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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12574#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2859 fasta sequence
[TGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAGCCAGGGGTATGTATGTTTGCCGCACACTGAGTTATAAGGGGGTTGATTTTGATATTGTGGAGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTGAGTTCCGCCTTGAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAATATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAAAAGTACCTGCTGTTGTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTGGTTGGTCTTCAGAGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACAAAATATGGTGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGAAAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGAAATTCACCGTAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAGTAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATCTGAGTCAGATCATGGATCGACAGAGTCTGATGAGGAGTTTCACATGTGTCAAATCTGTAACACAGAGGAGGAGAAGACTCTGTTGCTTCATTGTTCTGGTTGTTCTCGACATGTTCACCCTGGTTGTCTGACACCACCTTGGACTGGGGTATTAACTGATGACTGGTCATGCTACACATGCAAGAAGTTAGAAGGAGAGGAAAATGAACAAGATGCTCATGTAGCTGATTTTTCACAGAGGTATGATGCTGCAGTAGAGAAAAAAAAGAAGATTTTGGATATGATACGTTCTTTGGATCTCCCTAACAATCCTCTTGATGACATCATTGATCAGCTAGGAGGCCCTGACAATGTTGCAGAAATAACTGGACGGCGTGGTATGCTAATAAGAGCTTCTGACGGAAAAGGCGTTGTTTATCAGGCGCGGAATGCGAAAGAAGTGTCGATGGAGATGATCAATATGCATGAAAAACAGCAGTTCATGGATGGCAAAAAACTAATATCTATTATATCTGAAGCAGGATCAGCTGGCGTTTCGCTGCATGCTGATAGAAGGGCAAAAAACCAGAGAAGAAGAGTACACATAACACTTGAGCTCCCTTGGAGTGCAGATCGTGCAATACAACAGTTTGGGAGAACTCATCGTTCTAATCAAACTTCTGCACCACAATATAGGCTTCTCTTTACAAATCTTGGTGGTGAAAAGCGATTTGCATCAATCGTAGCAAAAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTCTGAGTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCATCATGTATAGAGGAATAATGGAGCAGGATTCTTTTCCAGTTGTTCCTCCGGGGTGTTCTGACAATCAATCTAGCATCCAAGAGTTCATTGCTGAAGCAAAAGCTGCTCTAGTATCAGTTGGGATTATCAGGGATGCTGTAGTGTGCAATGGAAAAGTTGCTGGGAAGCTTTCTGGTCGGATTGTTGACTCAGATATGCATGATGTTGCTCGTTTTCTTAACCGCCTTTTGGGACTGGCTCCGAAAATCCAGAATAGGTTATTTGATCTTTTTACAAGTATACTTGATGTTGTTTTGCACAATGCACGAATAGAAGGGCAGCTGGATTCTGGAATCGTTGATATAAAAGCTAAAAATGTTGAAATGAAAGAATCACCCAAGACCGTTCACATTGATAGCTTGTCAGGCGCGCCAACTGTACTTTTTACTTTCACCATTGACCGAGGAGTTACTTGGGAGACGGCAAAATCAATGCTTGATGAGAGGCAAAAGGATGGTGCTGGTTCTTCTAATGATGGGTTTTACGAGTCCAAAAGGGAATGGATGGGAGGAAGGCATTTCATACTTGCTTTTGAAGGCTCAATCGAAGGGATGTATAAAATAATTCGACCTGCTATTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACAGGAAAGTGTCATCAATAGAAAAGGTTAACAAAGGTTGGCAAGATGAATATGATGCTTCGTCCAAGCAGTGTATGCATGGATCGAAATGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAGAGGTTAACATCTT-GGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGAC-AACAACTGACAATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAGGCTTACAGTGGGTCCAAGATATT-GAT-GACT-GACATGGATAGGCTTGATTTGTTTTGT-TCACATTCATATTGGTGGTGTCGATCGCTTT-CT-GATGTTAGAT-GCAGCAGCT-CAGAGGTGCGGCACATTTGATTTT-GTTT-T-TTTATTGA-GCCAGCAAGCTAATATGACTAATGT-GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCATACTGTTTCGGAGGAATAGGCCACGGTTGCTTATT-CCCTGCATATCATCAGAATGAAA-GGTTGTCTATAC]
[+] EMBL AK101763 [TGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAGCCAGGGGTATGTATGTTTGCCGCACACTGAGTTATAAGGGGGTTGATTTTGATATTGTGGAGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTGAGTTCCGCCTTGAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAATATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAAAAGTACCTGCTGTTGTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTGGTTGGTCTTCAGAGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACAAAATATGGTGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGAAAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGAAATTCACCGTAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAGTAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATCTGAGTCAGATCATGGATCGACAGAGTCTGATGAGGAGTTTCACATGTGTCAAATCTGTAACACAGAGGAGGAGAAGACTCTGTTGCTTCATTGTTCTGGTTGTTCTCGACATGTTCACCCTGGTTGTCTGACACCACCTTGGACTGGGGTATTAACTGATGACTGGTCATGCTACACATGCAAGAAGTTAGAAGGAGAGGAAAATGAACAAGATGCTCATGTAGCTGATTTTTCACAGAGGTATGATGCTGCAGTAGAGAAAAAAAAGAAGATTTTGGATATGATACGTTCTTTGGATCTCCCTAACAATCCTCTTGATGACATCATTGATCAGCTAGGAGGCCCTGACAATGTTGCAGAAATAACTGGACGGCGTGGTATGCTAATAAGAGCTTCTGACGGAAAAGGCGTTGTTTATCAGGCGCGGAATGCGAAAGAAGTGTCGATGGAGATGATCAATATGCATGAAAAACAGCAGTTCATGGATGGCAAAAAACTAATATCTATTATATCTGAAGCAGGATCAGCTGGCGTTTCGCTGCATGCTGATAGAAGGGCAAAAAACCAGAGAAGAAGAGTACACATAACACTTGAGCTCCCTTGGAGTGCAGATCGTGCAATACAACAGTTTGGGAGAACTCATCGTTCTAATCAAACTTCTGCACCACAATATAGGCTTCTCTTTACAAATCTTGGTGGTGAAAAGCGATTTGCATCAATCGTAGCAAAAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTCTGAGTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCATCATGTATAGAGGAATAATGGAGCAGGATTCTTTTCCAGTTGTTCCTCCGGGGTGTTCTGACAATCAATCTAGCATCCAAGAGTTCATTGCTGAAGCAAAAGCTGCTCTAGTATCAGTTGGGATTATCAGGGATGCTGTAGTGTGCAATGGAAAAGTTGCTGGGAAGCTTTCTGGTCGGATTGTTGACTCAGATATGCATGATGTTGCTCGTTTTCTTAACCGCCTTTTGGGACTGGCTCCGAAAATCCAGAATAGGTTATTTGATCTTTTTACAAGTATACTTGATGTTGTTTTGCACAATGCACGAATAGAAGGGCAGCTGGATTCTGGAATCGTTGATATAAAAGCTAAAAATGTTGAAATGAAAGAATCACCCAAGACCGTTCACATTGATAGCTTGTCAGGCGCGCCAACTGTACTTTTTACTTTCACCATTGACCGAGGAGTTACTTGGGAGACGGCAAAATCAATGCTTGATGAGAGGCAAAAGGATGGTGCTGGTTCTTCTAATGATGGGTTTTACGAGTCCAAAAGGGAATGGATGGGAGGAAGGCATTTCATACTTGCTTTTGAAGGCTCAATCGAAGGGATGTATAAAATAATTCGACCTGCTATTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACAGGAAAGTGTCATCAATAGAAAAGGTTAACAAAGGTTGGCAAGATGAATATGATGCTTCGTCCAAGCAGTGTATGCATGGATCGAAATGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAGAGGTTAACATCTT GGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGAC AACAACTGACAATCAGCGAATCGTTGGGCTACTCATTCCGAATTCAGATGTGGAGTCAGT TTAACAGGCTTACAGTGGGTCCAAGATATT GAT GACT GACATGGATAGGCTTGATTTGTTTTGT TCACATTCATATTGGTGGTGTCGATCGCTTT CT GATGTTAGAT GCAGCAGCT CAGAGGTGCGGCACATTTGATTTT GTTT T TTTATTGA GCCAGCAAGCTAATATGACTAATGT GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCATACTGTTTCGGAGGAATAGGCCACGGTTGCTTATT CCCTGCATATCATCAGAATGAAA GGTTGTCTAT ]
[+] EMBL CB644779 [ GCTCTACTATCAGTTGGGATTATCAGGGATGCTGTAGTGTGCAATGGAAAAGTTGCTGGGAAGCTTTCTGGTCGGATTGTTGACTCAGATATGCATGATGTTGCTCGTTTTCTTAACCGCCTTTTGGGACTGGCTCCGAAAATCCAGAATAGGTTATTTGATCTTTTTACAAGTATACTTGATGTTGTTTTGCACAATGCACGAATAGAAGGGCAGCTGGATTCTGGAATCGTTGATATAAAAGCTAAAAATGTTGAAATGAAAGAATCACCCAAGACCGTTCACATTGATAGCTTGTCAGGCGCGTCAACTGTACTTTTTACTTTCACCATTGACCGAGGAGTTACTTGGGAGACGGCAAAATCAATGCTTGATGAGAGGCAAAAGGATGGTGCTGGTTCTTCTAATGATGGGTTTTACGAGTCCAAAAGGGAATGGATGGGAGGAAGGCATTTCATACTTGCTTTTGAAGGCTCAATCGAAGGGATGTATAAAATAATTCGACCTGCTATTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACAGGAAAGTGTCATCAATAGAAAAGGTTAACAAAGGTTGGCAAGATGAATATGATGCTTCGTCCAAGCAGTGTATGCATGGATCGAAATGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAGAGGTTAACATCTT GGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAGCTAAGCAGGTTCGTCAAAGTCA ]
[+] EMBL AW069906 [ CTTTCACCATTGACCGAGGAGTTACTTGGGAGACGGCAAAATCAATGCTTGATGAGAGGCAAAAGGATGGTGCTGGTTCTTCTAATGATGGGTTTTACGAGTCCAAAAGGGAATGGATGGGAGGAAGGCATTTCATACTTGCTTTTGAAGGCTCAATCGAAGGGATGTATAAAATAATTCGACCTGCTATTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACctgcc ]
[-] EMBL CB644780 [ AAAATAATTCGACCTGCTATTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACAGGAAAGTGTCATCAATAGAAAAGGTTAACAAAGGTTGGCAAGATGAATATGATGCTTCGTCCAAGCAGTGTATGCATGGATCGAAATGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAGAGGTTAACATCTT GGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGAC AACAACTGACAATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAGGCTTACAGTGGGTCCAAGATATT GAT GACT GACATGGATAGGCTTGATTTGTTTTGT TCACATTCATATTGGTGGTGTCGATCGCTTT CT GATGTTAGAT GCAGCAGCT CAGAGGTGCGGCACATTTGATTTT GTTT T TTTATTGA GCCAGCAAGCTAATATGACTAATGT GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCATACTGTTTCGGAGGAATAGGCCACGGTTGCTTATT CCCTGCATATCATCAGAATGAAA GGTTGTCTATA ]
[+] EMBL CA764943 [ cgacaagggGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAGAGGTTAACATCTT GGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGAC AACAACTGACAATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAGGCTTACAGTGGGTCCAAGATATT GAT GACT GACATGGATAGGCTTGA TTGTTTTGT TCACATTCATATTGGTGGTGTCGATCGCTTT CT GATGTTAGAT GCAGCAGCT CAGAGGTGCGGCACATTTGATTTT GTTT T TTTATTGA GCCAGCAAGCTAATATGACTAATGT GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCATACTGTTTCGGAGGAATAGGCCACGNTTGCTTATTCCCCTGCATATCATCAGAATGAAAGGGNTGTCTATAC]
[+] EMBL BI806260 [ catTCTTGGGGTGGTCTCA ACTTCCA TTTGGGGTAC ATAGAAAA GCCCTAGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGACGAACAACTGACCATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAGGCTTACNGGGGGTCCAAGATATTGGATGGACTGGACATGGATAGGCTTGATTTGTTTTGTGTCACATTCATATTGGTGGTGTCGATCGCTTTGCTGGATGTTAGATGGCAGCAGCTGCAGAGGTGCGGCACATTTGATTTTGGTTTNTNTTTATTGACGCCAGCAAGCTAATATGACTAATGTGGACAGTGTC ACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTNCCTTGTTATGTTGTATATTGGGATGTAAAAC ACTAAACCCCAGCTTATATCAAAA ]
[+] EMBL AK058541 [ AGCTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGAC AACAACTGACAATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAGGCTTACAGTGGGTCCAAGATATT GAT GACT GACATGGATAGGCTTGATTTGTTTTGT TCACATTCATATTGGTGGTGTCGATCGCTTT CT GATGTTAGAT GCAGCAGCT CAGAGGTGCGGCACATTTGATTTT GTTT T TTTATTGA GCCAGCAAGCTAATATGACTAATGT GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCATACTGTTTCGGAGGAATAGGCCACGGTTGCT ]
[+] EMBL AU069208 [ ATT GAT GACT GACATGGATAGGCTTGATTTGTTTTGT TCACATTCATATTGGTGGTGTCGATCGCTTT CT GATGTTAGAT GCAGCAGCT CAGAGGTGCGGCACATTTGATTTT GTTT T TTTATTGA GCCAGCAAGCTAATATGACTAATGT GACAGTGTCAACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTACCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAAACCCCAGCT ]
consensusID : consensus_12574#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 694 fasta sequence
[AGAATCTCTCGAGAAAGGGTGGTGTGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAGCCAGGGGTATGTATGTTTGCCGCACACTAAGTTATAAGGGGGTTGATTTTGATATTGTGGAGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTGAGTTCCGCCTTAAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAATATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAAAAGTACCTGCTGTTGTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTGGTTGGTCTTCAGAGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACAAAATATGGTGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGAAAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGAAATTCACCGTAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAGTAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATGTAAGTTTGTTGGGAACTACTTGATTTTTGTTTCAGGTGCCAAAAAAAA]
[-] EMBL CA760222 [AGAATCTCTCGAGAAAGGGTGGTGTGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAGCCAGGGGTATGTATGTTTGCCGCACACTAAGTTATAAGGGGGTTGATTTTGATATTGTGGAGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTGAGTTCCGCCTTAAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAATATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAAAAGTACCTGCTGTTGTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTGGTTGGTCTTCAGAGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACAAAATATGGTGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGAAAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGAAATTCACCGTAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAGTAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATGTAAGTTTGTTGGGAACTACTTGATTTTTGTTTCAGGTGCCAAAAAAAA]
consensusID : consensus_12574#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 383 fasta sequence
[CTAATCAAACTTCTGCACCACAATATAGGCTTCTCTTTACAAATCTTGGTGGTGAAAAGCGATTTGCATCAATCGTAGCAAAAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTCTGAGTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCATCATGTATAGAGGAATAATGGAGCAGGTTTATATAATTACACTATAGTTTTTG-AATATGTTTTCCTTTTCATGCTTTATTCACCATTCTAAGAGTTACTTTCAAGATGACCAGGATTCTTTTCCAGTTGTTCCTCCGGGGGTGTTCTGACAATCAATCTAGCATCCAAGAGTTCATTGCTGAAGCAAAAGCTGCTCT]
[+] EMBL CF323607 [CTAATCAAACTTCTGCACCACAATATAGGCTTCTCTTTACAAATCTTGGTGGTGAAAAGCGATTTGCATCAATCGTAGCAAAAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTCTGAGTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCATCATGTATAGAGGAATAATGGAGCAGGTTTATATAATTACACTATAGTTTTTG AATATGTTTTCCTTTTCATGCTTTATTCACCATTCTAAGAGTTACTTTCAAGATGACCAGGATTCTTTTCCAGTTGTTCCTCCGGGGGTGTTCTGACAATCAATCTAGCATCCAAGAGTTCATTGCTGAAGCAAAAGCTGCTCT]
[+] EMBL CF323536 [ cTGCATCAATCGTAGCGAAAATACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTGTGAGTGCTTTCAACTACGACAGCAATTATGGGAAAAAATCCCTAACCATCATGTATAGAGGAAT ATGGAGCAGGTTTATATAATTACACTATAGTTTTTGAAATATG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12574#0 ------------------------TGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAG 36
consensus_12574#1 AGAATCTCTCGAGAAAGGGTGGTGTGGGCGCTCTTGAACTTGTTGCCATGGACATGAAAG 60
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CCAGGGGTATGTATGTTTGCCGCACACTGAGTTATAAGGGGGTTGATTTTGATATTGTGG 96
consensus_12574#1 CCAGGGGTATGTATGTTTGCCGCACACTAAGTTATAAGGGGGTTGATTTTGATATTGTGG 120
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTG 156
consensus_12574#1 AGGCTCCCCTTGAGGAAAGAATGATGAATATGTACAGAAAGGCAGCCGAATTTTGGGCTG 180
consensus_12574#2 -----------------------------------------CTAATCAAACTT----CTG 15
* * ** ** ***
consensus_12574#0 AGTTCCGCCTTGAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAA 216
consensus_12574#1 AGTTCCGCCTTAAGCTCCTATCAGCAGGTGAATCATTTACAGAAGGCATTTCAAATCAAA 240
consensus_12574#2 CACCACAATATAGGCTTCTCTTTACAAATC--TTGGTGGTGAAAAGCGATTTGCATCAAT 73
* * *** ** * ** * * * ** ** ** *****
consensus_12574#0 TATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAA 276
consensus_12574#1 TATGGCGGCTATATTGGGCTAGCCATCAGCGTTTCTTCAGGCATATGTGCATGTCTGCAA 300
consensus_12574#2 CGTAGCAAAAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGAT-CGCAGGGCTG--- 129
* ** * * *** * * * *** ** ** * * ** *** * ***
consensus_12574#0 AAGTACCTGCTGTT-GTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTG 335
consensus_12574#1 AAGTACCTGCTGTT-GTGAAGTTGGCTAAGGAGGCCCTGGCAGAGAATAAGTGTGTGGTG 359
consensus_12574#2 ---GACCTTCTCTGAGTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCA 186
**** ** * *** ** *** * ** * * ** ***
consensus_12574#0 GTTGGTCTTCAG-AGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACA---AAATATGG 391
consensus_12574#1 GTTGGTCTTCAG-AGCACTGGAGAGGCTCGAACAGAAGAAGCTATCACA---AAATATGG 415
consensus_12574#2 TCATGTATAGAGGAATAATGGAGCAGGTTTATATAATTACACTATAGTTTTTGAATATGT 246
** * ** * * ***** * * * * * **** ******
consensus_12574#0 TGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGA 451
consensus_12574#1 TGTTGAAATGGAAGACTTTGTTTCTGGTCCTCGGGAGCTGCTTCTAAAGCTGGTAGAAGA 475
consensus_12574#2 TTTCCTTTTC--ATGCTTTATTCACCATTCT-AAGAGTTACTTTCAAGAT-----GACCA 298
* * * * **** ** * ** *** * *** ** ** *
consensus_12574#0 AAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGA 511
consensus_12574#1 AAATTACCCTCTACCTCCGAAGCCTGATTCTTTTCAACAAGGTGAAGAAAAAGTCACAGA 535
consensus_12574#2 GGATTCTTTTCCAGTTGTTCCTCCGGGGGTGTTCTGACAA--TCAATCTAGCATC-CAAG 355
*** ** * * ** * ** **** * ** * ** **
consensus_12574#0 AATTCACCG-TAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAG 570
consensus_12574#1 AATTCACCG-TAAGCGGCATTCTGCCCCAGATGTATCATTTAAAGGACGTGTTAGAAAAG 594
consensus_12574#2 AGTTCATTGCTGAAGCAAAAGCTGCTCT-------------------------------- 383
* **** * * * * **** *
consensus_12574#0 TAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATCTGAGTCAG 630
consensus_12574#1 TAGCAAAACTGGTAGAAGTGAGTGATGATGACAGTGATGATTACTCTCCATGTAAGTTTG 654
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ATCATGGATCGACAGAGTCTGATGAGGAGTTTCACATGTGTCAAATCTGTAACACAGAGG 690
consensus_12574#1 -TTGGGAACTACTTGATTTTTGTTTCAGGTGCCAAAAAAAA------------------- 694
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AGGAGAAGACTCTGTTGCTTCATTGTTCTGGTTGTTCTCGACATGTTCACCCTGGTTGTC 750
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TGACACCACCTTGGACTGGGGTATTAACTGATGACTGGTCATGCTACACATGCAAGAAGT 810
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TAGAAGGAGAGGAAAATGAACAAGATGCTCATGTAGCTGATTTTTCACAGAGGTATGATG 870
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CTGCAGTAGAGAAAAAAAAGAAGATTTTGGATATGATACGTTCTTTGGATCTCCCTAACA 930
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ATCCTCTTGATGACATCATTGATCAGCTAGGAGGCCCTGACAATGTTGCAGAAATAACTG 990
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GACGGCGTGGTATGCTAATAAGAGCTTCTGACGGAAAAGGCGTTGTTTATCAGGCGCGGA 1050
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ATGCGAAAGAAGTGTCGATGGAGATGATCAATATGCATGAAAAACAGCAGTTCATGGATG 1110
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GCAAAAAACTAATATCTATTATATCTGAAGCAGGATCAGCTGGCGTTTCGCTGCATGCTG 1170
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ATAGAAGGGCAAAAAACCAGAGAAGAAGAGTACACATAACACTTGAGCTCCCTTGGAGTG 1230
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CAGATCGTGCAATACAACAGTTTGGGAGAACTCATCGTTCTAATCAAACTTCTGCACCAC 1290
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AATATAGGCTTCTCTTTACAAATCTTGGTGGTGAAAAGCGATTTGCATCAATCGTAGCAA 1350
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AAAGACTGGAGTCTCTAGGAGCTTTAACGCAAGGAGATCGCAGGGCTGGACCTTCTCTGA 1410
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GTGCTTTTAACTACGACAGCAATTATGGGAAAAAAGCCCTAACCATCATGTATAGAGGAA 1470
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TAATGGAGCAGGATTCTTTTCCAGTTGTTCCTCCGGGGTGTTCTGACAATCAATCTAGCA 1530
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TCCAAGAGTTCATTGCTGAAGCAAAAGCTGCTCTAGTATCAGTTGGGATTATCAGGGATG 1590
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CTGTAGTGTGCAATGGAAAAGTTGCTGGGAAGCTTTCTGGTCGGATTGTTGACTCAGATA 1650
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TGCATGATGTTGCTCGTTTTCTTAACCGCCTTTTGGGACTGGCTCCGAAAATCCAGAATA 1710
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GGTTATTTGATCTTTTTACAAGTATACTTGATGTTGTTTTGCACAATGCACGAATAGAAG 1770
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GGCAGCTGGATTCTGGAATCGTTGATATAAAAGCTAAAAATGTTGAAATGAAAGAATCAC 1830
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CCAAGACCGTTCACATTGATAGCTTGTCAGGCGCGCCAACTGTACTTTTTACTTTCACCA 1890
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TTGACCGAGGAGTTACTTGGGAGACGGCAAAATCAATGCTTGATGAGAGGCAAAAGGATG 1950
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GTGCTGGTTCTTCTAATGATGGGTTTTACGAGTCCAAAAGGGAATGGATGGGAGGAAGGC 2010
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ATTTCATACTTGCTTTTGAAGGCTCAATCGAAGGGATGTATAAAATAATTCGACCTGCTA 2070
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TTGGTGAAGCATTAAGAGAAATGCCTTTAACAGAACTGAAAAGCAAGTACAGGAAAGTGT 2130
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CATCAATAGAAAAGGTTAACAAAGGTTGGCAAGATGAATATGATGCTTCGTCCAAGCAGT 2190
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GTATGCATGGATCGAAATGCAAAGTGGGAAGCTACTGTACAGTGGGAAGAAGGTTGCAAG 2250
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AGGTTAACATCTTGGGTGGTCTCATACTTCCAGTTTGGGGTACAATAGAAAAGGCCCTAG 2310
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CTAAGCAGGTTCGTCAAAGTCACAAGCGAGTACGTGTTGTCCGTTTAGAGACAACAACTG 2370
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ACAATCAGCGAATCGTTGGACTACTCATTCCGAATTCAGCTGTGGAGTCAGTATTAACAG 2430
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 GCTTACAGTGGGTCCAAGATATTGATGACTGACATGGATAGGCTTGATTTGTTTTGTTCA 2490
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CATTCATATTGGTGGTGTCGATCGCTTTCTGATGTTAGATGCAGCAGCTCAGAGGTGCGG 2550
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CACATTTGATTTTGTTTTTTTATTGAGCCAGCAAGCTAATATGACTAATGTGACAGTGTC 2610
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 AACTTAGAAATTAGGCAGGTAAATACACCCTCAACTTCTGTATGTAAAAGATGTGGTGTA 2670
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 CCCTACCCCCCTCTTTTCTATTTCCTTGTTATGTTGTATATTGGGATGTAAAACAACTAA 2730
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ACCCCAGCTTATATCAGAAAAAAGAAAAATGCGAGGGCGCACCCACCAATATGGCGCCAT 2790
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 ACTGTTTCGGAGGAATAGGCCACGGTTGCTTATTCCCTGCATATCATCAGAATGAAAGGT 2850
consensus_12574#1 ------------------------------------------------------------
consensus_12574#2 ------------------------------------------------------------
consensus_12574#0 TGTCTATAC 2859
consensus_12574#1 ---------
consensus_12574#2 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||