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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12495#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2473 fasta sequence
[TTACTAAAAAAGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCTCTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCGTCGCAGAGCAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAA-GGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAAGAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACTATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGATGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGTTGCAATCCCTGCGGTAGCCCCTATGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGATGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGGCCGAAGTTGGAGGCTTGTAAAGCATCCTTCGGTAGGTCCATGTTGATGGAGGATTTTGTCACATGGTCTACATGGTGATCAATGTGGCAACATTTCCATCAAACTTTGGTTGAAATTCAGGGAGAGCTTCCATAATGATATACTACTACTATTTTGGCGATACTGAGTGGTGAGCTGTATGGCTGTACCTTCAACATACTTTGATGAGGTAGTGAATCAGGTAAGTAGGCATATTGTTCATTGTCAGGTGTCAGTAGACAGTACTTATACAATATACTCGTATTTGCTAATTGTTTTCCGTGACGTAAACTGTATATCATAAGTACTTCCTGCTACGCGATTTGACTCTGACAAGTGTTAGCACATATGTGGTAATGCAGAAGTTATGTACAGTTTCTTATTAACAGACAACAGTTATGAAGGAGACATGATTCCATATCTGGCCTTGTTGCTGCTGCTGATGGTTTGGTCATTTATGTGCATGTCCTTTTACATGATTGTTCTTGGTGTATATATAATTAATCTGGTTCATTGTTCTGTTTCTTCTTTTGTCTTAAAGAAATTTTATATCATGTCCTGTATAGTGATAACATTCAGTTTTCTTCCTGTGCATATCGTGGCGCTTTAGATCACTGGTATTCTCTGAGAATATCACAATAATGATTCTACATATGAAATGAATATTGGACCATTCAATACACCTAGCCTATGTGTCAACTGGAACATTTTTTTTCTATCTTTACAAATGCAAGAACATGTAATGGGATGGATTTTTTTTTTGTCACATATAAAGTAGTCACATACAAAGGTTGGCAAATAACAAGCTACCAAAGCAGCAACGTGGGAAAATATAACTGAGGAGATGCAGCAACGTGTGTAAAATATAATGGAGGAGAGGAGGATCACTGTGGTGCACAAAAGCTTTTTTTTTTTTTGTTGTTGTTGTGAAAACTAATTACAACTTTTTATAGCATGTATGTATGTACACAATAAGAGGGTGAAATGTAAAGCATTAACTGAACAGCTGATGTATACATGACTTGTTTCTGAAGCAGTATGGAATATAATCCTC]
[+] EMBL CF297596 [TTACTAAAAAAGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCTCTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCGTCGCAGAGCAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAAGGGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACGGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGC ]
[+] EMBL AK068229 [ CGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCGTCGCAGAGCAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAA GGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAAGAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACTATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGATGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGTTGCAATCCCTGCGGTAGCCCCTATGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGATGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGGCCGAAGTTGGAGGCTTGTAAAGCATCCTTCGGTAGGTCCATGTTGATGGAGGATTTTGTCACATGGTCTACATGGTGATCAATGTGGCAACATTTCCATCAAACTTTGGTTGAAATTCAGGGAGAGCTTCCATAATGATATACTACTACTATTTTGGCGATACTGAGTGGTGAGCTGTATGGCTGTACCTTCAACATACTTTGATGAGGTAGTGAATCAGGTAAGTAGGCATATTGTTCATTGTCAGGTGTCAGTAGACAGTACTTATACAATATACTCGTATTTGCTAATTGTTTTCCGTGACGTAAACTGTATATCATAAGTACTTCCTGCTACGCGATTTGACTCTGACAAGTGTTAGCACATATGTGGTAATGCAGAAGTTATGTACAGTTTCTTATTAACAGACAACAGTTATGAAGGAGACATGATTCCATATCTGGCCTTGTTGCTGCTGCTGATGGTTTGGTCATTTATGTGCATGTCCTTTTACATGATTGTTCTTGGTGTATATATAATTAATCTGGTTCATTGTTCTGTTTCTTCTTTTGTCTTAAAGAAATTTTATATCATGTCCTGTATAGTGATAACATTCAGTTTTCTTCCTGTGCATATCGTGGCGCTTTAGATCACTGGTATTCTCTGAGAATATCACAATAATGATTCTACATATGAAATGAATATTGGACCATTCAATACACCTAGCCTATGTGTCAACTGGAACATTTTTTTTCTATCTTTACAAATGCAAGAACATGTAATGGGATGGATTTTTTTTTTGTCACATATAAAGTAGTCACATACAAAGGTTGGCAAATAACAAGCTACCAAAGCAGCAACGTGGGAAAATATAACTGAGGAGATGCAGCAACGTGTGTAAAATATAATGGAGGAGAGGAGGATCACTGTGGTGCACAAAAGCTTTTTTTTTTTTTGTTGTTGTTGTGAAAACTAATTACAACTTTTTATAGCATGTATGTATGTACACAATAAGAGGGTGAAATGTAAAGCATTAACTGAACAGCTGATGTATACATGACTTGTTTCTGAAGCAGTATGGAATATAATCCTC]
[+] EMBL CF303878 [ GGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCGTCGCAGAGCAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAA GGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTACGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTT GCCATGAG ]
[+] EMBL CB627778 [ GCAACCTTTCCATCAAACT TTGAAATTCAGGGAGAGCTTCCATAATGATATACTACTACTATTTTGGCGATACTGAGTGGTGAGCTGTACGGCTGTACCTTCAACATACTTTGATGAGGTAGTGAATCAGGTAAGTAGGCATATTGTTCATTGTCAGGTGTCAGTAGACAGTACTTATACAATATACTCGTATTTGCTAATTGTTTTCCGTGACGTAAACTGTATATCATAAGTACTTCCTGCTACGCGATTTGACTCTGACAAGTGTTAGCACATATGTGGTAATGCAGAAGTTATGTACAGTTTCTTATTAACAGACAACAGTTATGAAGGAGACATGATTCCATATCTGGCCTTGTTGCTGCTGCTGATGGTTTGGTCATTTATGTGCATGTCCTTTTACATGATTGTTCTTGGTGTATATATAATTAATCTGGTTCATTGTTCTGTTTCTTCTTTTGTCTTAAAGAAATTTTATATCATGTCCTGTATAGTGATAACATTCAGTTTTCTTCCTGTGCATATCGTGGCGCTTTAGATCACTGGTATTCTCTGAGAATATCACAATAATGATTCTACATATGAAATGAATATTGGACCATTCAATACACCTAGCCTATGTGTCAACTGGAACATTTTTTTTCTATCTTTACAAATGCAAGAACATGTAATGGGATGGA TTTTTTTTTGTCACATATAAAGTAGTCACATACAAAGGTTGGCAAATAACAAGCTACCAAAGCAGCAACATGGGAAAATATAACTGAGGAGATGCAGCAACGTGTGTAAAATATAATGGAGGAGAGGAGGATCACTGTGGTGCACAAAAG ]
consensusID : consensus_12495#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2057 fasta sequence
[AGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCTCTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCG-TCGCAGAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAAGGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGC-AATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAAGAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACTATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGATGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGGTAGATGCTGTTGATTCCCAATGCTTAGAGCTGGGCGAAAAATACATGCATGATT-CCTT-AAGTAAAAGAGCAAATGGCTTTCAT-AAAACAAATTTGGCAGCAGT-AAAAGCTAATTTTGATTATCTGGATCCTGCTGTAACAACTCAAGATAGTGATACTGATAGTGTCGTTTCCTCTGTTGGTAGTTGCAATCCCTGCGGTAGCCCCTA-TGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGA-TGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAATGCTACCTTTGCCCCAATTAACTCAAGGCTTTCTTCTTTAATGGAACTGTCTATTTAACTTCATAGTATCTTGTAATTGTTTTATGCTGCTGGTGTTAGAACTTTTATTTAATGATGATGGCATATATTACACCACTTGATAAGTTTCTATGATTCCCTTTTGTGTTTTACAGTTAAACTGATTATAATTCAATAATATGATATCCAATGAAATTTGTTCTTGAGGTTGTCAACTTCAGCTATCAACTATTATGTTTGCATTGTGTTACTTTAGCGATCCTATTTGACCATGTTGAGTTGTCCATCCTTTGGAATTCTTGTGCCAAAAGGTACATATACTGCTGCACTGTTGGTAGAATACCCTTTAAAACACTACATTATGTGTAACTTATTATCTGAACAACATCCTCCCCTCTTATCCTATCATTATCCTGATACTGATAGATGACTACTA]
[+] EMBL AK120670 [AGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCTCTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCG TCGCAGAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAAGGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGC AATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAAGAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACTATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGATGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGGTAGATGCTGTTGATTCCCAATGCTTAGAGCTGGGCGAAAAATACATGCATGATT CCTT AAGTAAAAGAGCAAATGGCTTTCAT AAAACAAATTTGGCAGCAGT AAAAGCTAATTTTGATTATCTGGATCCTGCTGTAACAACTCAAGATAGTGATACTGATAGTGTCGTTTCCTCTGTTGGTAGTTGCAATCCCTGCGGTAGCCCCTA TGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGA TGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAATGCTACCTTTGCCCCAATTAACTCAAGGCTTTCTTCTTTAATGGAACTGTCTATTTAACTTCATAGTATCTTGTAATTGTTTTATGCTGCTGGTGTTAGAACTTTTATTTAATGATGATGGCATATATTACACCACTTGATAAGTTTCTATGATTCCCTTTTGTGTTTTACAGTTAAACTGATTATAATTCAATAATATGATATCCAATGAAATTTGTTCTTGAGGTTGTCAACTTCAGCTATCAACTATTATGTTTGCATTGTGTTACTTTAGCGATCCTATTTGACCATGTTGAGTTGTCCATCCTTTGGAATTCTTGTGCCAAAAGGTACATATACTGCTGCACTGTTGGTAGAATACCCTTTAAAACACTACATTATGTGTAACTTATTATCTGAACAACATCCTCCCCTCTTATCCTATCATTATCCTGATACTGATAGATGACTACTA]
[+] EMBL C72546 [ TCTTTTATTTCTTCTTCCACTTCTCGATTTTCTCTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGC GCGTTCGCAGAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAAGGTGGAGGTGTTGCAGAAGGGGGGTGCG CATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACANCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTNCGGAAAGGGTGCCAAGGAAGGCAAATGA ]
[+] EMBL AK070020 [ ATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTTCTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCGGCG TCGCAGAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAAGGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGTTTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGTGGCTGCGGAAAGGGTGCCAAGGAAGGC AATGAGACCTTTGCGCCCACCCTTGGATGGTATTGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGCGGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCTGGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATGGGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAGATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAAGAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACTATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGATGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGGTAGATGCTGTTGATTCCCAATGCTTAGAGCTGGGCGAAAAATACATGCATGATT CCTT AAGTAAAAGAGCAAATGGCTTTCAT AAAACAAATTTGGCAGCAGT AAAAGCTAATTTTGATTATCTGGATCCTGCTGTAACAACTCAAGATAGTGATACTGATAGTGTCGTTTCCTCTGTTGGTAGTTGCAATCCCTGCGGTAGCCCCTA TGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGA TGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAATGCTACCTTTGCCCCAATTAACTCAAGGC ]
[+] EMBL AU093997 [ GATTCCCTTNAAGTAAAAGAGCAAATGGCTTTCATAAAAACAAATTTGNCAGCAGTAAAAAGCTAATTTTGATTATCTGGATCCTGCTGTAACAACTCAAGATAGTGATACTGATAGTGTCGTTTCCTCTGTTGGTAGTTGCAAT CCTGCGGTAGCCCCTA TGGATCAACACATCCTCAAGAGTATGATTGTGCAGATATTTGTAGTAGGNCTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGA TGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAATGCTACCTTTGCCCCAAaaa ]
[+] EMBL BI806861 [ TTGCAATCCC GCGGTAGCCCCTATTGGATCAACACATCCTC AGAGTATGATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGAGTGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAATGCTACCTTTGCCCC ATTAAaaaaaaaa ]
[-] EMBL CF297597 [ ATTGTGCAGATATTTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGACTGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCTGAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGA TGGCATTATATGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATTGAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCATTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACTTATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGATGTTCTGTATTAACCATGGAAACAGGTTGTATGATAGATTTACCATAACTTCTCAAAaa ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12495#0 TTACTAAAAAAGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCT 60
consensus_12495#1 ----------AGAAACTAATTCCCTGCTCTTTTATTTCTTCTTCCACTTCTCGATTTTCT 50
**************************************************
consensus_12495#0 CTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTT 120
consensus_12495#1 CTCCTCGTCAAATCCGCGCCTCGTAGAGGGAGGCAAGAATCGAGGGGTCCGGTGTTTTTT 110
************************************************************
consensus_12495#0 CTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCG 180
consensus_12495#1 CTGCGGGATCGTGGGGGAATTTTTCCTCGGATTTTTCCGTGCTCGTTTCCGCCGCGGGCG 170
************************************************************
consensus_12495#0 GCGTCGCAGAGCAGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAA 240
consensus_12495#1 GCGTCGCAG---AGTGTTTGAGAAATAATACGAGTCAATGAAATTCCGCAAAGGGACAAA 227
********* ************************************************
consensus_12495#0 GGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGT 300
consensus_12495#1 GGTGGAGGTGTTGCAGAAGGGGGGTGCGCCATTGGGTTCCTGGAGGCCTGCTGAGATTGT 287
************************************************************
consensus_12495#0 TTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGT 360
consensus_12495#1 TTCTGGCAATGGACACACCTATCTTGTAAGCTATGGCTCATGTCCAACTCAGGGTAGTGT 347
************************************************************
consensus_12495#0 GGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTAT 420
consensus_12495#1 GGCTGCGGAAAGGGTGCCAAGGAAGGCAATGAGACCTTTGCGCCCACCCTTGGATGGTAT 407
************************************************************
consensus_12495#0 TGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGC 480
consensus_12495#1 TGTATGCTGGGTCAAAGGTGAGATTGCAGAAGTCTTTGACAGCTACACATGGAAGGTTGC 467
************************************************************
consensus_12495#0 GGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCT 540
consensus_12495#1 GGAAGTGGTGAGATTGCTTGGTTTTAGTTACTATCTCGTCAGGCTCCTTGGATCCTCCCT 527
************************************************************
consensus_12495#0 GGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATG 600
consensus_12495#1 GGAGTTGAAAGTACATGCATCCAATCTTAGGATAAGGCAGCTGTGGGAAGATGGCAAATG 587
************************************************************
consensus_12495#0 GGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAG 660
consensus_12495#1 GGTTGCTATTCCAAAGGATTCTGCAAGATTCCCTGGTGATTCACCTAGAAGCCAGTTGAG 647
************************************************************
consensus_12495#0 ATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAA 720
consensus_12495#1 ATGTGGAAAAGTTGGCCATGAGTTGGTGCATACTTCAAGGGACAACCGTCTTCTACTGAA 707
************************************************************
consensus_12495#0 GAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACT 780
consensus_12495#1 GAAAAAGAAAGTATATGAGGGCAATACTTCTCAGGGCTTGAAGAGAAAATCATCTGCACT 767
************************************************************
consensus_12495#0 ATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGA 840
consensus_12495#1 ATCAGCTTTCCCCATGCAGTACAGTGAAGTAAGTAAGAGATTTCAGACATCACATAGAGA 827
************************************************************
consensus_12495#0 TGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAG-------- 892
consensus_12495#1 TGGAAGGTGCCTGCCTGTTGTTCCTGGAGGTTCTCTTCATTTGATGGATAAGGTAGATGC 887
****************************************************
consensus_12495#0 ------------------------------------------------------------
consensus_12495#1 TGTTGATTCCCAATGCTTAGAGCTGGGCGAAAAATACATGCATGATTCCTTAAGTAAAAG 947
consensus_12495#0 ------------------------------------------------------------
consensus_12495#1 AGCAAATGGCTTTCATAAAACAAATTTGGCAGCAGTAAAAGCTAATTTTGATTATCTGGA 1007
consensus_12495#0 ---------------------------------------------------------TTG 895
consensus_12495#1 TCCTGCTGTAACAACTCAAGATAGTGATACTGATAGTGTCGTTTCCTCTGTTGGTAGTTG 1067
***
consensus_12495#0 CAATCCCTGCGGTAGCCCCTATGGATCAACACATCCTCAAGAGTATGATTGTGCAGATAT 955
consensus_12495#1 CAATCCCTGCGGTAGCCCCTATGGATCAACACATCCTCAAGAGTATGATTGTGCAGATAT 1127
************************************************************
consensus_12495#0 TTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGAC 1015
consensus_12495#1 TTGTAGTAGGACTGATGATGCTGAAGTTTCTGTATCTGGAAGAGAATCGTTTAGTAGGAC 1187
************************************************************
consensus_12495#0 TGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCT 1075
consensus_12495#1 TGATGATGCTGAAGCTTCTGTATCAGGAAGAGAATCACCTGCTCCTGTTAATGATGGTCT 1247
************************************************************
consensus_12495#0 GAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGATGGCATTATA 1135
consensus_12495#1 GAAAGAGAAAACCCATTTGCTTGAGTTACATGCTTATCGTGCAACACTGATGGCATTATA 1307
************************************************************
consensus_12495#0 TGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATT 1195
consensus_12495#1 TGCGTCTGGGTCAATTAGCTGGGAGCAAGAGGCTATGATGACTAATCTGAGGCTTACATT 1367
************************************************************
consensus_12495#0 GAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCA 1255
consensus_12495#1 GAACATCTCAACTGATGAACATTTATCTGAGTTAAGGAGTTTGGTTTCCTCTGAAGTTCA 1427
************************************************************
consensus_12495#0 TTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACT 1315
consensus_12495#1 TTCTAGATAGTCATATGAAACAGTAGGTGTCTGTCTTGGTGGTTATGTAGGCATATCACT 1487
************************************************************
consensus_12495#0 TATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGAT 1375
consensus_12495#1 TATTTTACAATTGCAGAGTCATGGCCAGTGTTGAAACCACATCCAGTTGGAGTACTTGAT 1547
************************************************************
consensus_12495#0 GTTCTGTATTAACCATGGAAACAGGGCCGAAGTTGGAGGCTTGTAAAGCATCCTTCGGTA 1435
consensus_12495#1 GTTCTGTATTAACCATGGAAACAGGTTGTATGATAGA----TTTACCATAACTTCTCAAA 1603
************************* * * * ** * ** * * * *
consensus_12495#0 GGTCCATGTTGATGGAGGATTTTGTCACATGGTCTACATGGTGATCAATGTGGCAACATT 1495
consensus_12495#1 TGCTACCTTTGCCCCAA----TTAACTCAAGGCTTTCTTCTT---TAATGGAAC----TG 1652
* *** * ** * ** ** * * * * **** * *
consensus_12495#0 TCCATCAAACTTTGGTTGAAATTCAGGGAGAGCTTCCATAATGATATACTACTACTATTT 1555
consensus_12495#1 TCTATTTAACTTCA--TAGTATCTTGTAATTGTTTT-ATGCTGCTGG--TGTTAGAACTT 1707
** ** ***** * ** * * * ** ** ** * * ** * **
consensus_12495#0 TGGCGATACTGAGTGGTGAGCTGTATGGCTGTACCTTCAACATACTTTGATGAGGTAGTG 1615
consensus_12495#1 TTATT-TAATGA-TGATGGCATATATTACACCAC--TTGATAAGTTTCTATGAT-TCCCT 1762
* ** *** ** ** * *** * ** * * * ** **** *
consensus_12495#0 AATCAGGTAAGTAGGCATATTGTTCATTGTCAGGTGTCAGTAGACAGTACTTATACAATA 1675
consensus_12495#1 TTTGTGTTTTACAGTTAAACTGATTATAATTCAATAATAT--GATATCCAATGAAATTTG 1820
* * * ** * * ** * ** * * * ** * * * *
consensus_12495#0 TACTCGTATTTGCTAATTGTTTTCCGTGACGTAAACTGTATATCATAAGTACTTCCTGCT 1735
consensus_12495#1 TTCTTGAGGTTGTCAACT-TCAGCTATCAACTATTATGTTTGCATTGTGTTACTTTAGCG 1879
* ** * *** ** * * * * * ** *** * * ** * **
consensus_12495#0 ACGCGATTTGACTCTGACAAGTGTTAGCACATATGTGGTAATGCAGAAGTTATGTACAGT 1795
consensus_12495#1 ATCCTATTTGACCATGTTGAGTT---GTCCATCCTTTGGAATTCTTGTGCCA---AAAGG 1933
* * ******* ** *** * *** * * *** * * * * **
consensus_12495#0 TTCTTATTAACAGACAACAGTTATGAAGGAGACATGATTCCATATCTGGCCTTGTTGCTG 1855
consensus_12495#1 TACATAT--ACTG-CTGCACTGTTGGTAGA-ATACCCTTTAAAACACTACATTATG--TG 1987
* * *** ** * * ** * ** ** * * ** * * * ** * **
consensus_12495#0 CTGCTGATGGTTTGGTCATTTATGTGCATGTCCTTTTACATGATTGTTCTTGGTGT-ATA 1914
consensus_12495#1 TAACTTATTATCTGAACAAC-ATCCTCCCCTCTTATCCTATCATTATCCTGATACTGATA 2046
** ** * ** ** ** * ** * * ** *** * ** * ***
consensus_12495#0 TATAATTAATCTGGTTCATTGTTCTGTTTCTTCTTTTGTCTTAAAGAAATTTTATATCAT 1974
consensus_12495#1 GATGACTACTA------------------------------------------------- 2057
** * ** *
consensus_12495#0 GTCCTGTATAGTGATAACATTCAGTTTTCTTCCTGTGCATATCGTGGCGCTTTAGATCAC 2034
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 TGGTATTCTCTGAGAATATCACAATAATGATTCTACATATGAAATGAATATTGGACCATT 2094
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 CAATACACCTAGCCTATGTGTCAACTGGAACATTTTTTTTCTATCTTTACAAATGCAAGA 2154
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 ACATGTAATGGGATGGATTTTTTTTTTGTCACATATAAAGTAGTCACATACAAAGGTTGG 2214
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 CAAATAACAAGCTACCAAAGCAGCAACGTGGGAAAATATAACTGAGGAGATGCAGCAACG 2274
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 TGTGTAAAATATAATGGAGGAGAGGAGGATCACTGTGGTGCACAAAAGCTTTTTTTTTTT 2334
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 TTGTTGTTGTTGTGAAAACTAATTACAACTTTTTATAGCATGTATGTATGTACACAATAA 2394
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 GAGGGTGAAATGTAAAGCATTAACTGAACAGCTGATGTATACATGACTTGTTTCTGAAGC 2454
consensus_12495#1 ------------------------------------------------------------
consensus_12495#0 AGTATGGAATATAATCCTC 2473
consensus_12495#1 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||