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Oryza sativa
cluster # 12273 cluster # 12273       Sequences # 10       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12273#0 length = 2748 sequences # 6  
consensus_12273#1 length = 670 sequences # 2  
 consensus_12273#2 length = 632 sequences # 1  
consensus_12273#3 length = 261 sequences # 1  
consensusID : consensus_12273#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2748
fasta sequence 
                              [CCCCTCTACTCGCGGCTGCGGCGGCAAGGCGGCGAGACGTGGGAGAGGGATTTACAGGTAGAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCAC-TGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGA-GGATTCATCTGGTAT-ATTC-TGGGA-TAATGAC-AGTTTA-GCAGGACTGTTGGCAC-TGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAATCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGCGAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGATTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGTTGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGCTGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGGAAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAACCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCCATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATCTTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATCAAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACTTATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCATTGATCTTGTCATTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAAGATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGACATGGATATGGCAAAACATATTGTAATGGATGCAAAAATTGATTACCCAGCAGCCTGCAATGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACATATTAGTAGCACTAAAAACAGAAGGAGTTAATATTTATGGTGGACCTATTGCGCACAAAGCTCTGGGATTTCCAAAAGCTGTTTCATTTCATCATGAGTATAGTTCTATGGCCTGCACTGTTGAGTTTGTTGATGATGTTCAATCAGCAATTGACCATATTCATCGTTATGGAAGTGCTCATACAGATTGTATCGTCACTACAGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCGTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATCCCGATGGATTATTGATTTTGGGGG-TCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTATCTCCACTTTTTCAATCATGCTACGACATATCGCCGTGGATGCATATATTTGGTAGCATAGATTCCTCAGCTGAGGCTCTACTTGAGCTTCCCCTTTTGTTCTGATAAACATCACTAATTGTGGGGTTCCGCTTTCAGTTCTGAGAAGGTTCCGCTTTCAAACGTGACACTACAAATAAATTC]

[+] EMBL AK102633             [CCCCTCTACTCGCGGCTGCGGCGGCAAGGCGGCGAGGCGTGGGAGAGGGATTTACAGGTAGAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCAC TGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGA GGATTCATCTGGTAT ATTC TGGGA TAATGAC AGTTTA GCAGGACTGTTGGCAC TGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAATCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGCGAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGATTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGTTGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGCTGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGGAAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAACCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCCATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATCTTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATCAAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACTTATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCATTGATCTTGTCATTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAAGATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGACATGGATATGGCAAAACATATTGTAATGGATGCAAAAATTGATTACCCAGCAGCCTGCAATGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACATATTAGTAGCACTAAAAACAGAAGGAGTTAATATTTATGGTGGACCTATTGCGCACAAAGCTCTGGGATTTCCAAAAGCTGTTTCATTTCATCATGAGTATAGTTCTATGGCCTGCACTGTTGAGTTTGTTGATGATGTTCAATCAGCAATTGACCATATTCATCGTTATGGAAGTGCTCATACAGATTGTATCGTCACTACAGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCGTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATCCCGATGGATTATTGATTTTGGGGG TCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTATCTCCACTTTTTCAATCATGCTACGACATATCGCCGTGGATGCATATATTTGGTAGCATAGATTCCTCAGCTGAGGCTCTACTTGAGCTTCCCCTTTTGTTCTGATAAACATCACTAATTGTGGGGTTCCGCTTTCAGTTCTGAGAAGGTTCCGCTTTCAAACGTGACACTACAAATAAATTC]
[+] EMBL AK101985             [CCCCTCTACTCGCGGCTGCGGCGGCAAGGCGGCGAGACGTGGGAGAGGGATTTACAGGTAGAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCAC TGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGA GGATTCATCTGGTAT ATTC TGGGA TAATGAC AGTTTA GCAGGACTGTTGGCAC TGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAATCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGCGAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGATTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGTTGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGCTGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGGAAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAACCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCCATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATCTTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATCAAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACTTATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCATTGATCTTGTCATTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAAGATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGACATGGATATGGCAAAACATATTGTAATGGATGCAAAAATTGATTACCCAGCAGCCTGCAATGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACATAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL OSD714               [                    GCGGCAAGGCGGCGAGACGTGGGAGAGGGATTTACAGGTAGAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCAC TGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGA GGATTCATCTGGTAT ATTC TGGGA TAATGAC AGTTTA GCAGGACTGTTGGCAC TGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAATCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGCGAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGATTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGTTGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGCTGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGGAAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAACCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCCATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATCTTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATCAAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACTTATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCATTGATCTTGTCACTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAAGATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGACATGGATATGGCAAAACTTATTGTAATGGATGCAAAAACTGATTACCCAGCAGCCTGCAATGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACATATTAGTAGCACTAAAAACAGAAGGAGTTAATATTTATGGTGGACCTATTGCGCACAAAGCTCTGGGATTTCCAAAAGCTGTTTCATTTCATCATGAGTATAGTTCTATGGCCTGCACTGTTGAGTTTGTTGATGATGTTCAATCAGCAATTGACCATATTCATCGTTATGGAAGTGCTCATACAGATTGTATCGTCACTACAGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGACGTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTTCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCA                                                                                                                                                                                                       ]
[+] EMBL AU064255             [                                                                                                                                                                                                                                                                                                           GAGTGGGGCGACA NGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTTGAAACTGTTGAGTCANTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTNCATATGAGGGATTCAACTGGNATAATTCTTGGGATTAATGACAAGNTTAGGCAGGACTTTTTGCACTTGGACCTNAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU062743             [                                                                                                                                                                                                                                                                                                                                GGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCAAAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGATGGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCAC TGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGA GGATTCATCTGGTAT ATTC TGGGA TAATGAC AGTTTA GCAGGACTGTTGGCAC TGGGACTG AAGCTGtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL C97699               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAC AGTTTA GCAGGACTGTTGGCAC TGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGNGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAATCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGCGAATTTGTGGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]




>consensus_12273#0
CCCCTCTACTCGCGGCTGCGGCGGCAAGGCGGCGAGACGTGGGAGAGGGATTTACAGGTA
GAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGT
CGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGC
AGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCA
GGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGG
AGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCA
AAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGAT
GGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCAC
CGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAGTCATT
ATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGC
TCCATATGAGGATTCATCTGGTATATTCTGGGATAATGACAGTTTAGCAGGACTGTTGGC
ACTGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGG
TCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCA
AGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAA
GGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAA
TCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGC
GAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGA
TTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGT
TGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGC
TGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGG
AAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAA
CCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCC
ATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATC
TTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATC
AAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACT
TATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCAT
TGATCTTGTCATTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAA
GATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGA
CATGGATATGGCAAAACATATTGTAATGGATGCAAAAATTGATTACCCAGCAGCCTGCAA
TGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACAT
ATTAGTAGCACTAAAAACAGAAGGAGTTAATATTTATGGTGGACCTATTGCGCACAAAGC
TCTGGGATTTCCAAAAGCTGTTTCATTTCATCATGAGTATAGTTCTATGGCCTGCACTGT
TGAGTTTGTTGATGATGTTCAATCAGCAATTGACCATATTCATCGTTATGGAAGTGCTCA
TACAGATTGTATCGTCACTACAGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGTTGA
TAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGGATT
GGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGTTGA
AGGTCTCTTAACTACACGATGGATCTTGCGAGGGCGTGGGCAAGTGGTGAATGGTGACAA
GGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGC
CTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCT
TGTACAAGCATCTTATTGCGGCATCCCGATGGATTATTGATTTTGGGGGTCCCACTTTCA
AATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTC
TCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGT
AATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTATCTCCACTTTTTCAA
TCATGCTACGACATATCGCCGTGGATGCATATATTTGGTAGCATAGATTCCTCAGCTGAG
GCTCTACTTGAGCTTCCCCTTTTGTTCTGATAAACATCACTAATTGTGGGGTTCCGCTTT
CAGTTCTGAGAAGGTTCCGCTTTCAAACGTGACACTACAAATAAATTC

consensusID : consensus_12273#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 670
fasta sequence 
                              [GTCCAATCCGCCATTGCCCATATTCACCGTTATGGAAAGTGCCCATACAGATTGTATCCGNCACTACCAGATGATAAGGTAGCAGAGACTTTTC-ACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTCCGAGATTCTCTGATGGGNCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTNTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCNTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATANCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTAT-CTCCACTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU094664             [GTCCAATCCGCCATTGCCCATATTCACCGTTATGGAAAGTGCCCATACAGATTGTATCCGNCACTACCAGATGATAAGGTAGCAGAGACTTTTC ACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTCCGAGATTCTCTGATGGGNCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTNTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCNTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATANCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTAT CTCCACTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CA754084             [                                                               CTA CAGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGTTGATAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGGATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGTTGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCGTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTTCTGAGAACTTGTGTTACAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATTGCACATATACTAATTGCTATCCTCCACTTTTTCAATCCAAAAAAAAAAAAAA       ]




>consensus_12273#1
GTCCAATCCGCCATTGCCCATATTCACCGTTATGGAAAGTGCCCATACAGATTGTATCCG
NCACTACCAGATGATAAGGTAGCAGAGACTTTTCACGCAGAGTTGATAGTGCTGCTGTAT
TTCATAATGCAAGTCCGAGATTCTCTGATGGGNCTCGTTTTGGATTGGGTGCTGAGGTTG
GCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTNTTGAAGGTCTCTTAACTA
CACGATGGATCTTGCGAGGGCNTGGGCAAGTGGTGAATGGTGACAAGGATGTCGTGTACA
CCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTTAGCCTGTTCAGGAGTAG
GTGAATANCCTTTTAAGAATGGATTGACTACTTTATTTTGTCATCTTGTACAAGCATCTT
ATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCACTTTCAAATGTGACACCAAA
AATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTCTCCATGTAATAAGT
AAATTCAGTTCTGAGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTA
ACATCTGTGATTGCACATATACTAATTGCTATCTCCACTTTTTCAAAAAAAAAAAAAAAA
AAAAAAAAAA

consensusID : consensus_12273#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 632
fasta sequence 
                              [CATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGCTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGAGGATTCATCTGGTATATTCTGGGATAATGACAGTTTAGCAGGACTGTTGGCACTGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGAACAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGG]

[+] EMBL CA998314             [CATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGCTGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAGTCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGAGGATTCATCTGGTATATTCTGGGATAATGACAGTTTAGCAGGACTGTTGGCACTGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACTTTTGGAGAACAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTCTTGGCTTCAAATAGCGG]




>consensus_12273#2
CATGGCGAGCGTCGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAA
GGTGGGCACTGCAGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGC
TCTGTGCGAGCAGGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTC
AGGTGCTGTTGGAGTGGGGCGACAGCGACTTAGCTGGATGTCTCGTCATCTCAACTTCTT
GTCACCGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAG
TCATTATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGA
AAGGCTCCATATGAGGATTCATCTGGTATATTCTGGGATAATGACAGTTTAGCAGGACTG
TTGGCACTGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTAT
AGTGGTCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCAT
CAGCAAGAAATCACTTTTGGAGAACAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAA
GTGAAGGCTGCTGTCTTGGCTTCAAATAGCGG

consensusID : consensus_12273#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 261
fasta sequence 
                              [TTATTTTGTCNTCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCNCTTTCAAATNTGACNCCNAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTNTCCATGTAATAAGTAAATTCAGTTNTGNGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATNTGTGATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C97700               [TTATTTTGTCNTCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGGGGGTCCCNCTTTCAAATNTGACNCCNAAAATAAATTCATCAGTTCTGAGAGCAAGATTTTGGAGGTTCAGCTTNTCCATGTAATAAGTAAATTCAGTTNTGNGAACTTGTGTACCAACGCGCTATGTTGCTTGTAATGAGCGATACTAACATNTGTGATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12273#3
TTATTTTGTCNTCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGATTTTGG
GGGTCCCNCTTTCAAATNTGACNCCNAAAATAAATTCATCAGTTCTGAGAGCAAGATTTT
GGAGGTTCAGCTTNTCCATGTAATAAGTAAATTCAGTTNTGNGAACTTGTGTACCAACGC
GCTATGTTGCTTGTAATGAGCGATACTAACATNTGTGATTGCACAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CCCCTCTACTCGCGGCTGCGGCGGCAAGGCGGCGAGACGTGGGAGAGGGATTTACAGGTA 60
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GAGGGAGAGGGTGGAGGAGGAGAGGCTGAGGCTAGGAAGCGGTTTCGCCATGGCGAGCGT 120
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CGACCCGTCCCGGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGC 180
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AGTTGTCTCCAGACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCA 240
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GGTTAAGGAACTGAACTCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGG 300
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AGTGGGGCGACAGCGACTTAGGTACCGGAAGCTTGTCAATAGCAGCTTTGCTGATCTGCA 360
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AAAGCCACAGATGGAGTTAGATGGAAAGGCTTGTGCCGCTGTTGGTCAGAGTGGACTGAT 420
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GGCTCTTTACGATATGTTGTTTAACCAACTGGATGTCTCGTCATCTCAACTTCTTGTCAC 480
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CGACAGTGATTTTGAGAACCCAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAGTCATT 540
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ATTAGATCTTAAAGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGC 600
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TCCATATGAGGATTCATCTGGTATATTCTGGGATAATGACAGTTTAGCAGGACTGTTGGC 660
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ACTGGAACTGAAAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGG 720
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TCCACCAAGTGAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCA 780
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AGAAATCACTTTTGGAGACAAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAA 840
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GGCTGCTGTCTTGGCTTCAAATAGCGGCACACCTGTGGTTATTACAAGTGGGTTTGAAAA 900
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TCGGAGCATTCTTAAAGTTCTTCATGGGGAAAAAATTGGTACTCTCTTTCACAAGAATGC 960
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GAATTTGTGGGAATCATCTAAGGATGTTAGTACTCGTGAGATGGCTGTTGCCGCAAGAGA 1020
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TTGTTCAAGGCATCTACAGAATTTGTCATCAGAGGAACGAAAAAAGATATTGCTAGATGT 1080
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGCAGATGCTTTGGAGGCAAATGAGGATTTAATAAGGTCTGAGAATGAAGCTGATGTAGC 1140
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGCGGCCCAAGTTGCTGGATATGAGAAGCCTTTGGTTGCTAGATTGACTATAAAACCAGG 1200
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AAAGATAGCAAGCCTTGCAAAATCTATTCGTACCCTTGCAAATATGGAAGACCCTATAAA 1260
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CCAGATACTTAAAAAGACAGAGGTTGCTGATGATTTAGTTCTTGAGAAAACATCTTGCCC 1320
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ATTAGGTGTTCTCTTAATTGTTTTTGAGTCCCGACCTGATGCCTTGGTTCAGATTGCATC 1380
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TTTGGCAATTCGAAGTGGTAATGGTCTTCTCCTAAAAGGTGGAAAAGAAGCTATCAGATC 1440
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AAACACGATATTGCATAAGGTTATAACTGATGCTATTCCTCGTAATGTTGGTGAAAAACT 1500
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TATTGGCCTTGTTACAACTAGAGATGAGATCGCAGATTTGCTAAAGCTTGATGATGTCAT 1560
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGATCTTGTCATTCCAAGAGGAAGTAATAAGCTTGTCTCTCAAATCAAGGCGTCAACTAA 1620
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      GATTCCTGTTCTTGGGCATGCTGATGGTATATGCCACGTATATATTGACAAATCAGCTGA 1680
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CATGGATATGGCAAAACATATTGTAATGGATGCAAAAATTGATTACCCAGCAGCCTGCAA 1740
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGCAATGGAGACCTTACTAGTTCATAAGGATCTTATGAAGAGTCCAGGCCTTGACGACAT 1800
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ATTAGTAGCACTAAAAACAGAAGGAGTTAATATTTATGGTGGACCTATTGCGCACAAAGC 1860
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TCTGGGATTTCCAAAAGCTGTTTCATTTCATCATGAGTATAGTTCTATGGCCTGCACTGT 1920
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ----------------GTCCAATCCGCCATTGCCCATATTCACCGTTATGGAAAGTGCCC 44
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGAGTTTGTTGATGATGTTCAATCAGCAATTGACCATATTCATCGTTATGGAA-GTGCTC 1979
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ATACAGATTGTATCCGNCACTACCAGATGATAAGGTAGCAGAGACTTTTC-ACGCAGAGT 103
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ATACAGATTGTATC-GTCACTAC-AGATGATAAGGTAGCAGAGACTTTTCTACGCAGAGT 2037
consensus_12273#2      -------------------------------------CATGGCGAGCGTCGACCCGTCCC 23
                                                                                   

consensus_12273#1      TGATAGTGCTGCTGTATTTCATAATGCAAGTCCGAGATTCTCTGATGGGNCTCGTTTTGG 163
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGATAGTGCTGCTGTATTTCATAATGCAAGTACGAGATTCTCTGATGGGGCTCGTTTTGG 2097
consensus_12273#2      GGAGCTTCGTGAGGGACGTGAAGCGCGTCATCATCAAGGTGGGCACTGCAGTTGTCTCCA 83
                                                                                   

consensus_12273#1      ATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTNT 223
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      ATTGGGTGCTGAGGTTGGCATAAGCACAGGGCGTATCCATGCCCGTGGACCAGTGGGTGT 2157
consensus_12273#2      GACAAGATGGAAGATTGGCTTTGGGCAGGGTTGGAGCTCTGTGCGAGCAGGTTAAGGAAC 143
                                                                                   

consensus_12273#1      TGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCNTGGGCAAGTGGTGAATGGTGA 283
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      TGAAGGTCTCTTAACTACACGATGGATCTTGCGAGGGCGTGGGCAAGTGGTGAATGGTGA 2217
consensus_12273#2      TGAAC-TCTTTAGGATACGAAGTGATTTTGGTCACCTCAGGTGCTGTTGGAGTGGGGCGA 202
                                                                                   

consensus_12273#1      CAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTT 343
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CAAGGATGTCGTGTACACCCATAAGAGTCTTCCTTTGCAATGAGGTCAAATGCTCCTTTT 2277
consensus_12273#2      CAGCGACTTAGC-TGGATGTCTCGTCATCTCAACTTCTTGTCACCGACAGTGATTTTGAG 261
                                                                                   

consensus_12273#1      AGCCTGTTCAGGAGTAGGTGAATANCCTTTTAAGAATGGATTGACTACTTTATTTTGTCA 403
consensus_12273#3      -------------------------------------------------TTATTTTGTCN 11
consensus_12273#0      AGCCTGTTCAGGAGTAGGTGAATATCCTTTTAAGAATGGATTGACTACTTTATTTTGTCA 2337
consensus_12273#2      AACC----CAAAGTTCCGGGAGCAACTCACTGAAACTGTTGAGTCATTATTAGATCTTAA 317
                                                                        ***  *  *  

consensus_12273#1      TCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGAT--------TTTGGGGG 455
consensus_12273#3      TCTTGTACAAGCATCTTATTGCGGCATTCCGATGGATTATTGAT--------TTTGGGGG 63
consensus_12273#0      TCTTGTACAAGCATCTTATTGCGGCATCCCGATGGATTATTGAT--------TTTGGGGG 2389
consensus_12273#2      AGTTATACCAATATTTAATGAAAATGATGCCATCAGCACTAGAAAGGCTCCATATGAGGA 377
                         ** *** *  ** * **          * **      * **         * ** ** 

consensus_12273#1      TCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAA-GATTTTGG 514
consensus_12273#3      TCCCNCTTTCAAATNTGACNCCNAAAATAAATTCATCAGTTCTGAGAGCAA-GATTTTGG 122
consensus_12273#0      TCCCACTTTCAAATGTGACACCAAAAATAAATTCATCAGTTCTGAGAGCAA-GATTTTGG 2448
consensus_12273#2      TTCATCTGGTATATTCTGGGATAATGACAG-TTTAGCAGGACTGTTGGCACTGGAACTGA 436
                       * *  **   * **         *  * *  ** * ***  ***   ***  *    ** 

consensus_12273#1      AGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTT--CTGAGAACTTGTGTACCAACGC 572
consensus_12273#3      AGGTTCAGCTTNTCCATGTAATAAGTAAATTCAGTT--NTGNGAACTTGTGTACCAACGC 180
consensus_12273#0      AGGTTCAGCTTCTCCATGTAATAAGTAAATTCAGTT--CTGAGAACTTGTGTACCAACGC 2506
consensus_12273#2      AAGCTGATCTCCTTATTCTGCTCAGTGATGTGGATGGGTTGTATAGTGGTCCACCAA-GT 495
                       * * * * **  *   * *  * *** *  *   *    **   * * **  ***** * 

consensus_12273#1      GCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATT-GCACATATACTAATTGCTA 631
consensus_12273#3      GCTATGTTGCTTGTAATGAGCGATACTAACATNTGTGATT-GCACAAAAAAAAAAA---- 235
consensus_12273#0      GCTATGTTGCTTGTAATGAGCGATACTAACATCTGTGATT-GCACATATACTAATTGCTA 2565
consensus_12273#2      GAACCATCATCAAAAATCATACACACTTATATTAAAGAAAAGCATCAGCAAGAAATCACT 555
                       *     *       *** *   * *** * **    **   ***     *  **      

consensus_12273#1      TCT------CCACTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAA--------------- 670
consensus_12273#3      -------------------AAAAAAAAAAAAAAAAAAAAAAAAAA--------------- 261
consensus_12273#0      TCT------CCACTTTTTCAATCATGCTACGACATATCGCCGTGGATGCATATATTTGGT 2619
consensus_12273#2      TTTGGAGAACAATCTCGTGTAGGTAGAGGAGGCATGACAGCAAAAGTGAAGGCTGCTGTC 615
                                           *            *                          

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      AGCATAGATTCCTCAGCTGAGGCTCTACTTGAGCTTCCCCTTTTGTTCTGATAAACATCA 2679
consensus_12273#2      TTGGCTTCAAATAGCGG------------------------------------------- 632
                                                                                   

consensus_12273#1      ------------------------------------------------------------
consensus_12273#3      ------------------------------------------------------------
consensus_12273#0      CTAATTGTGGGGTTCCGCTTTCAGTTCTGAGAAGGTTCCGCTTTCAAACGTGACACTACA 2739
consensus_12273#2      ------------------------------------------------------------
                                                                                   

consensus_12273#1      ---------
consensus_12273#3      ---------
consensus_12273#0      AATAAATTC 2748
consensus_12273#2      ---------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)