cluster # 1234

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1234 cluster # 1234 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1234#0 length = 980 sequences # 2

consensusID : consensus_1234#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 980
fasta sequence

                              [CTTGGAGGATGGAGATAATGAAGCTGTGTGTTCAAGTTGTTTATTCAGCTTCTGCACGCTTTGTAGAGACCGCCGTCATGTTGGGGACAAATGTATGTCGCCTAAAGAAAAACTACTTATTTTGGAGAAACGCCAAGAAGCAGGAAAATTACAGGGAGATCAGCATAAGTTTCTGGAGGAACTACGCAGCATCAAGGCAATTATGAAGGACTCAAAAATGTGCCCGCGGTGCAAGATGGCTATCCA-TAAGATAGAAGGATGCAATAAGATGTCATGTAGTAATTGTGGCCAGTACTTCTGCTACCAATGTAACAGTGCAATTGAAGGTTATGAACATTTCAGGGGTTCATGTAAGCTTTTCCCTCAGGAAGAGCTTGATAGATGGAACATGCAAATGAATCCGAGGGTCCAGCGTCAAAATGTTGCACAAGTGCAAGCTGAAATGTTTCGGCAATTTGCTCATCCATGCCCTACTTGCCGGCAACCATGTCCGAAGATGGGAAACAACAACCACGTCTTCTGTTGGGCATGCCAGAAGCACTTCTGTGCACTGTGCCGGAAAACTGTCCACAAGACCTCACAGCATTTTGGTCCAAAAGGATGCAAACAGTATACTGCAGATCCCTGAGAGTTCTTCTCGTATTACGCATCACCAAAAATACCTCGACGACAATGCTATTTCCAGAGGTTCTGTGCGCGTATGCGAATACATATACTCCTTGCACCAGGGTGTATTTTCTTCGAGATTCCAAGGTTTGGCCGTGAGTCTTGTTTTAAGTCTCCTGCTTCCTTGTACCAGTAAAAGCTCAACCATTTATATTGGAGGGAATTTTGTGCCGCTCATTCATTTAGCTCCGGACTTGTTATTGAGAATACTGTGTATATTCAGGATGCCTGTCCTCTTACATCAGGAACAGAAACATGACAACAATCTATGGAAAAATTCTTGCAAGATTCTTTTCGAGATGCCAGATAGTGTT]

[+] EMBL AK058695             [CTTGGAGGATGGAGATAATGAAGCTGTGTGTTCAAGTTGTTTATTCAGCTTCTGCACGCTTTGTAGAGACCGCCGTCATGTTGGGGACAAATGTATGTCGCCTAAAGAAAAACTACTTATTTTGGAGAAACGCCAAGAAGCAGGAAAATTACAGGGAGATCAGCATAAGTTTCTGGAGGAACTACGCAGCATCAAGGCAATTATGAAGGACTCAAAAATGTGCCCGCGGTGCAAGATGGCTATCCA TAAGATAGAAGGATGCAATAAGATGTCATGTAGTAATTGTGGCCAGTACTTCTGCTACCAATGTAACAGTGCAATTGAAGGTTATGAACATTTCAGGGGTTCATGTAAGCTTTTCCCTCAGGAAGAGCTTGATAGATGGAACATGCAAATGAATCCGAGGGTCCAGCGTCAAAATGTTGCACAAGTGCAAGCTGAAATGTTTCGGCAATTTGCTCATCCATGCCCTACTTGCCGGCAACCATGTCCGAAGATGGGAAACAACAACCACGTCTTCTGTTGGGCATGCCAGAAGCACTTCTGTGCACTGTGCCGGAAAACTGTCCACAAGACCTCACAGCATTTTGGTCCAAAAGGATGCAAACAGTATACTGCAGATCCCTGAGAGTTCTTCTCGTATTACGCATCACCAAAAATACCTCGACGACAATGCTATTTCCAGAGGTTCTGTGCGCGTATGCGAATACATATACTCCTTGCACCAGGGTGTATTTTCTTCGAGATTCCAAGGTTTGGCCGTGAGTCTTGTTTTAAGTCTCCTGCTTCCTTGTACCAGTAAAAGCTCAACCATTTATATTGGAGGGAATTTTGTGCCGCTCATTCATTTAGCTCCGGACTTGTTATTGAGAATACTGTGTATATTCAGGATGCCTGTCCTCTTACATCAGGAACAGAAACATGACAACAATCTATGGAAAAATTCTTGCAAGATTCTTTTCGAGATGCCAGATAGTGTT]
[+] EMBL AA752375             [                               cgagGTTGTTTATTCAGCTTCTGCACGCTTTGTAGAGACCGTCGTCATGTTGGGGACAAATGTATGTCGCCTGAAGAAAAACTACTTATTTTGGAGAAACGCCAAGAAGCAGGAAAATTACAGGGAGATCAGCATAAGTTTCTGGAGGAACTACGCAGCATCAAGGCAATTATGAAGGACTCAAAAATGTGCCCGCGGTGCAAGATGGCTATCCAWHAMGATAGAAGGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_1234#0
CTTGGAGGATGGAGATAATGAAGCTGTGTGTTCAAGTTGTTTATTCAGCTTCTGCACGCT
TTGTAGAGACCGCCGTCATGTTGGGGACAAATGTATGTCGCCTAAAGAAAAACTACTTAT
TTTGGAGAAACGCCAAGAAGCAGGAAAATTACAGGGAGATCAGCATAAGTTTCTGGAGGA
ACTACGCAGCATCAAGGCAATTATGAAGGACTCAAAAATGTGCCCGCGGTGCAAGATGGC
TATCCATAAGATAGAAGGATGCAATAAGATGTCATGTAGTAATTGTGGCCAGTACTTCTG
CTACCAATGTAACAGTGCAATTGAAGGTTATGAACATTTCAGGGGTTCATGTAAGCTTTT
CCCTCAGGAAGAGCTTGATAGATGGAACATGCAAATGAATCCGAGGGTCCAGCGTCAAAA
TGTTGCACAAGTGCAAGCTGAAATGTTTCGGCAATTTGCTCATCCATGCCCTACTTGCCG
GCAACCATGTCCGAAGATGGGAAACAACAACCACGTCTTCTGTTGGGCATGCCAGAAGCA
CTTCTGTGCACTGTGCCGGAAAACTGTCCACAAGACCTCACAGCATTTTGGTCCAAAAGG
ATGCAAACAGTATACTGCAGATCCCTGAGAGTTCTTCTCGTATTACGCATCACCAAAAAT
ACCTCGACGACAATGCTATTTCCAGAGGTTCTGTGCGCGTATGCGAATACATATACTCCT
TGCACCAGGGTGTATTTTCTTCGAGATTCCAAGGTTTGGCCGTGAGTCTTGTTTTAAGTC
TCCTGCTTCCTTGTACCAGTAAAAGCTCAACCATTTATATTGGAGGGAATTTTGTGCCGC
TCATTCATTTAGCTCCGGACTTGTTATTGAGAATACTGTGTATATTCAGGATGCCTGTCC
TCTTACATCAGGAACAGAAACATGACAACAATCTATGGAAAAATTCTTGCAAGATTCTTT
TCGAGATGCCAGATAGTGTT

clustalw multiple alignements is not computed in this case