cluster # 12448

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Oryza sativa
cluster # 12448 cluster # 12448 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12448#0 length = 869 sequences # 10
consensusID : consensus_12448#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 869
fasta sequence
                              [NGNACGGTTGGGTACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC-TTGGATTCTCCCA-GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA-GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAAT]

[+] EMBL OSS14921A            [NGNACGGTTGGGNACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA G TCATGG CTCAATAG TGGGAG AAGTTCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK066780             [      gagtcaTACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ]
[+] EMBL AK062162             [            TACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTC      TTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ]
[+] EMBL OSS12478A            [               ACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCAGGGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGNTCAACCACCAATCAAGGTTCATGGGCTCAATAGCTGGGGGCAAGTTCAG                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS13261A            [               ACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGCTTTGGGTTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF303347             [                        gATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAG                                                                                                                                                                                                   ]
[+] EMBL CB679831             [                         ATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCTGCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTCCATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATCAGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTTCACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAATGGACCTTTTGATGGCCTGC TTGGATTCTCCCA GGGTGCAACTCTTTCTGCTCTTTTGATAGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCT                                               ]
[-] EMBL CA762772             [                                                                                                                                                                                                                                                                                                                                                         ccTTATGCTCTTNTGATGGGTTCCCAAGCCCAGGGCAAAGTGCTGAATGATCATCCCCCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTACCCT TAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCACAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTTTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAAATGTGGAGAAGCCATTTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTTTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTACCCAAAT]
[-] EMBL CB679832             [                                                                                                                                                                                                                                                                                                                                                                            GTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAA GTTCATGGTCTCAATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGATCAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGAGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAAT]
[+] EMBL AU174016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCCTAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTNTGAGTGGAGCTCAAGCATCCTGGAAGACATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATNTGAGGGTAATACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACTGACAGTCTTGACACTGTNTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTAGTCCGTCATGAAACTCGATCTATCCAAA ]




>consensus_12448#0
NGNACGGTTGGGTACACGATTGCGCATGGAGCTGGACAAGAAATTTAAGGTGCTTTGCCT
GCACGGCTTCCGGACAAGTGGGAGTTTTCTGAAGAAGCAAATCAGCAAATGGAATCCTTC
CATCTTCCAACAATTTGACATGGTCTTCCCTGATGGCATATTCCCAGCTGGAGGGAAATC
AGAGATAGAAGGCATATTTCCCCCACCCTACTTTGAGTGGTTTCAGTTCAACAAGGACTT
CACTGAATACACAAATCTGGATGAGTGCATTTCATACCTGTGTGATTACATGGTGAAAAA
TGGACCTTTTGATGGCCTGCTTGGATTCTCCCAGGGTGCAACTCTTTCTGCTCTTTTGAT
AGGTTACCAAGCACAGGGCAAAGTACTGAATGATCATCCACCAATCAAGTTCATGGTCTC
AATAGCTGGGAGCAAGTTCAGGGACCCAAGCATATGCAATGTAGCCTATAAGGATCCGAT
CAAGGTGAAATCAGTGCATTTCATTGGAGAGAAGGATTGGCTCAAAGTGCCTTCCGAGGA
GCTGGCCGCTGCCTTTGAGGACCCTGTCATCATAAGACATCCCCAGGGCCACACTGTCCC
TAGGCTTGATGAGGCAAGTGTGAAGCAGCTTTCTGAGTGGAGCTCAAGCATCCTGGAAGA
CATCAAGAATGCAGATGATGTTGCCAAGGCTTCAATTGTGGAGAAGCCATCTGAGGGTAA
TACCGTGGCAGAGTCCGGTGAAAACCTGGTGGAGCAAATTGCAGCTTGAGTATGGTAACT
GACAGTCTTGACACTGTCTGGAGGCTGGAGCTGATTGCTGCTTCAAATTAAACCGGATTA
GTCCGTCATGAAACTCGATCTATCCAAAT
clustalw multiple alignements is not computed in this case