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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12338#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2131 fasta sequence
[GTTCGGCCCAGGGGATGGACGCTTGTCTCCTCCTCTCTCCTCCTCGCCGCCTCCTCTCCTCGCGTGCCTAGCTTCCCTTCCCTTCCCTTCCCTTCTTCCCTACTCCTCCCACTCCACTCCACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATGGCGGCGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGCACCTCCCCGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTTGCCGCCGCGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCCACTCCATACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTATGTAGGTTTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCTGCTGCAAGGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTACTTGAAAACTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAGGCTGCACTTGCAAACCGTGTACAGTTAAATGTTCTAGGCTACCCGATGCGTCCGAATGAGAAGGAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCATCATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAGTCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCAAGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGCTCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGTCAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCTGTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAGTTTGGTCCTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACATCACCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGAATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAAATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCCTCCTCGGCCTTTCCTCATGCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGAAGCTGTACAGGTCCTTGTC-CATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCTTCATCATGTATCACATTCAGGCAGG-AAAATGTTCTTGCTTG-CCCCTCCCCGCCCCAATTCCTGCATGCCCC--GTGAAAATAAATGGGGCAACCA-TTCTTATTT-ATCCCT-ACCATATACACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA-GGCA-TTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACA-ACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCA-TTGTTCTCGACAAAAAAAAAA]
[+] EMBL AK111511 [GTTCGGCCCAGGGGATGGACGCTTGTCTCCTCCTCTCTCCTCCTCGCCGCCTCCTCTCCTCGCGTGCCTAGCTTCCCTTCCCTTCCCTTCCCTTCTTCCCTACTCCTCCCACTCCACTCCACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATGGCGGCGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGCACCTCCCCGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTTGCCGCCGCGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCCACTCCATACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTATGTAGGTTTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCTGCTGCAAGGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTACTTGAAAACTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAGGCTGCACTTGCAAACCGTGTACAGTTAAATGTTCTAGGCTACCCGATGCGTCCGAATGAGAAGGAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCATCATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAGTCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCAAGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGCTCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGTCAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCTGTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAGTTTGGTCCTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACATCACCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGAATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAAATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCCTCCTCGGCCTTTCCTCATGCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGAAGCTGTACAGGTCCTTGTC CATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCTTCATCATGTATCACATTCAGGCAGG AAAATGTTCTTGCTTG CCCCTCCCCGCCCCAATTCCTGCATGCCCC GTGAAAATAAATGGGGCAACCA TTCTTATTT ATCCCT ACCATATATACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA GGCA TTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACA ACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCAACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGATCTGGGTC ]
[+] EMBL CB640085 [ TCTCCTCGCGTGCCTAGCTTCCCTTCCCTTCCCTTCCCTTCTTCCCTACTCCTCCCACTCCACTCCACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATGGCGGCGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGCACCTCCCCGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTTGCCGCCGCGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCCACTCCATACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTATGTAGGTTTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCTGCTGCAAGGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTACTTGAAAACTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAGGCTGCA ]
[+] EMBL CB096261 [ nggacgagACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAGTTTGGTCCTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACATCACCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGAATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAAATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCTTCCTCGGCCTTTCCTCATGCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGAAGCTGTACAGGTCCTTGTC CATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCTTCATCATGTATCACATTCAGGCAGGAAAAATGGTCTTGCTCGNCCCTTCCCGGCCCAAATTCCTGCATGCCCCCGGNGAAAATAAATGGGGCAACCATTTCTTANTT A ]
[+] EMBL BF430446 [ AACATCACCAAGAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGAATATTGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAAATACCCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCCTCCTCGGCCTTTCCTCATGCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGAAGCTGTACAGGTCCTTGTC CATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCTTCATCATGTATCACATTCAGGCAGG AAAATGTTCTTGCTTG CCCCTCCCCGCCCCAATTCCTGCATGCCCC GTGAAAATAAATGGGGCAACCA TTCTTATTT ATCCCT ACCATATATACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA GGCA TTGGGGAGTAAGCGCAAGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACA ACGGAAATAATGCTCT ]
[+] EMBL BI808222 [ AGTAATTATCTCCCACAAATTCAAAGAGCTGAACCTGTACAGGTCCTTGTCACATCCTTTTTCTGCTTCTCTGAACCACCACACACCGGTGCTTCATCATGTATCACATTCAGGCAGG AAAATGTTCTTGCTTG CCCCTCCCCGCCCCAATTCCTGCATGCCCC GTGAAAATAAATGGGGCAACCA TTCTTATTT ATCCCT ACCATATACACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGT CCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA GGCA TTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACA ACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCATTTGTTCTCGACAAAAAAA ]
[+] EMBL BI808267 [ TTTCTGCTTCTCTGAACCACCACACACCGGTGCTTCATCATGTATCACATTCA GCAGG AAAATGTTCTTGCTTG CCCCTCCCCGCCCCAATTCCTGCATGCCCC GTGAAAATAAAT GGGCAACCA TTCTTATTT ATCCCT ACCATATACACACACACAAGATACACTCACCTCCTGACACTCGGTTC GCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCT CAGTGGACAAAGCTTACC AACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA GCA TTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAAC ACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCA TTGTTCTCGACAAAAAAAAAA]
[+] EMBL BM038197 [ ccgTCCTGCATGCCCC GTGAAAATAAATGGGGCAACCA TTCTTATTT ATCCCT ACCATATACACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCCAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTA GCCA TTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACA ACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGNNCTGGGTCA TTGTTCTCGACAAAAAAAA ]
[+] EMBL BQ906712 [ CTTATTTGATCCCTGACCATATACACACACACAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTTGTAGTTATACAGGTGGCCTGCAGTGGACAAAGCTTACCAAACTGACTGTATTGGGGATTCTGTTTCGTTTTGCTCTTCTTCCTTTCTACGGCACTTGGGGAGTAAGCGCAGGACTTGCTGCTTGTGCAAGTGTGCATGTTGAAAACACACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCA TTGTTCTCGACATTGAAAAAA]
consensusID : consensus_12338#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 770 fasta sequence
[TCCTTTATCGTAATATCTGTTCTCTACCTCTTAGCTTGCATGCAAGATTAGCTTTCATTAACTTGCAGTTTATTACTGCAGAATGAGAAGGAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCATCATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAGTCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCAAGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGCTCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGTCAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCTGTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGTAAGGTTTTTTTTTTATGTTGAAATTTCTCAAGCCAAATTTTGTGAGGACCATTCCATTTATAGTGG]
[+] EMBL CB651473 [TCCTTTATCGTAATATCTGTTCTCTACCTCTTAGCTTGCATGCAAGATTAGCTTTCATTAACTTGCAGTTTATTACTGCAGAATGAGAAGGAATGTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCATCATCCACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAGTCTGCAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCAAGATCTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGCTCTTCGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGTCAGAGTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCTGTTCCAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGTAAGGTTTTTTTTTTATGTTGAAATTTCTCAAGCCAAATTTTGTGAGGACCATTCCATTTATAGTGG]
consensusID : consensus_12338#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 281 fasta sequence
[TGGCCACTTCCCAAGTTGGAACAAAAGCTTTACCCACAAACTGGACCTTTATTTGGGGATTCTGTTTTCTGGTTTTTGCTCTTCTTCTTTCTAGGCCACTTGGGGAGTAAGCGCCAGGACTTGCTGCTTGTGACACAGTGTGCATGTTGAAAACAACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCATTGTTCTCGACAAAAAAAAAA]
[+] EMBL BI810953 [TGGCCACTTCCCAAGTTGGAACAAAAGCTTTACCCACAAACTGGACCTTTATTTGGGGATTCTGTTTTCTGGTTTTTGCTCTTCTTCTTTCTAGGCCACTTGGGGAGTAAGCGCCAGGACTTGCTGCTTGTGACACAGTGTGCATGTTGAAAACAACGGAAATAATGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAATAAAAGAATCGGCCATGGCTGCGCGAGCTGGGTCATTGTTCTCGACAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12338#0 GTTCGGCCCAGGGGATGGACGCTTGTCTCCTCCTCTCTCCTCCTCGCCGCCTCCTCTCCT 60
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CGCGTGCCTAGCTTCCCTTCCCTTCCCTTCCCTTCTTCCCTACTCCTCCCACTCCACTCC 120
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 ACGCGCACCTCGCCGCGTCCCTGATCTGATTGATTGATGCCGGGGCGGCCGTGATGGCGG 180
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CGGGAGCAGGAGCGGGCGGCGGGGGCGGGGAGGGCGACAGCAACGGGGGAGGCACCTCCC 240
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CGGGTGGCGTGTCGGCGGCGGCGCCGGCGATCGGGCCCCACCACCTCGGGGTTGCCGCCG 300
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CGGAAGAAGCAATGTGGCAAATGACTTTAGGAGGAGGAGAGTCTATGGAGTCCACTCCAT 360
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 ACCCTGAGCGGATAGGAGAGCCAGACTGCAGTTATTATATGAGGACTGGACTATGTAGGT 420
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 TTGGGATGACCTGCAAATTCAATCACCCCCCAAATAGAAAACTGGCTGTTGCTGCTGCAA 480
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 GGATGAATGGAGAGTATCCTTATAGAGTTGGTCAACCTGAGTGTCAATACTACTTGAAAA 540
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CTGGAACGTGCAAGTTTGGTGCAACATGCAAGTTTCATCACCCCAGGGAGAAGGCTGCAC 600
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 TTGCAAACCGTGTACAGTTAAATGTTCTAGGCTACCCGATGCGTCCGAATGAGAAGGAAT 660
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 GTGCTTACTACTTAAGAACAGGGCAGTGTAAATTTGCAAGCACATGTAAGTTTCATCATC 720
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CACAGCCCTCTAATACAATGGTTGCTGTACGGAACTCTATGTATTCACCTGGACAGTCTG 780
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CAACCTCTCCTGGTCAACATACTTATCCTGGGGCCGTAACAAACTGGACCTTGTCAAGAT 840
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CTGCATCATTTATTGCAAGCCCCAGGTGGCCTGGCCATTCAGGCTATGCACAAGTAATCG 900
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 TTCCCCAGGGCCTTGTTCAAGTTCCAGGGTGGAATCCTTATGCTGCACAAATGGGCTCTT 960
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CGTCTCCAGATGACCAGCAACGAACACCTGTAACCACTCAATACTATGGCTCACGTCAGA 1020
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 GTGAAACAGGTGGTATGGGAGATCATGGAATGTATCAGTCATACCAAGGAGGCTCTGTTC 1080
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CAGTCGGTGTTTACACAGTACAAGGGGAAAATATATTTCCTGAGAGACCTGATCAACCAG 1140
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 AGTGTCAATTCTACATGAAAACTGGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATC 1200
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 ACCCCAAGGAGCGACTGGTACCTGCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCAC 1260
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 TACGCCCGGGAGAACCTGTCTGCACATTCTATTCTCGTTACGGGATCTGCAAGTTTGGTC 1320
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CTAATTGCAAATTTGACCATCCTATGGGAACCCTTATGTATGGAAGTGCAACATCACCAA 1380
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 GAGGTGATGTGTCATCTATGCATTATCAGTTGTCACCCTCACCAGGGCATCCAGGAATAT 1440
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 TGCTTGATGGAGGCTCTGGAAGGTCTCACCGGGTTCCTCAGTCTGATTCCCAGCAAATAC 1500
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ------------------------------------------------------------
consensus_12338#0 CCTCTGGCGATGGGAATGCCGAGAGAGAGGCATCATAAGCCCTCCTCGGCCTTTCCTCAT 1560
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ----------------------------------------------------------TC 2
consensus_12338#0 GCTACCTCCCATTCTTGACTCTTCAGTAATTATCTCCAACAAATTCAAAGAGCTGAAGCT 1620
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 CTTTATCGTAATATCTGTTCTCTACCTCTTAGCTTGCATGCAAGATTAGCTTTCATTAAC 62
consensus_12338#0 GTACAGGTCCTTGTCCATCCTTTTTCTGCTTCTCTGAATCACCACACACCGGTGCTTCAT 1680
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 TTGCAGTTTATTACTGCAGAATGAGAAGGAATGTGCTTACTACTTAAGAACAGGGCAGTG 122
consensus_12338#0 CATGTATCACATTCAGGCAGGAAAATGTTCTTGCTTGCCCCTCCCCGCCCCAATTCCTGC 1740
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 TAAATTTGCAAGCACATGTAAGTTTCATCATCCACAGCCCTCTAATACAATGGTTGCTGT 182
consensus_12338#0 ATGCCCCGTGAAAATAAATGGGGCAACCATTCTTATTTATCCCTACCATATACACACACA 1800
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 ACGGAACTCTATGTATTCACCTGGACAGTCTGCAACCTCTCCTGGTCAACATACTTATCC 242
consensus_12338#0 CAAGATACACTCACCTCCTGACACTCGGTTCGGCGAATGATGTGCCTTGATCCCTCTGTT 1860
consensus_12338#2 ----------------------------------------------------------TG 2
consensus_12338#1 TGGGGCCGTAACAAACTGGACCTTGTCAAGATCTGCATCATTTATTGCAAGCCCCAGGTG 302
*
consensus_12338#0 GTA--GTTATACAGGTGGCCTGCAGT-GGACAAAGCTTACCAAACTGACT---GTA--TT 1912
consensus_12338#2 GCC--ACTTCCCAAGTTGGA-ACAA--AAGCTTTACCCACAAACTGGACC---TTTATTT 54
consensus_12338#1 GCCTGGCCATTCAGGCTATGCACAAGTAATCGTTCCCCAGGGCCTTGTTCAAGTTCCAGG 362
* ** * ** * * * * *
consensus_12338#0 GGGGATTCTGTTTCGT-------TTTGCTCTTCTTCCTTTCT-AGGCA-TTGGGGA---- 1959
consensus_12338#2 GGGGATTCTGTTTTCTGGTT---TTTGCTCTTCTTCTTTCTA-GGCCACTTGGGGA---- 106
consensus_12338#1 GTGGAATCCTTATGCTGCACAAATGGGCTCTTCGTCTCCAGATGACCAGCAACGAACACC 422
* *** ** * * * * ******* ** ** * *
consensus_12338#0 -GTAAGCGC-AGGACTTGCTGCTTGTG-CA-AGTGTGCATGTTGAAAACAACGGAAATAA 2015
consensus_12338#2 -GTAAGCGCCAGGACTTGCTGCTTGTGACACAGTGTGCATGTTGAAAACAACGGAAATAA 165
consensus_12338#1 TGTAACCACTCAATACTATGGCTCACGTCAGAGTG---AAACAGGTGGTATGGGAGATCA 479
**** * * * *** * ** **** * * * *** ** *
consensus_12338#0 TGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAA 2075
consensus_12338#2 TGCTCTGCCTTAATTGTAATAATTGTAATTTATGTTCTACCGACTGAATTATTTGTTCAA 225
consensus_12338#1 TGGAATGTATCAGTCATACCAA--GGAGGCTCTGTTCCAGTCGGTGTTTACACAGTACAA 537
** ** * * * ** ** * * * ***** * ** * ** ***
consensus_12338#0 TAAAAGAAT-------CGGCCATGGCTGCGCGAGCTGGGTCATTGTTCTCGACAAAAAAA 2128
consensus_12338#2 TAAAAGAAT-------CGGCCATGGCTGCGCGAGCTGGGTCATTGTTCTCGACAAAAAAA 278
consensus_12338#1 GGGGAAAATATATTTCCTGAGAGACCTGATCAACCAGAGTGTCAATTCTACATGAAAACT 597
* *** * * * *** * * * * ** **** * ****
consensus_12338#0 AAA--------------------------------------------------------- 2131
consensus_12338#2 AAA--------------------------------------------------------- 281
consensus_12338#1 GGAGACTGTAAGTTTGGTGCTGTTTGCAAGTTTCATCACCCCAAGGAGCGACTGGTACCT 657
*
consensus_12338#0 ------------------------------------------------------------
consensus_12338#2 ------------------------------------------------------------
consensus_12338#1 GCTCCAAACTGTGCATTGAATTCACTTGGTCTTCCACTACGCCCGGTAAGGTTTTTTTTT 717
consensus_12338#0 -----------------------------------------------------
consensus_12338#2 -----------------------------------------------------
consensus_12338#1 TATGTTGAAATTTCTCAAGCCAAATTTTGTGAGGACCATTCCATTTATAGTGG 770
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||