cluster # 12286

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Oryza sativa
cluster # 12286 cluster # 12286 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12286#0 length = 1565 sequences # 10
consensusID : consensus_12286#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1565
fasta sequence
                              [TTCTTCCATCCATCCATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT-GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC-GGACGACGAGCGGC-GGGTACAAGT-GCGG-TGAGTGGC-TGCAG-TCCGACAGGATC-TGGTCGGGGCGGCTCCGCGTGGTGTCGTGCGGCGACCGCTGCGAGATCCGCCTCGAGGACCCGGCCTCCGGCGACCTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG-AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT-CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT-CCGCT-CGAATCACATGGTGATAATGACTTGCTAGCATCCA-CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGTTTTGAGTTGTACTCCAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK065629             [TTCTTCCATCCATCCATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TGCAG TCCGACAGGATC TGGTCGGGGCGGCTCCGCGTGGTGTCGTGCGGCGACCGCTGCGAGATCCGCCTCGAGGACCCGGCCTCCGGCGACCTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCAACCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGT                                  ]
[+] EMBL OSR23651A            [               ATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTNCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTNAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACANGATNCCGNCGC GGACGACGAGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL C91757               [                            ATTCAAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGNCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TTCAN TCCGACAAGATCTTGGTCGGGGCGGTTCC CGTTGTGTCGTGCGGCGACCGTTGCGAGATCCcgct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU055841             [                                AAGAACCCCAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCTNGCTGGTGGTGCGGGAAGTGTCGGTGTACAAGATTCCGCCGCGGGACGACGANCGGCGGGGTACAAGTNCCGGTTAATTGGCTTGNAGTTCCGACAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU093532             [                                        CAATCCAAACCCCCCTCAACTCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCCGGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCTCCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGGGGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCT GCTGGTGGTGCGGGAGGTGTCGGTGTACAAGATCCCGCCGC GGACGACGAGCGGC GGGTACAAGT GCGG TGAGTGGC TGCAG TCCGACAGGATC TGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK100161             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTCTTCGCCGCCTGCTTCGTCCTCCCAGGCCAGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCGAGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCG AGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAGGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCA                                                                                          ]
[+] EMBL AU093533             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGCCTTCGTCGGNCTCGGGTTCGGCGNAGCGGAACGAGGCGTTCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACNTCAAGAGGGAGCACGAGAAGGAGGCGGCCGACGGCGGC CCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCCACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATAAGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAAAACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTT CAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAANNGGAAAAGAAAATTGTGTAACTGA                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU055842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CACCGGGTTCCAGCTGGGAAGCTTCGATCTCCTCTTCCACCTCCACCAAATGACCCT CTGCCGC AGGATGAATTCTGGCTCTAATGCTGGAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTGCTATGAAGCAAAACCTACCGTCATCGACAGCGTCGGCGCAAACAAAAAGCACNGGTGCTGGTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCNGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCTCCGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCNTTAATCAAAAGGTTTTGAGTTGTNCTCCAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU029765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCACAGGTNCTGGTTGGGCAGCATTTTGACAATGAGTCTNCCATCTGCTGTTGATAACCTTTTCTCAGGAAAAGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAANCCTGTATCCCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCA CTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACACTGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTGCATTCTTGTCTTTGTGCATTAATCAAAAGGTTTTGAGTTGTACTCCAAAAAAA            ]
[+] EMBL BI794868             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTAT CCGCT CGAATCACATGGTGATAATGACTTGCTAGCATCCACCTTGGTACTCGAAAAAATAAAAGATTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAAGTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCGCATATGAAACCAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACCCTGTTATGAATGCGGCAGCTTATGTCACTGATGCC AATTTTCTGTAAAACACGAGCCCTGCATTCTTGTCTTTGTGCATTAATC AAAGGTTTTGAGTTGTACTCCAAAA               ]




>consensus_12286#0
TTCTTCCATCCATCCATCCATCCATTTGATTCAAGAACCCCAATCCAAACCCCCCTCAAC
TCGCCCCAAAATCCCTAACTCCCGAAGAAATCGCCGAGAAATATCTCTCATCTTGCCGCC
GGATCGAGCCCGATTCCCTGCACCGAGAGAGAGGTGAGGCGATCCGGATCTATCTGATCT
CCTCGTTCGTCGCCATTGTTGCAAGTGAAGTGAAGTGGGAGCAGGGATCATCCATGGCGG
GGGTGGGGGTGGAGGAGGAGGAGGCGTTCGAGCACACGCTGCTGGTGGTGCGGGAGGTGT
CGGTGTACAAGATCCCGCCGCGGACGACGAGCGGCGGGTACAAGTGCGGTGAGTGGCTGC
AGTCCGACAGGATCTGGTCGGGGCGGCTCCGCGTGGTGTCGTGCGGCGACCGCTGCGAGA
TCCGCCTCGAGGACCCGGCCTCCGGCGACCTCTTCGCCGCCTGCTTCGTCCTCCCAGGCC
AGCGCGAGGCCGCCGTCGAGACCGTGCTCGACTCCTCCCGATACTTCGTGCTCCGGATCG
AGGATGGCAGGGGGAAGCACGCCTTCGTCGGGCTCGGGTTCGGCGAGCGGAACGAGGCGT
TCGACTTCAACGTCGCGCTGTCGGATCACGAGAAGTACGTCAAGAGGGAGCACGAGAAGG
AGGCGGCCGACGGCGGCGCCGGCGGCGGCGAGGAGAACGACGACGGGCAGATTGACATCC
ACCCGGCGGTCAATCGCCGGCTCAAGGAAGGTGAAACCATCAGGATAAATGTAAAAAATA
AGCCATCAACTGGAAGTGGTATGCTTTCATCAGCTGGTTTATCTGGAGGGGCCAGTGCAA
AACCCAAGGCAAGCATGCTCCTTGCGCCGCCACCGGGTTCAGCTGGGAAGCTTCGATCTC
CTCTTCCACCTCCACCAAATGACCCTGCTGCCGCAAGGATGAATTCTGGCTCTAATGCTG
GAATCAGGGCTCCAAAAGAACCCGCCAAGAGAAATAGCGACGCCTTTTCAGATCTTTCTG
CTATGAAGCAAAACCTACCGTCATCGACAGAGTCGGCGCAAACAAAAAGCACAGGTGCTG
GTTGGGCAGCATTTTGACAATGAGTCTGCCATCTGCTGTTGATAACCTTTTCTCAGGAAA
AGGAAAAGAAAATTGTGTAACTGAAAAAAAAGAAATCCCTTGGAGGAAGCCTGTATCCGC
TCGAATCACATGGTGATAATGACTTGCTAGCATCCACTTGGTACTCGAAAAAATAAAAGA
TTTACAGGATGATGTTGTTATTCATCGTGCGATGCCACATGGATTCCTGGAGCTTTGGAA
GTCTGAAAAATATGAGTATGGCTTTCCTTGTTTGTCATATTTGTGTTGTCAGATTTTTCG
CATATGAAACAAGAATCATACTGACCTCATTGTGTTGTACCCTTAAAGATTTGAGAACAC
TGTTATGAATGCGGCAGCTTATGTCACTGATGCCAAATTTTCTGTAAAACACGAGCACTG
CATTCTTGTCTTTGTGCATTAATCAAAAGGTTTTGAGTTGTACTCCAAAAAAAAAAAAAA
AAAAA
clustalw multiple alignements is not computed in this case