cluster # 12538

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Oryza sativa
cluster # 12538 cluster # 12538 Sequences # 10 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_12538#0 length = 1478 sequences # 10
consensusID : consensus_12538#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1478
fasta sequence
                              [TACAACTACTTTCTTTTTCATGATTTGTCTTACTCGTGGAGATCATTGGTCTTGGCCTGTTTGGATTAGGCTTGAGTAAATTCAGTAAACATGTTTGTTAGAATTAACATGTATAGATGTTAATCTTACTTCTCTTGTGTGCTTTGCAGATCTGTTGTATGTTCTATCTGACTTGCCAAGGCAACTTAACTTTATTGAGCATACCAGTGACATCGGATGGAAGGAGTATCAGAGGGCAAAGCCGGTGATAATTGACCCTGGGCTATACAGCCTGCAGAAATCTGATGTTTTCTGGATTACAGAGAAAAGAAGTGTTCCAACCGCATTCAAGCTCTTCACTGGCTCGGCGTGGATGATGCTTACTCATCAATTTATTGAATACTGCATATGGGGTTGGGACAATCTTCCCAGGACGGTCCTGATGTATTATGCCAATTTTCTTTCTTCACCAGAGGGTTACTTCCACACAGTCATTTGCAATGTCCCAGAGTTCCGCAACACCACTGTGAATCATGATCTACATTTCATTTCTTGGGACAACCCACCAAAGCAACACCCTCACTACCTCACCCTCAATGACTTTGACGGTATGGTTAACAGCAATGCTCCCTTTGCAAGAAAGTTTGGAAGAGAAGATCCTGTACTAGACAAGATCGACCAGGAATTATTGGGCCGCCAACCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAACACGACAACAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCTCCGCCCAGGGCCTGGTGCAGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGACAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAATTCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTT--ACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC-GGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT-GGGCAAACTGGCACATTTTGATTACA-TACATGTATTCTTTGATTTCTTCTCCCTTTTCCCATTGCTGAGCATAGCGAATTACTTGCTCCCTTTTCTTGCCCCTAGGGTGGGTATGCATACTATATATATTTTGTTTTACTTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB643073             [TACAACTACTTTCTTTTTCATGATTTGTCTTACTCGTGGAGATCATTGGTCTTGGCCTGTTTGGATTAGGCTTGAGTAAATTCAGTAAACATGTTTGTTAGAATTAACATGTATAGATGTTAATCTTACTTCTCTTGTGTGCTTTGCAGATCTGTTGTATGTTCTATCTGACTTGCCAAGGCAACTTAACTTTATTGAGCATACCAGTGACATCGGATGGAAGGAGTATCAGAGGGCAAAGCCGGTGATAATTGACCCTGGGCTATACAGCCTGCAGAAATCTGATGTTTTCTGGATTACAGAGAAAAGAAGTGTTCCAACCGCATTCAAGCTCTTCACTGGCTCGGCGTGGATGATGCTTACTCATCAATTTATTGAATACTGCATATGGGGTTGGGACAATCTTCCCAGGACGGTCCTGATGTATTATGCCAATTTTCTTTCTTCACCAGAGGGTTACTTCCACACAGTCATTTGCAATGTCCCAGAGTTCCGCAACACCACTGTGAATCATGATCTACATTTCATTTCTTGGGACAACCCACCAAAGCAACACCCTCACTACCTCACCCTCAATGACTTTGACGGTATGGTTAACAGCAATGCTCCCTTTGCAAGAAAGTTTGGAAGAGAAGATCCTGTACTAGACAAGATCGACCAGGAATTATTGGGCCGCCAACCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAACACGACAACAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK070134             [                                                                                                                                                                                                                                   ATCAGAGGGCAAAGCCGGTGATAATTGACCCTGGGCTATACAGCCTGCAGAAATCTGATGTTTTCTGGATTACAGAGAAAAGAAGTGTTCCAACCGCATTCAAGCTCTTCACTGGCTCGGCGTGGATGATGCTTACTCATCAATTTATTGAATACTGCATATGGGGTTGGGACAATCTTCCCAGGACGGTCCTGATGTATTATGCCAATTTTCTTTCTTCACCAGAGGGTTACTTCCACACAGTCATTTGCAATGTCCCAGAGTTCCGCAACACCACTGTGAATCATGATCTACATTTCATTTCTTGGGACAACCCACCAAAGCAACACCCTCACTACCTCACCCTCAATGACTTTGACGGTATGGTTAACAGCAATGCTCCCTTTGCAAGAAAGTTTGGAAGAGAAGATCCTGTACTAGACAAGATCGACCAGGAATTATTGGGCCGCCAACCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAACACGACAACAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCTCCGCCCAGGGCCTGGTGCAGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGACAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAATTCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTT  ACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC GGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT GGGCAAACTGGCACATTTTGATTACA TACATGTATTC                                                                                                                                                                                       ]
[-] EMBL CB643074             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGCAATGCTCCCTTTGCAAGAAAGTTTGGAAGAGAAGATCCTGTACTAGACAAGATCGACCAGGAATTATTGGGCCGCCAACCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAACACGACAACAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCTCCGCCCAGGGCCTGGTGCAGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGACAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAATTCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTT  ACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC GGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT GGGCAAACTGGCACATTTTGATTACA TACATGTATTCTTTGATTTCTTCTCCCTTTTCCCATTGCTGAGCATAGCGAATTACTTGCTCCCTTTTCTTGCCCCTAGGGTGGGTATGCATACTATATATATTTTGTTTTACTTAAAAGA                                                                         ]
[-] EMBL CB673094             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGGGCCGCCACCCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAACACGACACCAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCTCCGCCCAGGGCCTGGTGCAGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGACAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAATTCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTT  ACACAAACCACTTGAGTTGAATCCCCGTACAGGAGACCAC GCCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT GGGCAACCTGGCACATTTTCCTTAAA GGGATGTATTCT                                                                                                                                                                                      ]
[-] EMBL CB636028             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGACAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAATTCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTT  ACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC GGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTTTTTTGGGGCAAACTGGCACATTTTGATTACA AACATGTATTTTT                                                                                                                                                                                     ]
[+] EMBL AA751088             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACTATCAAAATTCGAGGATGTTNCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATCAATTCCACATGGATGGAATGGTCAGATAGGTGA CTTTTT  ACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC GGCCGTAGCACAC GAGATTATACAGCACTAATAGCTCA TAG  TATG                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BI807595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCATC ATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTTACACACAAACCACTTGAGTTGAATCACCGTACAGGAGACCAC GGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT GGGC AACTGGCACATTTTGATTACACTACATGTATTCTTTGATTTaaaaa                                                                                                                                                                          ]
[-] EMBL OSR27791A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAACCACTTGAGTTGAATCACCGTACAGGAGACCACGGGCCGTAGCACACGGAGATTATACAGCACTAATAGCTCATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTCTCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACCAGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCT GGGCAAACTGGCACATTTTGATTACA TACATGTATTCTTTGATTTC                                                                                                                                                                              ]
[+] EMBL BQ907581             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgCTTGGATTCTTCT GGGCCAACTGGCACATTTTGATTACA TACATGTATTCTTTGATTTCTTCTCCCTTTTCCCAaaaaaaaaa                                                                                                                                                      ]
[+] EMBL CF331118             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         TTTTCTTGCCCCTCTGGTGGGTATGCATACTATATATATTTTGTTTTATGTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_12538#0
TACAACTACTTTCTTTTTCATGATTTGTCTTACTCGTGGAGATCATTGGTCTTGGCCTGT
TTGGATTAGGCTTGAGTAAATTCAGTAAACATGTTTGTTAGAATTAACATGTATAGATGT
TAATCTTACTTCTCTTGTGTGCTTTGCAGATCTGTTGTATGTTCTATCTGACTTGCCAAG
GCAACTTAACTTTATTGAGCATACCAGTGACATCGGATGGAAGGAGTATCAGAGGGCAAA
GCCGGTGATAATTGACCCTGGGCTATACAGCCTGCAGAAATCTGATGTTTTCTGGATTAC
AGAGAAAAGAAGTGTTCCAACCGCATTCAAGCTCTTCACTGGCTCGGCGTGGATGATGCT
TACTCATCAATTTATTGAATACTGCATATGGGGTTGGGACAATCTTCCCAGGACGGTCCT
GATGTATTATGCCAATTTTCTTTCTTCACCAGAGGGTTACTTCCACACAGTCATTTGCAA
TGTCCCAGAGTTCCGCAACACCACTGTGAATCATGATCTACATTTCATTTCTTGGGACAA
CCCACCAAAGCAACACCCTCACTACCTCACCCTCAATGACTTTGACGGTATGGTTAACAG
CAATGCTCCCTTTGCAAGAAAGTTTGGAAGAGAAGATCCTGTACTAGACAAGATCGACCA
GGAATTATTGGGCCGCCAACCTGACGGGTTCGTGGCAGGTGGGTGGATGGATCTGTTGAA
CACGACAACAGTGAAAGGATCGTTCACTGTTGAGCGTGTACAAGATCTCCGCCCAGGGCC
TGGTGCAGACAGGCTAAAGAAACTTGTCACAGGCTTGCTCACCCAGGAAGGCTTTGATGA
CAAGCATTGCTTGTGAAACTTGCAGTAATATGATTCTGGGGTAGGTTACACTATCAAAAT
TCGAGGATGTTGCGCCATTAGCTAGTCATCTACTAGCTGAAGAAGCAGCAGCACATAGCA
TCAATTCCACATGGATGGAATGGTCAGATAGGTGATCTTTTTACACAAACCACTTGAGTT
GAATCACCGTACAGGAGACCACGGCCGTAGCACACGGAGATTATACAGCACTAATAGCTC
ATTAGGTTATGTTAGAGGATTATATCAGCCCCCAACCATTAATAATCTCTTCTTGATCTC
TCTGCGCTGCGGGTTGTCCAAGATGGTCCATTATTCGTTCAGAAAATCACAGCACTGACC
AGATCAATTTGCCAACCTGCAGCGCTTGAGATTTCGTTGTATTAACTTGGATTCTTCTGG
GCAAACTGGCACATTTTGATTACATACATGTATTCTTTGATTTCTTCTCCCTTTTCCCAT
TGCTGAGCATAGCGAATTACTTGCTCCCTTTTCTTGCCCCTAGGGTGGGTATGCATACTA
TATATATTTTGTTTTACTTAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case