cluster # 12323

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Oryza sativa
cluster # 12323 cluster # 12323 Sequences # 10 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12323#0 length = 1253 sequences # 7

consensus_12323#1 length = 406 sequences # 1
consensus_12323#2 length = 337 sequences # 2

consensusID : consensus_12323#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1253
fasta sequence

                              [CAGCAGAAACTCTAGTGATCACAAGCTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCCCTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGTCGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGGCGGTCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGTTCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCTCCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGGACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCGCAGTACTACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCACCACCGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTACCCCGATTCCTCTTCTTCTATAACCATTTTT]

[+] EMBL AK067179             [CAGCAGAAACTCTAGTGATCACAAGCTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCCCTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGTCGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGGCGGTCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGTTCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCTCCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGGACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCGCAGTACTACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCACCACCGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTACCCCGATTCCTCTTCTTCTATAACCATTTTT]
[+] EMBL CB659172             [            accTGATCACAAGCTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCCCTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGTCGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGGCGGTCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGTTCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCTCCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK058790             [                                   CTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCCCTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGTCGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGGCGGCCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGTTCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCATCACCGGCGGCCCGGCCCTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCTCCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGGACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCGCAGTACTACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCACCAC                                                                                                        ]
[+] EMBL AU101732             [                                                                                                                                                                                                                                                                                         GTCGGGAGCTGGGCGACGTTCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGGATGGCGCCGGCGCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACNGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACNCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU174166             [                                                                                                                                                                                                                                                                                                                                                                      GCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCTCCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BE229426             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              cgaGTCGGCGACGAGMHCCTCGAYTCCACCGTCTCCGAGAWCCTCCCAVHVCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAA SGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGGACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCARTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGSCCATGGCGCAGTACTACGCCTACATCTCCAAGAAGTGAACAGCAGCGGYTACCTGTTYTTTCCAAC                                                                                                                                                                                                                                                  ]
[-] EMBL CF335326             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGGCGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGGACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGTTCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCGCAGTACTACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCACCACCGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTAaaaaa                          ]




>consensus_12323#0
CAGCAGAAACTCTAGTGATCACAAGCTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAG
AAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCC
CTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGT
CGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGG
CGGTCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGT
TCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGC
CCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGT
ACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCG
TCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCA
CGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGG
TGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCA
TCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCT
CCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGG
CGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGG
ACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGT
TCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCGCAGTACT
ACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGA
GAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCT
AAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAG
GTGCACCACCGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTA
GGTGCAAATCAGCACTTCCTTACCCCGATTCCTCTTCTTCTATAACCATTTTT

consensusID : consensus_12323#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 406
fasta sequence

                              [CTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGAAGACCCTCCTCTCCCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAAATGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCC]

[+] EMBL CF335325             [CTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAATGAAGACCCTCCTCTCCCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAAATGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCC]




>consensus_12323#1
CTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAAT
GAAGACCCTCCTCTCCCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGG
GCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTC
CGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCAT
CACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGA
GAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAG
CCAAATGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCC

consensusID : consensus_12323#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 337
fasta sequence

                              [GCTCGTCGTCGGCGGCCTGCTCGTCATCGCNTTCGTCGTGCCCATGGCGCAGTATACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCA-CCACGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU032535             [GCTCGTCGTCGGCGGCCTGCTCGTCATCGCNTTCGTCGTGCCCATGGCGCAGTATACGCCTACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCA CCACGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU174167             [                                                                                                                 nAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTNCAGTAAATTTGCTCAGGAGATGGCTAAATCTCCCGGTTTTCTGTCGGAATTTTANAGGCGAAACAGAGAATTATNATNAACACAGGTGCACCCCCGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCAAATCAGCACTTCCTTTAAAAAAAAA            ]




>consensus_12323#2
GCTCGTCGTCGGCGGCCTGCTCGTCATCGCNTTCGTCGTGCCCATGGCGCAGTATACGCC
TACATCTCCAAGAAGTGAACAGCAGCGGCTACCTGTTCTTTCCAACAAAAAAAGAGAGAA
AAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAGGAGATGGCTAAATC
TCCCGGTTTTCTGTCGGAATTTTAGAGGCGAAACAGAGAATTATGATGAACACAGGTGCA
CCACGTGCCGGTTAATTTTTATTGTAGTAGCATAACTGAGGCACTGAGCAATTAGGTGCA
AATCAGCACTTCCTTAAAAAAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12323#0      CAGCAGAAACTCTAGTGATCACAAGCTCAGCTCAGCTCAGCTCCCTCCTTCTCCCCGGAG 60
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      AAGCAGCGGCCGGCACGGCAGCAATGGAGACCCTCCTCTCCCCCTCCACATTGCTCTCCC 120
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CTCTCCGCGGCTCCAAGAAGAAGCCGGCGAGCCCCGCCGCGTCGGCGTCGTCGTCGTCGT 180
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CGTCTCCCGCCAGGTCCGTCGTCTCCTGCGCGCTCAGGAGGCAGCAGCCGCCGCCGCAGG 240
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CGGTCGCCGCTTGGCGCGGAGACGGCGGCCGCGGTGGCGGCGTCGGGAGCTGGGCGACGT 300
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      TCTTGCAGCACGGCCTGGCCGCGGCGGCGCTGTCGCTGGCAATCAGCATGGCGCCGGCGC 360
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCGGGCCGCCGGAGGACACGT 420
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      ACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGTCCGACGTGAAGCGGCTCG 480
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      TCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCATCACCGTGCGCAAGCTCA 540
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGGAGAAGTGGTACCCGACGG 600
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      TGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCAGCCAGAAGGAGGGCGCCA 660
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      TCACCGGCGGCCCGGCCTTCGTGCAGGCCGTCGGCGACGAGATCCTCGACTCCACCGTCT 720
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CCGAGAACCTCCCAGTGCTGGCGACGGACGAGAAGTACAACGAGGCAATCTACACGACGG 780
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      CGAAGCGGCTGGCGGCGGCGATCGACGGGCTGCCGGACCCCGGCGGGCCGACGTTCAAGG 840
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      ACAACAAGAGGGAGTCCAACTTCAAGACGAAGGAGGAGACGGAGGAGAAGCGCGGCCAGT 900
consensus_12323#2      ------------------------------------------------------------
consensus_12323#1      ------------------------------------------------------------
                                                                                   

consensus_12323#0      TCACGCTCGTCGTCGGCGGCCTGCTCGTCATCGCCTTCGTCGTGCCCATGGCG-CAGTAC 959
consensus_12323#2      ----GCTCGTCGTCGGCGGCCTGCTCGTCATCGCNTTCGTCGTGCCCATGGCG-CAGTA- 54
consensus_12323#1      CTCAGCTCAGC-TCAGCTCCCTCCTTCTCCCCGGAGAAGCAGCGGCCGGCACGGCAGCAA 59
                           ****  * ** **  *** **  **  **     *  * * **    ** *** * 

consensus_12323#0      T--ACGCCTACATCTCCAAGAAGTGAACAGCAGCG-----GCTACCTGTTCTTTCCAACA 1012
consensus_12323#2      T--ACGCCTACATCTCCAAGAAGTGAACAGCAGCG-----GCTACCTGTTCTTTCCAACA 107
consensus_12323#1      TGAAGACCCTCCTCTCCCCCGCGCCGGCCGTGGCGTCGGAGTTCGACGTGCTGAACGGCG 119
                       *  *  **  * *****     *    * *  ***     * *    ** **   *  * 

consensus_12323#0      AAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAG- 1071
consensus_12323#2      AAAAAAGAGAGAAAAAATGAGCAGCATATGGTGCTGCTCTGTACAGTAAATTTGCTCAG- 166
consensus_12323#1      GGCCGCCGGAGGACACGTACGTGGTGGACGACGCCGGCGTGCTCAGCCGCGTGACCAAGT 179
                               *** * *  *  *  *   * *  ** *   **  ***     *  *  ** 

consensus_12323#0      -------GAGATGGCTAAATCTC---CCGGTTTTCTGTCGGAATTTTAGAGGCGAA---- 1117
consensus_12323#2      -------GAGATGGCTAAATCTC---CCGGTTTTCTGTCGGAATTTTAGAGGCGAA---- 212
consensus_12323#1      CCGACGTGAAGCGGCTCGTCCGCGACCTCGAGTCCCGCAAGAACATCAGGATCAACTTCA 239
                              **   ****    * *   *  *  * * *   ***  * **   * *     

consensus_12323#0      -------ACAGAGAATTATGATGAACACAGGTGCACCACCGT--GCCGGTTAATTTTTAT 1168
consensus_12323#2      -------ACAGAGAATTATGATGAACACAGGTGCACCAC-GT--GCCGGTTAATTTTTAT 262
consensus_12323#1      TCACCGTGCGCAAGCTCACGAGCAAAGCTGACGCGTTCGAGTACGCGGACCAAGTGCTGG 299
                               *  *   * * **  **  * *  **      **  ** *   ** *  *  

consensus_12323#0      TGTAGTAGCAT--AACTGAGGCACTGAGCAATTAGGTGCAAATCAGCAC-TTCCTTACCC 1225
consensus_12323#2      TGTAGTAGCAT--AACTGAGGCACTGAGCAATTAGGTGCAAATCAGCAC-TTCCTTAAAA 319
consensus_12323#1      AGAAGTGGTACCCGACGGTGGAGGAGGGCAACAACAAGGGCATCGTCGTGCTCGTCACCA 359
                        * *** * *    ** * **    * ****  *   *   ***  *    ** * *   

consensus_12323#0      CGATTCCTCTTCTTCTATAACCATTTTT------------------- 1253
consensus_12323#2      AAAAAAAAAAAAAAAAAA----------------------------- 337
consensus_12323#1      GCCAAATGGAGGGCGCCATCACCGGCGGCCCGGCCTTCGTGCAGGCC 406