGGCTGTTGGAGTAAATAAGAGTTTGACTGGCTAAATCAGATGGAGAGTTGGCCAAATAGACATTTGGAGAGTTAGATTTGGAGAAACTGTTGGAGATGCTCTAAGAGGTAACCTCATCGTCACTTGAGTAATAGTACCTTCGAGGATAGGATTGGAAATTCCCCTTTTGTACTTTGCTTGAGTTTTTTTTTCCAGGTCTTCAAGGGATATTGGTGTAAATGTCAGTCGAGGTATACAATTAGAGGTATATATCTCCTTACTAACACTATTAGGTACATACATATATGTACTATGTATGTATGTATCATCTTCCTTTGCATATGCAGCCTGCAGCATGTATGGTACTCCTACATGAGGAGCATAGTACGCCTGCTCGTCATTTTTAGCCATGACGTCATCCCAAAATATCTTGATTTCAGGCCTGGTTTAGTTCTCAACTTTTTCTTTAAACTTCCAACTTTTTTATCAAATCAAAACTTTTCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTTTAATTTCAATCAAACTTCCAATTTTAACGTGAACTAAACACACCCTCAAGCGAGAGGGGTGGTTTAGAAGCAGCATGACGGCATTCCTGATGGCTGCCTCAACAGCCTCCACTGGGTACTGACATGTATATATGGAATTGATGTCTGACACGAAGCTTGATCCCTGATTTAGGCCCTACCTTTTCAGGCTTCAAAGCAGATTTAAAAAAAAAAATGGAGGAAGAGGCGACCCTTGTCGACGTTTGAGATCGTGACTACGGTATTTGCATAATATGTGGATCGTTGGTACCAGGGTATATACGAGATTGAAGTAAAAGAGATGGAGACAATGATTTTTATACAGGTTCGGGTCCCTTATCTGACAGGTAATAGCCCTACTCCTGTTGGCCGAAGCCGGTGTTGCTCTTATTCATCATAATCACACACGTACAATATTTGGGATAACCTATTTAGTTATCGTCGACTTGGCAGCATAGAGTCGACGATAACCAACTCGTAGTCAACGACATGGTAGTCTTCTTCCTTGAATATGAACTCGTCGAGATTAGAAATGGTGCTAGATCACTCGTAGTCAACGACAGGGTAGTCTTCCTCCTCGAATATGAACTCGTTGAGATCAGAGATGACGCTAGATCCCTCTTGCCGGCCTCCAAAGGCACCGGATGGAATATGTCTAGGTTAATCTCTTATGTCGATGTCTAGCGGCGTATTGGTTTGTTTTGTTTTGTGTTGGTCTGTATGTCTTGTGACATGTCCCCTCTCCTCCTATGGGATCTTGTATTTATACCTATTGTTATCTCTCTATCCAAGTAGAACTAGAGAGACCAATATAGATACAATCCGAGTAGTCCTTGTCGTTTCCATATAGAACTTTTCTTATCCTTTCTTATCCGGAATTCCTATATACGAGGTATGATTCCGTATAAAACTTGGTACATGGTGAGCCCTGCCGAGCTTAGTCAATTACTGTTATGTATGTGGTACCAATAACCATGACAACCCTCCAAATATTTTTTAAGAAGAAATTATAAGCGTGTTGAGAATTAAACACCGAGAGTTGAAACCACACACTCCTTCTCACTGCAATATCAAGTGCATCTCTAAAAGCGGATTTAAATTTTAAACTTTGATTTTAGGATTAGTTTTGGACAGATTTTTCACTTGCTTTCGTACCAGTCATGGAAATAGAGTTGGGCAACAAAAAATGACAAAGAAAACCCTAAAATTAATCTTAAAACAAAAGTTTAGAGCTCAAAATCAGCTTTGGATTATATAGGAATAAAGAACTGGACAGAAACCTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTAATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAGATGGTCTTCTTCTAACTGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTCATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGTGAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCCCGTGCTGTTGCACCCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAATCAGACCCGCAACCCCGTTCAGGTACTGTAATATGAGCATGATATCTAATGTTTAACCGCTGGAGCTTTGGCATAACTCCTCCTTCAAATATCATACCTGGTCCACCCTTTTTGTCTTCAGCATACAAGAGAGAAAAATCCTTTAGACACTGGAATCCACCATGGCTGATGATCAGTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTTTCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGGTGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAAAATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAATAAAGGTATAATCGGGTAATATTTAGAATCTGGAGGTTACTTTGTCCTAGCTTGCATAGTGATGATACCAAAGGCTTCTTGTACCTTTCCTCATCCTCACCGGTTATATCATGATCCCAATGTATGACAAGCCTTTTTAGTTTGATTATATTACCTAGCTCCAGAACAACATTTATGGAATTCTTGCTGCAATTGAAGCACCTCAAATACTGAAGAGCTCTCATGTTGCTAATACCATCCGGCAATCTTGCCTGAAAACCCAATTCAAGGGACACCAATTGGCGTAGTTGTACAATGCTTGCAGGCAATTCTGTCACTTTTGAGTTTGTCAGGTCTAGCGTCTGCAGCAGTTGCAGCTTCCCAATTTGCCTTGGGACCTTTGTGAATGAATGGATACATAAATACCTTAACTGATGTAAACTTCCAATATCTTCAATACGGACATTGTCCTCATTCAAATGATTACAGCCTTCTAAATCTAACACCCGCAGAATTTGAAGGCTTGAGAGCATGGGAATTTGCTTACAATCACCAAATGCACTAAGTGACCGGACATGAGAAAAATCACTAGTGTTCAGCCATACACTGTTCTCTTCGCAGTTTCCTTGGAGGGAGAGGCGACGAATCTTGTCAGTCGAAGATGTGATCGTTTGACTGTTTACTATAGTAACAAAGTTTTCTTCAGTTGACAAGCATATGAGTAGATCCAACATGATATCATGGATTCGGCAGTTGATTGCTTTACCGCTGTAGTCCATTTGAACCAATTGTACCATGTTCCTATTTATGAGCTCATTAAAGTA]
[-] EMBL OSS2920A [ CGGCGCCGTCGTCTCCGAGGTCGTCGTTGCCGNACGCCGCGCCGTCGTC AGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGNACCGTCGCNAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGNCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCA ]
[-] EMBL OSS2745A [ TCCGAGGTCGTCGTTGCCGAACGCCGCGCCGTCGTCAAGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCNAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGNCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCA ]
[-] EMBL CB684216 [ GGCTGATGATCAGTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTTTCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGGTGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAAAATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAATAAAGGTATAATCGGGTAATATTTAGAATCTGGAGGTTACTTTGTCCTAGCTTGCATAGTGATGATACCAAAGGCTTCTTGTACCTTTCCTCATCCTCACCGGTTATATCATGATCCCAATGTATGACAAGCCTTTTTAGTTTGATTATATTACCTAGCTCCAGAACAACATTTATGGAATTCTTGCTGCAATTGAAGCACCTCAAATACTGAAGAGCTCTCATGTTGCTAATACCATCCGGCAATCTTGCCTGAAAACCCAATTCAAGGGACACCAATTGGCGTAGTTGTACAATGCTTGCAGGCAATTCTGTCACTTTTGAGTTTGTCAGGTCTAGCGTCTGCAGCAGTTGCAGCTTCCCAATTTGCCTTGGGACCTTTGTGAATGAATGGATACATAAATACCTTAACTGATGTAAACTTCCAATATCTTCAATACGGACATTGTCCTCATTCAAATGATTACAGCCTTCTAAATCTAACACCCGCAGAATTTGAAGGCTTGAGAGCATGGGAATTTGCTTACAATCACCAAATGCACT ]
consensusID : consensus_12229#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 763 fasta sequence
[TTTTTTTTTTTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTAATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAGATGGTCTTCTTCTAACTGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTCATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGTGAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCTCGTGCTGTTGCACCCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAATCAGACCCGCAACCCCGTTCAGGTACTGTAATATGAGCATGATATCTAATGTTTAACCGCTGGAGCTTTGGCATAACTCCTCCTTCAAATATCATACCTGGTCCACCCTTTTTGTCTTCAGCATACAAGAGAGAAAAATCCTTTAGACACTGGAATCCACCATGGCTGATGATCAGTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTTTCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGGTGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAAAATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAATAAAGGT]
[+] EMBL CB684217 [TTTTTTTTTTTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTAATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAGATGGTCTTCTTCTAACTGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTCATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGTGAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCTCGTGCTGTTGCACCCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAATCAGACCCGCAACCCCGTTCAGGTACTGTAATATGAGCATGATATCTAATGTTTAACCGCTGGAGCTTTGGCATAACTCCTCCTTCAAATATCATACCTGGTCCACCCTTTTTGTCTTCAGCATACAAGAGAGAAAAATCCTTTAGACACTGGAATCCACCATGGCTGATGATCAGTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTTTCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGGTGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAAAATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAATAAAGGT]
consensusID : consensus_12229#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 402 fasta sequence
[AATCTTTTTCAAACGCCCCGTCTCTTCCTTTCAAATCGCCAGTCGCGTTAACCGTCGCAANCGTCGTGGCGCGTCGTCTCCGAGGTCGTCGTTGCGGACGCCCGNCGTCGTNAGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTCGGACGCGTGGGCGG]
[-] EMBL OSS3493A [AATCTTTTTCAAACGCCCCGTCTCTTCCTTTCAAATCGCCAGTCGCGTTAACCGTCGCAANCGTCGTGGCGCGTCGTCTCCGAGGTCGTCGTTGCGGACGCCCGNCGTCGTNAGCCGTCGT GACGCCGTCGCCA CCGTTGTCGGCACCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCACGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTCGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCA ]
[-] EMBL OSS2876A [ gtnntcaAGCCGTCGTCGANGCCGTCGCCAGCCGTTGTCGGCACCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTCGGACGCGTGGGCGG]
[-] EMBL OSS2882A [ GCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTCGGANGCGTGGGCGG]
[-] EMBL OSS3302A [ GTCGACGCCGTCGNCAGCCGTTGTCGNCACCGTCGNCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCACGGCGGATTCGACCGGTGCGNCATGTAGTAGAGGACGCCGCCATCTCGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCNGCGGCACCTNCTGCGAGCTGAGCAGAGTGGGTTCGGACGCGTGGGCGG]
[-] EMBL OSS2877A [ GGCACCGTCGCCAGATCCGTCGCCAGCCGAGGTCGCCGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGCCCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTCGGACGCGTGGGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12229#0 TGGCCAACCAAAATAGCCTAGCCAATCGTGGGCCCCACGCCGACAGCATCCCTCTTCCCT 60
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTCTCTCTCCGCCAACCATCGTCGTCGAGATGCCATCGCTGGTGCTGTCGAGGCTGTCGT 120
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGCCGGAAGCCGCCGTCGCCAGCCGTCGTCGCACCGTCGTCAGATCCGCTGTTGCCAGAC 180
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GCCGCCGTCGTCGTGCCGTTGCCAGATCCGCCAGGTCGTCGTTGAGCCGTCGCCAGCCGT 240
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CGTCGGCGCCGTCGTCTCCGAGGTCGTCGTTGCCGGACGCCGCGCCGTCGTCAGCCGTCG 300
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCNAGATCCGTCGCCAGCCGAGGTCGC 360
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CGTCCCGTCGTCTCCGAGGTCGTCGTCGCCTGCCGTCGTCATCGCCATGCCCCGGCGGAT 420
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCTCCTGCCGTTGTGTTCGCC 480
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGNCCCAAGCGGCGGCGGCGGCA 540
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CCTGCTGCGAGCTGAGCAGAGTGGGTTTGGGGAAAAGGGGGGAGAGATGAGGAAGAAGAA 600
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AGGGTTGTAGAGACTGACACGTGGGTCCCACTGTCATAGGCTCATAATAGAGAGGATGAA 660
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGGAGAGGCTGTTGGAGTAAATAAGAGTTTGACTGGCTAAATCAGATGGAGAGTTGGCCA 720
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AATAGACATTTGGAGAGTTAGATTTGGAGAAACTGTTGGAGATGCTCTAAGAGGTAACCT 780
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CATCGTCACTTGAGTAATAGTACCTTCGAGGATAGGATTGGAAATTCCCCTTTTGTACTT 840
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGCTTGAGTTTTTTTTTCCAGGTCTTCAAGGGATATTGGTGTAAATGTCAGTCGAGGTAT 900
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ACAATTAGAGGTATATATCTCCTTACTAACACTATTAGGTACATACATATATGTACTATG 960
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TATGTATGTATCATCTTCCTTTGCATATGCAGCCTGCAGCATGTATGGTACTCCTACATG 1020
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AGGAGCATAGTACGCCTGCTCGTCATTTTTAGCCATGACGTCATCCCAAAATATCTTGAT 1080
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTCAGGCCTGGTTTAGTTCTCAACTTTTTCTTTAAACTTCCAACTTTTTTATCAAATCAA 1140
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AACTTTTCTACACACATAAACTTCCAACTTTTCCGTCACATCGTTTTAATTTCAATCAAA 1200
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CTTCCAATTTTAACGTGAACTAAACACACCCTCAAGCGAGAGGGGTGGTTTAGAAGCAGC 1260
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ATGACGGCATTCCTGATGGCTGCCTCAACAGCCTCCACTGGGTACTGACATGTATATATG 1320
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GAATTGATGTCTGACACGAAGCTTGATCCCTGATTTAGGCCCTACCTTTTCAGGCTTCAA 1380
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AGCAGATTTAAAAAAAAAAATGGAGGAAGAGGCGACCCTTGTCGACGTTTGAGATCGTGA 1440
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CTACGGTATTTGCATAATATGTGGATCGTTGGTACCAGGGTATATACGAGATTGAAGTAA 1500
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AAGAGATGGAGACAATGATTTTTATACAGGTTCGGGTCCCTTATCTGACAGGTAATAGCC 1560
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CTACTCCTGTTGGCCGAAGCCGGTGTTGCTCTTATTCATCATAATCACACACGTACAATA 1620
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTTGGGATAACCTATTTAGTTATCGTCGACTTGGCAGCATAGAGTCGACGATAACCAACT 1680
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CGTAGTCAACGACATGGTAGTCTTCTTCCTTGAATATGAACTCGTCGAGATTAGAAATGG 1740
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGCTAGATCACTCGTAGTCAACGACAGGGTAGTCTTCCTCCTCGAATATGAACTCGTTGA 1800
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GATCAGAGATGACGCTAGATCCCTCTTGCCGGCCTCCAAAGGCACCGGATGGAATATGTC 1860
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TAGGTTAATCTCTTATGTCGATGTCTAGCGGCGTATTGGTTTGTTTTGTTTTGTGTTGGT 1920
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CTGTATGTCTTGTGACATGTCCCCTCTCCTCCTATGGGATCTTGTATTTATACCTATTGT 1980
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TATCTCTCTATCCAAGTAGAACTAGAGAGACCAATATAGATACAATCCGAGTAGTCCTTG 2040
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TCGTTTCCATATAGAACTTTTCTTATCCTTTCTTATCCGGAATTCCTATATACGAGGTAT 2100
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GATTCCGTATAAAACTTGGTACATGGTGAGCCCTGCCGAGCTTAGTCAATTACTGTTATG 2160
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TATGTGGTACCAATAACCATGACAACCCTCCAAATATTTTTTAAGAAGAAATTATAAGCG 2220
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGTTGAGAATTAAACACCGAGAGTTGAAACCACACACTCCTTCTCACTGCAATATCAAGT 2280
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GCATCTCTAAAAGCGGATTTAAATTTTAAACTTTGATTTTAGGATTAGTTTTGGACAGAT 2340
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTTTCACTTGCTTTCGTACCAGTCATGGAAATAGAGTTGGGCAACAAAAAATGACAAAGA 2400
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AAACCCTAAAATTAATCTTAAAACAAAAGTTTAGAGCTCAAAATCAGCTTTGGATTATAT 2460
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AGGAATAAAGAACTGGACAGAAACCTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTA 2520
consensus_12229#1 ---------------TTTTTTTTTTTGATGGATTCTTTGGTGGCATGAGAGGAACGAGTA 45
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAG 2580
consensus_12229#1 ATACCATTGTCAAATGTAGTTTTCAACTTTCAGCTGTCGCAGATGCTACATGCTAGCTAG 105
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ATGGTCTTCTTCTAAC-TGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTC 2639
consensus_12229#1 ATGGTCTTCTTCTAAC-TGGTACTGGTTCCCTCTAGTTGTTCAGTAGCATCATTGTCCTC 164
consensus_12229#2 --AATCTTTTTCAAACGCCCCGTCTCTTCCTTTCAAATCGCCAGTCGCGTTAACCGTCGC 58
**** *** *** **** * * * **** ** * * * *
consensus_12229#0 ATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGT- 2698
consensus_12229#1 ATTCGTTGCCATATGTTCTTTCAGAAATTTTCTTACTTCAAGGGAGGGATGATTGGGGT- 223
consensus_12229#2 AANCGTCGTGGCGCGTCGTCTCCGAGGTCGTCGTTGC---------GGACGCCCGNCGTC 109
* *** * ** * ** ** * ** * *** * * **
consensus_12229#0 GAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCCCGTGCTGTTGCAC 2758
consensus_12229#1 GAAGATTAGCATGATTTCTTATGGCAACCTCCGCGACCTCCACCTCTCGTGCTGTTGCAC 283
consensus_12229#2 GTNAGCCGTCGTCGACGCCGTCGCCAGCCGTTGTCGGCACCGTCGCCAGATCCGTCGC-- 167
* * * * * ** ** * * ** * * * * ** **
consensus_12229#0 CCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAAT 2818
consensus_12229#1 CCGCACAATAAATGTCCACCAGGAACAATTTGAGGGAGGTCAGTTGATGGATGCTGAAAT 343
consensus_12229#2 ---CAGCCGAGGTCGCCGTCCCGT-CGTCTCCGAGGTCGTC-GTCGCCTGCCGTCGTCAT 222
** * * ** * * * * ** *** ** * * * * **
consensus_12229#0 CAG-ACCCGCAACCCCGTTCAGGTACTGTAATATG-AGCATGATAT-CTAATGTTTAACC 2875
consensus_12229#1 CAG-ACCCGCAACCCCGTTCAGGTACTGTAATATG-AGCATGATAT-CTAATGTTTAACC 400
consensus_12229#2 CGCCATGCCCCGGCGGATTCGACCGGTGCGGCATGTAGTAGAGGACGCCGCCATCTNGCT 282
* * * * * *** ** *** ** * * * * * *
consensus_12229#0 GCTGGAGCTTTGGCATAACTCCTCCTTCAAATA-TCATACCTGGTCCACCCTTTTTGTCT 2934
consensus_12229#1 GCTGGAGCTTTGGCATAACTCCTCCTTCAAATA-TCATACCTGGTCCACCCTTTTTGTCT 459
consensus_12229#2 CCTGCCGTTGTGTT-CGCCGCCCGCGCCGATTGGCCGCCCCACGTCCACGCGAGCTCGGC 341
*** * * ** * ** * * * * * ** ****** * *
consensus_12229#0 TCAGCATACAAGAGAGAAAAATCCTTTAGAC--ACTGGAATCCACCATGGCTGATGATCA 2992
consensus_12229#1 TCAGCATACAAGAGAGAAAAATCCTTTAGAC--ACTGGAATCCACCATGGCTGATGATCA 517
consensus_12229#2 CCAAGCGGCGGCGGCGGCACCTGCTGCGAGCTGAGCAGAGTGGGTTCGGACGCGTGGGCG 401
** * * * * * ** * * ** * * * ** *
consensus_12229#0 GTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTT 3052
consensus_12229#1 GTGTTTCTTGATTGGATTCCCGTACTTCTAGATAGAGGTTTACCAAGACAGGCAAGTCTT 577
consensus_12229#2 G----------------------------------------------------------- 402
*
consensus_12229#0 TCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGG 3112
consensus_12229#1 TCAGTGGCTGCATATCTTCCTCTTCCAACTGTTCTAAACGGATATCTAGGTAGATGAGGG 637
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAA 3172
consensus_12229#1 TGGAGAATGATGATATCCGTCTTGGAATCCTGTGGAAGTGCGCCATGCCATTCATCTCAA 697
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAAT 3232
consensus_12229#1 AATGGCGGAGATGCTGTGGAGGAGGGTACCATGACTCTATTAAGAAATCCACGGTACAAT 757
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 AAAGGTATAATCGGGTAATATTTAGAATCTGGAGGTTACTTTGTCCTAGCTTGCATAGTG 3292
consensus_12229#1 AAAGGT------------------------------------------------------ 763
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ATGATACCAAAGGCTTCTTGTACCTTTCCTCATCCTCACCGGTTATATCATGATCCCAAT 3352
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GTATGACAAGCCTTTTTAGTTTGATTATATTACCTAGCTCCAGAACAACATTTATGGAAT 3412
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TCTTGCTGCAATTGAAGCACCTCAAATACTGAAGAGCTCTCATGTTGCTAATACCATCCG 3472
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GCAATCTTGCCTGAAAACCCAATTCAAGGGACACCAATTGGCGTAGTTGTACAATGCTTG 3532
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CAGGCAATTCTGTCACTTTTGAGTTTGTCAGGTCTAGCGTCTGCAGCAGTTGCAGCTTCC 3592
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CAATTTGCCTTGGGACCTTTGTGAATGAATGGATACATAAATACCTTAACTGATGTAAAC 3652
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTCCAATATCTTCAATACGGACATTGTCCTCATTCAAATGATTACAGCCTTCTAAATCTA 3712
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 ACACCCGCAGAATTTGAAGGCTTGAGAGCATGGGAATTTGCTTACAATCACCAAATGCAC 3772
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TAAGTGACCGGACATGAGAAAAATCACTAGTGTTCAGCCATACACTGTTCTCTTCGCAGT 3832
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TTCCTTGGAGGGAGAGGCGACGAATCTTGTCAGTCGAAGATGTGATCGTTTGACTGTTTA 3892
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 CTATAGTAACAAAGTTTTCTTCAGTTGACAAGCATATGAGTAGATCCAACATGATATCAT 3952
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 GGATTCGGCAGTTGATTGCTTTACCGCTGTAGTCCATTTGAACCAATTGTACCATGTTCC 4012
consensus_12229#1 ------------------------------------------------------------
consensus_12229#2 ------------------------------------------------------------
consensus_12229#0 TATTTATGAGCTCATTAAAGTA 4034
consensus_12229#1 ----------------------
consensus_12229#2 ----------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||