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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12241#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2229 fasta sequence
[TAAACAATACACACAAAAGTCTCGACCCGTTTCGCCCCGACCGGTCGCCGCGCCACCACCCACTCCCCCTCAAACACCGGCGGTGGTCATGCCGCCTCCGCCTCCTCCTCCGCCGCCGCCGCCGCCGTCTCCTCCTCGCCTTCCTCTCACCGCCCACCGCCTCCCTCTCCCGCCCGCGACCTCGCCCCCCGCCTCGCTCCTCCTCGCGCCGCGCCCTTCCCCCACCCGCGCGCTCGCGCTCCTCTTCCCGGACTCCTCCGCGCGCCTCCTCCCCTCCCTGCCGCCCGCCGCCTCGCTCCCCGCCACCGCCGTCCCCTCCCCGCTCGCCGCTGCCGCCTGCTTCGTGCTCCTGCTGCCCTCCTCCCACCTCCTCTTCCTCTCCGCGCACCCGTCCCCTTCCTCCCCCGCGGCCCACCTCCGCGCCTACTCCCTCGCCTCCGGCCGCTTCTCGCCCGCCCCGCTCTCCTTCAAGCGCCAGGCCTCCGCCTCGGGGCTGCCCCTGCACGGCCTCCCGTTCGGCCTCGGCGTCCGCCTCGCCGGCGGGGTCAACGCCGTGGCTCTGCTGTCCCTCTCCGCCGGGCAGATCTGGGTGCTAGCCCCAGGGATGGCTGCGGACGGGCGCACGGTGGAGCTGCACAAGTGCGCGGTCGTCGAGCTCGAGCCGTCGCGGCCGGTGTACGCCATGGAGGTTGCCATGGGGAGGCTGCTCCTCGGTGAGGCTGGTGGTTTGCGCGTGTTCCCGCTACAAGGCTTGATGAAGAGTGGGAAAGAGAGGCAGGTGAGGAAGGAGGGTGCGGGGGCAGCAGTAAGGAAGAGCCTGCACAAGAAGAATGGAATTCGGAATGGTTTTATTGTGCCAATTGGGCATGGCGGTAGCGAGGGAGGTGGCAAACGAGAAGCTGTTTCCACTCGTAAGCTGGCAACTTTGAGAGTAAAACAGACTTCAGGGAGCTATTTCTCTTTCTTTTCCTCATGTAGTTCTGAGGATCATCATAACTCACAAGGTGCCGTAGAAGTGAAAAATGTAGTGAAAGTTGTTTCAATCCGTCCTCTTTCCAAGGACAAGTTTTTGGTCCTTGATTCAGCTGGATTGTTACATGTATTCAGTCTTCAAAACAAAGAATTGCTCTCAGAAGCTACTAGCAAGAGATATAGTGGAAATCACACACACTGTTTGGATAATGCCATGAAAGTGCAGCTATTTGCTGTCTTTCCAAGTAGCTCTACAAAGACAGAAATCTTTTGGATTTCGGATGGTGGGCATTCCATACACATAATGTCAGCACTTGATGTTGAACCCCCCAACAGTGATAATGGAGGTGGTGATGGAGAAAGAGAATCAACAACCATTAAGCTCACAGCTATTGAAGCAATCTTTACAAGTGAAAAGGTTCAGGACATTGTGCCTATCTCCAAGGATTCAGTCCTTATCCTTGGTCAAGGCAACATGTTTTTGTATGGAACTTCTTGAA-TTTTGTTGATTATATCATATATTCGGTGGGAGATGTG-AATGTTTGTCTAGATCATGAATTTGCAGTTTCGATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTGAAGAATGCAGTTGTTCACCTGTCTTTGAAGTCATGAGTATCATTAGTCTTTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAGTTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTCTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAGGTTTGGTGCTCCACAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGTCAGGTTTTCACAATGCGCACGCTAGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATTTGCCCCGTTTGGAAA----AAAAAAAAAAAAAAAAAA]
[+] EMBL AK066673 [TAAACAATACACACAAAAGTCTCGACCCGTTTCGCCCCGACCGGTCGCCGCGCCACCACCCACTCCCCCTCAAACACCGGCGGTGGTCATGCCGCCTCCGCCTCCTCCTCCGCCGCCGCCGCCGCCGTCTCCTCCTCGCCTTCCTCTCACCGCCCACCGCCTCCCTCTCCCGCCCGCGACCTCGCCCCCCGCCTCGCTCCTCCTCGCGCCGCGCCCTTCCCCCACCCGCGCGCTCGCGCTCCTCTTCCCGGACTCCTCCGCGCGCCTCCTCCCCTCCCTGCCGCCCGCCGCCTCGCTCCCCGCCACCGCCGTCCCCTCCCCGCTCGCCGCTGCCGCCTGCTTCGTGCTCCTGCTGCCCTCCTCCCACCTCCTCTTCCTCTCCGTGCACCCGTCCCCTTCCTCCCCCGCGGCCCACCTCCGCGCCTACTCCCTCGCCTCCGGCCGCTTCTCGCCCGCCCCGCTCTCCTTCAAGCGCCAGGCCTCCGCCTCGGGGCTGCCCCTGCACGGCCTCCCGTTCGGCCTCGGCGTCCGCCTCGCCGGCGGGGTCAACGCCGTGGCTCTGCTGTCCCTCTCCGCCGGGCAGATCTGGGTGCTAGCCCCAGGGATGGCTGCGGACGGGCGCACGGTGGAGCTGCACAAGTGCGCGGTCGTCGAGCTCGAGCCGTCGCGGCCGGTGTACGCCATGGAGGTTGCCATGGGGAGGCTGCTCCTCGGTGAGGCTGGTGGTTTGCGCGTGTTCCCGCTACAAGGCTTGATGAAGAGTGGGAAAGAGAGGCAGGTGAGGAAGGAGGGTGCGGGGGCAGCAGTAAGGAAGAGCCTGCACAAGAAGAATGGAATTCGGAATGGTTTTATTGTGCCAATTGGGCATGGCGGTAGCGAGGGAGGTGGCAAACGAGAAGCTGTTTCCACTCGTAAGCTGGCAACTTTGAGAGTAAAACAGACTTCAGGGAGCTATTTCTCTTTCTTTTCCTCATGTAGTTCTGAGGATCATCATAACTCACAAGGTGCCGTAGAAGTGAAAAATGTAGTGAAAGTTGTTTCAATCCGTCCTCTTTCCAAGGACAAGTTTTTGGTCCTTGATTCAGCTGGATTGTTACATGTATTCAGTCTTCAAAACAAAGAATTGCTCTCAGAAGCTACTAGCAAGAGATATAGTGGAAATCACACACACTGTTTGGATAATGCCATGAAAGTGCAGCTATTTGCTGTCTTTCCAAGTAGCTCTACAAAGACAGAAATCTTTTGGATTTCGGATGGTGGGCATTCCATACACATAATGTCAGCACTTGATGTTGAACCCCCCAACAGTGATAATGGAGGTGGTGATGGAGAAAGAGAATCAACAACCATTAAGCTCACAGCTATTGAAGCAATCTTTACAAGTGAAAAGGTTCAGGACATTGTGCCTATCTCCAAGGATTCAGTCCTTATCCTTGGTCAAGGCAACATGTTTTTGTATGGAACTTCTTGAA TTTTGTTGATTATATCATATATTCGGTGGGAGATGTG AATGTTTGTCTAGATCATGAATTTGCAGTTTCGATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTGAAGAATGCAGTTGTTCACCTGTCTTTGAAGTCATGAGTATCATTAGTCTTTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAGTTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTCTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAGGTTTGGTGCTCCACAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGACAGGTTTTCACAATGCGCACGCTAGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATT ]
[+] EMBL CB674926 [ TCAAACACCGGCGGAGGTCATGCCGCCTCCGCCTCCTCCTCCGCCGCCGCCGCCGCCGTCTCCTCCTCGCCTTCCTCTCACCGCCCACCGCCTCCCTCTCCCGCCCGCGACCTCGCCCCCCGCCTCGCTCCTCCTCGCGCCGCGCCCTTCCCCCACCCGCGCGCTCGCGCTCCTCTTCCCGGACTCCTCCGCGCGCCTCCTCCCCTCCCTGCCGCCCGCCGCCTCGCTCCCCGCCACCGCCGTCCCCTCCCCGCTCGCCGCTGCCGCCTGCTTCGTGCTCCTGCTGCCCTCCTCCCACCTCCTCTTCCTCTCCGCGCACCCGTCCCCTTCCTCCCCCGCGGCCCACCTCCGCGCCTACTCCCTCGCCTCCGGCCGCTTCTCGCCCGCCCCGCTCTCCTTCAAGCGCCAGGCCTCCGCCTCGGGGCTGCCCCTGCACGGCCTCCCGTTCGGCCTCGGCGTCCGCCTCGCCGGCGGGGTCAACGCCGTGGCTCTGCTGTCCCTCTCCGCCGGGCAGATCTGGGTGCTAGCCCCAGGGATGGCTGCGGACGGGCGCACGGTGGAGCTGCACAAGTGCGCGGTCGTCGAGCTCGAGCCGTCGCGGCCGGTGTACGCCATGGAGGTTGCCATGGGGAGGCTGCTCCTCGGTGAGGCTGGTGGTTTGCGCGTGTTCCCGCTACA ]
[+] EMBL CB640618 [ GCCTCCTCCTCCGCCGCCGCCGCCGCCGTCTCCTCCTCGCCTTCCTCTCACCGCCCACCGCCTCCCTCTCCCGCCCGCGACCTCGCCCCCCGCCTCGCTCCTCCTCGCGCCGCGCCCTTCCCCCACCCGCGCGCTCGCGCTCCTCTTCCCGGACTCCTCCGCGCGCCTCCTGCCCTCCCTGCCGCCCGCCGCCTCGCTCCCCGCCACCGCCGTCCCCTCCCCGCTCGCCGCTGCCGCCGGCTGCGTGCTCCTGCTGCCCTCCTACCACCTCCTCTTCCTCTCCGCGCACCCGTCCGCTTCCTCCCGCGCGGCCCACCTCCGCGCCTACTCCCTCGCCTCCGGCCGCTTCTCGCCCGCCCCGCTCTCCTTGAAGCGCCACGCCTCCGCCTAGGGGCTGCCCCTGCACGGACTGCCGGGCGGCCTCGGCGT ]
[+] EMBL CB685616 [ CCGCCTCCTCGCCCCCCGCCTCGCTCCTCCTCGCGCCGCGCCCTTCCCCCACCCGCGCGCTCGCGCTCCTCTTCCCGGACTCCTCCGCGCGCCTCCTCCCCTCCCTGCCGCCCGCCGCCTCGCTCCCCGCCACCGCCGTCCCCTCCCCGCTCGCCGCTGCCGCCTGCTTCGTGCTCCTGCTGCCCTCCTCCCACCTCCTCTTCCTCTCCGCGCACCCGTCCCCTTCCTCCCCCGCGGCCCACCTCCGCGCCTACTCCCTCGCCTCCGGCCGCTTCTCGCCCGCCCCGCTCTCCTTCAAGCGCCAGGCCTCCGCCTCGGGGCTGCCCCTGCACGGCCTCCCGTTCGGGCTCGGCGTCCGCCTCGCCGGCGGGGGCAACGCCGTGGCTCTGCTGTCCCTCTCCGCCGGGCAGATCTGGGTGCTAGCCCCAGGGATGGCTGCGGACGGGCGCACGGag ]
[+] EMBL CA766844 [ CCTCGGTGAGGCTGGTGGTTTGCGCGTGTTCCCGCTACAAGGCTTGATGAAGAGTGGGAAAGAGAGGCAGGTGAGGAAGGAGGGTGCGGGGGCAGCAGTAAGGAAGAGCCTGCACAAGAAGAATGGAATTCGGAATGGTTTTATTGTGCCAATTGGGCATGGCGGTAGCGAGGGAGGTGGCAAACGAGAAGCTGTTTCCACTCGTAAGCTGGCAACTTTGAGAGTAAAACAGACTTCAGGGAGCTATTTCTCTTTCTTTTCCTCATGTAGTTCTGAGGATCATCATAACTCACAAGGTGCCATAGAAGTGAAAAATGTAGTGAAAGTTGTTTCAATCCGTCCTCTTTCCAAGGACAAGTTTTTGGTCCTTGATTCAGCTGGATTGTTACATGTATTCAGTCTTCAAAACAAAGAATTGCTCTCAGAAGCTACTAGCAAGAGATATAGTGGAAATCACACACACTGTTTGGATAATGCCATGAAAGTGCAGCTATTTGCTGTCTTTCCAAGTAGCTCTACAAAGACAGAAATCTTTTGGATTTCGGATGGTGGGCATTCCATACACATAATGTCAGCACTTGATGTTGAACCCCCCAACAGTGATAATGGAGGTGGTGATGGAGAAAGAGAATCAACAACCATTAAGCTCACAGCTATTGAAGCAATCTTTACAAGTGAAAAGGNTCAGGACATTGTGCCTATCTCCAAGGATTCAGTCCTTATCCTTGGTCAAGGCAACATGNTTTTGTATGGAACTTCTTGAATTTTTGTTGGNTATATCATATATTCGGNGGGAGATGNGAAAGGTTGGNCTAGATC ]
[-] EMBL CB685617 [ CTTATCCTTGGTCAAGGCAACATGTTTTTGTATGGAACTTCTTGAA TTTTGTTGATTATATCATATATTCGGTGGGAGATGTG AATGTTTGTCTAGATCATGAATTTGCAGTTTCGATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTGAAGAATGCAGTTGTTCACCTGTCTTTGAAGTCATGAGTATCATTAGTCTTTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAGTTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTCTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAGGTTTGGTGCTCCACAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCAGGTTCAATGTCAGGTTTTCACAATGCGCACGCTAGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTATGTCTGAAATCAAAATCTAGTTA ]
[-] EMBL CB674927 [ cacacATTATCTTTGGTATCAGGTGGGAGATGTG AATGTTTGTCTAGATCATGAATTTGCAGTTTCGATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTGAAGAATGCAGTTGTTCACCTGTCTTTGAAGTCATGAGTATCATTAGTCTTTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAGTTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTCTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAGGTTTGGTGCTCCACAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGTCAGGTTTTCACAATGCGCACGCTAGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATTTGCCCCGTTTGGAAA gt ]
[-] EMBL CA761321 [ GATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTAAAGAATGCAGTTGTTCCCCCGTCTTTGAAGTCATGAGTATCATTAGTCTCTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAATTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTTTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAAGTTTGGTGCTCCCCAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGTCAGGTTTTCACAATGCGCACG AGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATTTGCCCCGTTTGGAAAGTTTAAAAAAAAAAAAAAAAAA]
[-] EMBL CA760991 [ GATGGGTTTTTGGCTGAAGACAGGTGTTGGAGATTTTAAAGAATGCAGTTGTTCCCCCGTCTTTGAAGTCATGAGTATCATTAGTCTCTAATTTCAGTTAGCAGATGAAATACTCGAGACTTCAACAGCCAGCAAGAATTGAAAGGTGCAGGCCGTTCTCCATCTTGTCAACTGTCTGAAAGCAACATTACAAAACTATAGGTCTTTCAGCACAGTTCACAAGCCACAGCAACTTTTGAACAGGTGAAGCCAGATTATTCCCAGAATACAACCACCCAGTTGTTTTTGCATACACATTTTGCGTGCCAGGACAACTGCAGTTCTGGTTGCGATATCTGGAAGAAGATAAGGCTGCAATCCTATGCCCAGCTCAGCTGTTGTGGAACGTGGATCATCATCAAGTGGGTCGGTTATGAAGCTACAAGTTTGGTGCTCCCCAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGTCAGGTTTTCACAATGCGCACG AGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATTTGCCCCGTTTGGAAAGTTTAAAAAAAAAAAAAAAAAA]
[+] EMBL C97754 [ TTATGAAGCTACAGGTTTGGTGCTCCACAAGGAGGTTGATCAGTTCAGAGACTGGACCTTGAGTCCATGGTGTCCTGGAGTTCAGCGAGTATTTTCGTTCCAAGTGCCAGGCCCCGAGGACTTCAGAAACCAATAATGTATTTGCCATGTTCAATGTCAGGTTTTCACAATGCGCACGCTAGTACGGTGTGAGCTTGCAAACATTTACCCGTTGTGCCTGTTTCTGAAATCAAAATCTAGTTATTTGCCCCGTTTGGAAA AAAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||