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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_12639#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3351 fasta sequence
[TTGCCTTCCACTTGGAGAGTTGAGTTCAGTTGAGAGGGAGAGAGAAAGAGAGAGGAGGATGCCATGGAGGTTCGTGCCATGTGGTCGGGGGCAGCTGTTCTTGGTGGTTCTTGGTCTTCTTCTTCTTCTTCTTGGTGAGGTCCATCATGGCTCAGGGGCTAGAACAGCTTCCCTCCCTAGGCTCGTCCCAGCTGAAGTGCGTACTCTTCGTCGTATCGCGCAGAAGATGGGGATCTTGCGTTGGAACTTCTCCGTTGATCCATGCAACTCCGGCGGTAACGGTGGCTTTGGGGGCACTGTGAATTGTGACTGCTCCTTCTACAACCATACATTCTGCCATGTCACTAACATAACACTGGAAGGGCAAAACTTCACTGGTGAGCTCCCACCGGACTTCGCCGAATTCCCCAATCTCCTCCAACTAGATCTAAGCAGAAGCTTATTGCATGGTGGAGTGCCTGACCAGTGGGCCCGAATGAAGCTACAGGGACTGTCATTAATGGGAAACAATTTGTCAGGGCCTTTTCCCATTGCTCTTACAAAGATCACAACCCTGACTAACCTGAGTATAGAAGGAAACAATTTTTATGGCCCAATCCCGTCCGACATTGGACATCTCATGCAAATGGAGAAGTTAATATTATCGGCCAATGAGTTCTCCGGACCCCTTCCTGCTGCTCTTGCTAGGTTAACAAATTTAACCGACCTAAGGATTTCTGGTAACAATTTTTCTGGAAGAGTGCCTGTTTTCTTGGGGAAGTTGAAAAAGCTCGGAAAATTGCAAATTGAAGGATCTTTATTGGAAGGGCCTATTCCCTCAGAATTTTCCAAATTGATAAACCTTTATGATCTGAGGATTAGTGATCTGAGAGGTAGAGGATCAGTTTTCCCGGACTTAAGGGAATTGGTGTCCATGAAAACAATCATACTACGGAATTGCTCCATCAATGGAAGCATACCATCTTACATTGGGAACATGGATAATCTTAAGCATCTGGATCTGTCTTTTAATAAACTGACTGGAGAAATACCAGCTTCATTTGCTAACATGGGACATGTAGATCACATATACCTAACAGGAAATTCACTCACTGGGAGTATACCTGATTGGATATTGAAGAGAAACAAGATTGCGGACATATCTTTTAACAACTTCACGATGGGGAGTTCAGGTCCTACCCAATGCGTTCCAGGGAGTGTCAATATGGTGGAGAGCTATTCACCTGAAATGAGCAGTTTGACTAATGTTGAGTCATGCTTAAAGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATAAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGGAAGAATGGTTCTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGTTATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTCTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTGATATCTGCAATATCAGTAGTACCAAACTTTGAAGTTCCTTTGGCTGTTGAACCACCGCAAATTGGAGGTAGCAAAAAGCTTTCAAGGATATCTAAAGCATTCCTGGTTGCCATGCCAATTTTAGCAATGTGCGCAGCACTTTTTGTCGGCATTTATTGGATTAAATGGAGGAGAAAGAACTCAATGCATAAAGATCTCAGAGCCTTTGACCTCCAAACTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCGGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTTTACAAGGTCAGCCATCATCACTGACTCCATGCTTAAACTCGGCAGTCTGATAAGGCAATGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCCTGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTTGAGGGGCACATACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTGAGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATGACTGCAGCACAAGCATCATCCAGCAACACCAATGAGTCATCATCTTTAGATATTGCTGGTAGCCTGAGACCTTAGGTGAGTTTAAATGTCAGAACTCAGAAGTGTTTCATGAGCTCTGTACATGTAAGAACCATTAGGAGTAGGTCATTTTGTCTCTTTTAGAAGTACAGTGTAAATACCAGACTAGTGTCAGATCCTACTATTAAGATGGACACTCTGCTTAAATCTTTAGGATAGTGAATTTTATATATGGCC]
[+] EMBL AK066121 [TTGCCTTCCACTTGGAGAGTTGAGTTCAGTTGAGAGGGAGAGAGAAAGAGAGAGGAGGATGCCATGGAGGTTGGTGCCATGTGGTCGGGGGCAGCTGTTCTTGGTGGTTCTTGGTCTTCTTCTTCTTCTTCTTGGTGAGGTCCATCATGGCTCAGGGGCTAGAACAGCTTCCCTCCCTAGGCTCCTCCCAGCTGAAGTGCGTACTCTTCGTCGTATCGCGCAGAAGATGGGGATCTTGCGTTGGAACTTCTCCGTTGATCCATGCAACTCCGGCGGTAACGGTGGCTTTGGGGGCACTGTGAATTGTGACTGCTCCTTCTACAACCATACATTCTGCCATGTTACTAACATAACACTGGAAGGGCAAAACTTCACTGGTGAGCTCCCACCGGACTTCGCCGAATTCCCCAATCTCCTCCAACTAGATCTAAGCAGAAGCTTATTGCATGGTGGAGTGCCTGACCAGTGGGCCCGAATGAAGCTACAGGGACTGTCATTAATGGGAAACAATTTGTCAGGGCCTTTTCCCATTGCTCTTACAAAGATCACAACCCTGACTAACCTGAGTATAGAAGGAAACAATTTTTATGGCCCAATCCCGTCCGACATTGGACATCTCATGCAAATGGAGAAGTTAATATTATCGGCCAATGAGTTCTCCGGACCCCTTCCTGCTGCTCTTGCTAGGTTAACAAATTTAACCGACCTAAGGATTTCTGGTAACAATTTTTCTGGAAGAGTGCCTGTTTTCTTGGGGAAGTTGAAAAAGCTCGGAAAATTGCAAATTGAAGGATCTTTATTGGAAGGGCCTATTCCCTCAGAATTTTCCAAATTGATAAACCTTTATGATCTGAGGATTAGTGATCTGAGAGGTAGAGGATCAGTTTTCCCGGACTTAAGGGAATTGGTGTCCATGAAAACAATCATACTACGGAATTGCTCCATCAATGGAAGCATACCATCTTACATTGGGAACATGGATAATCTTAAGCATCTGGATCTGTCTTTTAATAAACTGACTGGAGAAATACCAGCTTCATTTGCTAACATGGGACATGTAGATCACATATACCTAACAGGAAATTCACTCACTGGGAGTATACCTGATTGGATATTGAAGAGAAACAAGATTGCGGACATATCTTTTAACAACTTCACGATGGGGAGTTCAGGTCCTACCCAATGCGTTCCAGGGAGTGTCAATATGGTGGAGAGCTATTCACCTGAAATGAGCAGTTTGACTAATGTTGAGTCATGCTTAAAGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATAAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGGAAGAATGGTTCTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGTTATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTCTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTGATATCTGCAATATCAGTAGTACCAAACTTTGAAGTTCCTTTGGCTGTTGAACCACCGCAAATTGGAGGTAGCAAAAAGCTTTCAAGGATATCTAAAGCATTCCTGGTTGCCATGCCAATTTTAGCAATGTGCGCAGCACTTTTTGTCGGCATTTATTGGATTAAATGGAGGAGAAAGAACTCAATGCATAAAGATCTCAGAGCCTTTGACCTCCAAACTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCGGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTTTACAAGGTCAGCCATCATCACTGACTCCATGCTTAAACTCGGCAGTCTGATAAGGCAATGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCCTGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTTGAGGGGCACATACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTGAGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATGACTGCAGCACAAGCATCATCCAGCAACACCAATGAGTCATCATCTTTAGATATTGCTGGTAGCCTGAGACCTTAGGTGAGTTTAAATGTCAGAACTCAGAAGTGTTTCATGAGCTCTGTACATGTAAGAACCATTAGGAGTAGGTCATTTTGTCTCTTTTAGAAGTACAGTGTAAATACCAGACTAGTGTCAGATCCTACTATTAAGATGGACACTCTGCTTAAATCTTTAGGATAGTGAATTTTATATATGGCC]
[+] EMBL CB630095 [ AGGTTCGTGCCATGTGGTCGGGGGCAGCTGTTCTTGGTGGTTCTTGGTCTTCTTCTTCTTCTTCTTGGTGAGGTCCATCATGGCTCAGGGGCTAGAACAGCTTCCCTCCCTAGGCTCGTCCCAGCTGAAGTGCGTACTCTTCGTCGTATCGCGCAGAAGATGGGGATCTTGCGTTGGAACTTCTCCGTTGATCCATGCAACTCCGGCGGTAACGGTGGCTTTGGGGGCACTGTGAATTGTGACTGCTCCTTCTACAACCATACATTCTGCCATGTCACTAACATAACACTGGAAGGGCAAAACTTCACTGGTGAGCTCCCACCGGACTTCGCCGAATTCCCCAATCTCCTCCAACTAGATCTAAGCAGAAGCTTATTGCATGGTGGAGTGCCTGACCAGTGGGCCCGAATGAAGCTACAGGGACTGTCATTAATGGGAAACAATTTGTCAGGGCCTTTTCCCATTGCTCTTACAAAGATCACAACCCTGACTAACCTGAGTATAGAAGGAAACAATTTTTATGGCCCAATCCCGTCCGACATTGGACATCTCATGCAAATGGAGAAGTTAATATTATCGGCCAATGAGTTCTCCGGACCCCTTCCTGCTGCTCTTGCTAGGTTAACAAATTTAACCGACCTAAGGATTTCTGGTAACAATTTTTCTGGAAGAGTGCCTGTTTTCTTGGGGAAGTTGAAAAAGCTCGGAAAATTGCAAATTGAAGGATCTTTATTGGAAGGGCCTATTCCCTCAGAATTTTCCA ]
[+] EMBL CB633726 [ AGGTCCTTGCCATGTGGTCGGGGGCAGCTGTTCTTGGTGGTTCTTGGTCTTCTTCTTCTTCTTCTTGGTGAGGTCCATCATGGCTCAGGGGCTAGAACAGCTTCCCTCCCTAGGCTCGTCCCAGCTGAAGTGCGTACTCTTCGTCGTATCGCGCAGAAGATGGGGATCTTGCGTTGGAACTTCTCCGTTGATCCATGCAACTCCGGCGGTAACGGTGGCTTTGGGGGCACTGTGAATTGTGACTGCTCCTTCTACAACCATACATTCTGCCATGTCACTAACATAACACTGGAAGGGCAAAACTTCACTGGTGAGCTCCCACCGGACTTCGCCGAATTCCCCAATCTCCTCCAACTAGATCTAAGCAGAAGCTTATTGCATGGTGGAGTGCCTGACCAGTGGGCCCGAATGAAGCTACAGGGACTGTCATTAATGGGAAACAATTTGTCAGGGCCTTTTCCCATTGCTCTTACAAAGATCACAACCCTGACTAACCTGAGTATAGAAGGAAACAATTTTTATGGCCCAATCCCGTCCGACATTGGACATCTCATGCAAATGGAGAAGTTAATATTATCGGCCAATGAGTTCTCCGGACCCCTTCCTGCTGCTCTTGCTAGGTTAACAAATTTAACCGACCTAAGGATTTCTGGTAACAATTTTTCTGGAAGAGTGCCTGTTTTCTTGGGGAAGTTGAAAAAGCTCG ]
consensusID : consensus_12639#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1244 fasta sequence
[TGACTCCCTTTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAACGTGGTTTTGGTTCAGTTTACAAGGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCCTGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTTGAGGGGCACACACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTGAGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATGACAGCAGCACAAGCATCATCTAGCAACACC-AATGAGTCATCATC-TTTAGATGTTGATGGTAGCCTGAGACCTTAGGTGAGT-TTAAATGTCAGAAGTGTTTC-ATGAGCTCTGTACATGTA-AGAACCATTAGGATTAGGTCATTTTGT-CTGTCTTAGAAGTACAGTGTAAATACCAGA-CTAGTGTCAGATCCTACTATTAAGATGGACACACTCTGCATGAGAGCAGATGAAATCTTTAGGATGGTGAATTTGC]
[+] EMBL CB623214 [TGACTCCCTTTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAACGTGGTTTTGGTTCAGTTTACAAGGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCT ]
[-] EMBL CB623213 [ TGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCCTGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTTGAGGGGCACACACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTGAGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATGACAGCAGCACAAGCATCATCTAGCAACACC AATGAGTCATCATC TTTAGATGTTGATGGTAGCCTGAGACCTTAGGTGAGT TTAAATGTCAGAAGTGTTTC ATGAGCTCTGTACATGTA AGAACCATTAGGATTAGGTCATTTTGT CTGTCTTAGAAGTACAGTGTAAATACCAGA CTAGTGTCAGATCCTACTATTAAGATGGACACACTCTGCATGAGAGCAGATGAAATCTTTAGGATGGTGAATTTGC]
[-] EMBL CB623215 [ AGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCCTGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTTGAGGGGCACACACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTGAGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATGACAGCAGCACAAGCATCATCTAGCAACACC AATGAGTCATCATC TTTAGATGTTGATGGTAGCCTGAGACCTTAGGTGAGT TTAAATGTCAGAAGTGTTTC ATGAGCTCTGTACATGTA AGAACCATTAGGATTAGGTCATTTTGT CTGTCTTAGAAGTACAGTGTAAATACCAGA CTAGTGTCAGATCCTACTATTAAGATGGACACACTCTGCTTCAGAGCAGATGAAATCTTTAGGATGGT ]
[+] EMBL BI809992 [ ACCAAATGAGTCATCATCGTTTAGATGTTGATGGTAGCCTGAGACCTTAGGTGAGTGTTAAATGTCAGAAGTGTTTCTATGAGCTCTGTACATGTATAGAACCATTAGGATTAGGTCATTTTGTGCTGTCTTAGAAGTACAGTGTAAATACCAGAGCTAGTGTCA ]
consensusID : consensus_12639#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 930 fasta sequence
[GGAGAGCTATTCACCTGAAATGAGCAGTTTGTAAGATTATTTTGTTCACTGCTTCAAGAGATTATAAAGTTTCAGACGAATGCACAAATCAAGAGATAATAAATCATATTTGACTCTGGGTACCTCTATCTTCTGTGCAGGACTAATGTTGAGTCATGCTTAAAGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATCAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGGAAGAATGGTTTTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGTTATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTTTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTGATATCTGCAATATCAGTAGTACCAAGTATGGCATTTTGACATTTGAATCTATTGAATTTGAATGACATGTTTCATTAATCACTATGAGCAATGGTACAGCGTTGAACAACACATTCAGTGCCCTTCAAAACTTTGACTGATTGTATAATGATTTTCAGGGAAAAATGTTATATTCTTTTC]
[+] EMBL CF304277 [GGAGAGCTATTCACCTGAAATGAGCAGTTTGTAAGATTATTTTGTTCACTGCTTCAAGAGATTATAAAGTTTCAGACGAATGCACAAATCAAGAGATAATAAATCATATTTGACTCTGGGTACCTCTATCTTCTGTGCAGGACTAATGTTGAGTCATGCTTAAAGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATAAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAAT ]
[-] EMBL CB630096 [ AGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATCAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGGAAGAATGGTTTTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGTTATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTTTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTGATATCTGCAATATCAGTAGTACCAAGTATGGCATTTTGACATTTGAATCTATTGAATTTGAATGACATGTTTCATTAATCACTATGAGCAATGGTACAGCGTTGAACAACACATTCAGTGCCCTTCAAAACTTTGACTGATTGTATAATGATTTTCAGGGAAAAATGTTATAT ]
[-] EMBL CB633727 [ TTGAACATCAATTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAAAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAACTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGACGGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTACGGGCTTTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGGAAGAATGGTTTTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGTTATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTTTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTTTGATATCTGCAATATCAGTAGTACCAAGTATGGCATTTTGACATTTGAATTTATTGAATTTGAATGACATGTTTCATTAATCACTATGGGCAATGGTACAGCGTTGAACAACACATTCAGTGCCCTTCAAAACTTTGACTGATTGTATAATGATTTTAAAGAAAAAATGTTATATTCTTTTC]
consensusID : consensus_12639#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 804 fasta sequence
[TGACCTCCACAACTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTTTACAAGGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAAGAGCGCTCCTCATGCTGA]
[+] EMBL CB623212 [TGACCTCCACAACTGGATCCTTTACCTTGAGACAAATCAAAGTGGCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTTTACAAGGGTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTATCATCAAGGTCTAAACAAGGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTTGTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATGGAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTGGATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACATGAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTAGCAATATACTGCTTGACAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCACACACACATAAGTACAAGAATAGCTGGGACTATCGGATACATGGCTCCTGAGTATGCAATGCGTGGTTATTTGACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGGAAATTGTTAGTGGAAAAAGTAACACAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTTCTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCTCCTGGAGCTGGTAGATCCAGAGTTAGGCTCCGATTACTCAACGGAAAGAGCGCTCCTCATGCTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TTGCCTTCCACTTGGAGAGTTGAGTTCAGTTGAGAGGGAGAGAGAAAGAGAGAGGAGGAT 60
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GCCATGGAGGTTCGTGCCATGTGGTCGGGGGCAGCTGTTCTTGGTGGTTCTTGGTCTTCT 120
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TCTTCTTCTTCTTGGTGAGGTCCATCATGGCTCAGGGGCTAGAACAGCTTCCCTCCCTAG 180
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GCTCGTCCCAGCTGAAGTGCGTACTCTTCGTCGTATCGCGCAGAAGATGGGGATCTTGCG 240
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TTGGAACTTCTCCGTTGATCCATGCAACTCCGGCGGTAACGGTGGCTTTGGGGGCACTGT 300
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GAATTGTGACTGCTCCTTCTACAACCATACATTCTGCCATGTCACTAACATAACACTGGA 360
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGGGCAAAACTTCACTGGTGAGCTCCCACCGGACTTCGCCGAATTCCCCAATCTCCTCCA 420
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 ACTAGATCTAAGCAGAAGCTTATTGCATGGTGGAGTGCCTGACCAGTGGGCCCGAATGAA 480
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GCTACAGGGACTGTCATTAATGGGAAACAATTTGTCAGGGCCTTTTCCCATTGCTCTTAC 540
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AAAGATCACAACCCTGACTAACCTGAGTATAGAAGGAAACAATTTTTATGGCCCAATCCC 600
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GTCCGACATTGGACATCTCATGCAAATGGAGAAGTTAATATTATCGGCCAATGAGTTCTC 660
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CGGACCCCTTCCTGCTGCTCTTGCTAGGTTAACAAATTTAACCGACCTAAGGATTTCTGG 720
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TAACAATTTTTCTGGAAGAGTGCCTGTTTTCTTGGGGAAGTTGAAAAAGCTCGGAAAATT 780
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GCAAATTGAAGGATCTTTATTGGAAGGGCCTATTCCCTCAGAATTTTCCAAATTGATAAA 840
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CCTTTATGATCTGAGGATTAGTGATCTGAGAGGTAGAGGATCAGTTTTCCCGGACTTAAG 900
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GGAATTGGTGTCCATGAAAACAATCATACTACGGAATTGCTCCATCAATGGAAGCATACC 960
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 ATCTTACATTGGGAACATGGATAATCTTAAGCATCTGGATCTGTCTTTTAATAAACTGAC 1020
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TGGAGAAATACCAGCTTCATTTGCTAACATGGGACATGTAGATCACATATACCTAACAGG 1080
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AAATTCACTCACTGGGAGTATACCTGATTGGATATTGAAGAGAAACAAGATTGCGGACAT 1140
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 ATCTTTTAACAACTTCACGATGGGGAGTTCAGGTCCTACCCAATGCGTTCCAGGGAGTGT 1200
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CAATATGGTGGAGAGCTATTCACCTGAAATGAGCAGTTTGACTAATGTTGAGTCATGCTT 1260
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AAAGAGGAATTTTCCATGCGGTTCTTCTAATGGAAAATACAGGTATTCATTGAACATAAA 1320
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TTGTGGTGACAAAGAAGTAACTATTAACGGAACAAAATATGAAACTGATGTGGAACCAAA 1380
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAACTGGGCATTTAGCAGCACTGGGAA 1440
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CTTCATGGATAATAATATCAATGATGATAGCTACATTGCGACAAGCGCATCAAAATTGAC 1500
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GGTGCCCAACTCGGAGTTGTATGCAAAAGCACGCCTTTCACCTCTTTCACTGACATATTA 1560
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCTGAAATTGTTTT 1620
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTTTATACAGGG 1680
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AAGAATGGTTCTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGCGAAGGCAGT 1740
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 TATCAAGACTTTCACGGCAAACGTCACAAATCATACACTGGAAATTCATTTCTATTGGGC 1800
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTGATATCTGCAAT 1860
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 ATCAGTAGTACCAAACTTTGAAGTTCCTTTGGCTGTTGAACCACCGCAAATTGGAGGTAG 1920
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CAAAAAGCTTTCAAGGATATCTAAAGCATTCCTGGTTGCCATGCCAATTTTAGCAATGTG 1980
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ------------------------------------------------------------
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CGCAGCACTTTTTGTCGGCATTTATTGGATTAAATGGAGGAGAAAGAACTCAATGCATAA 2040
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ---------------TGACTCCCT---TTGGATCCTTTACCTTG--AGACAAATCAAAGT 40
consensus_12639#3 ---------------TGACCTCCACAACTGGATCCTTTACCTTG--AGACAAATCAAAGT 43
consensus_12639#0 AGATCTCAGAGCCTTTGACCTCCA-AACTGGATCCTTTACCTTG--AGACAAATCAAAGT 2097
consensus_12639#2 -------------GGAGAGCTATTCACCTGAAATGAGCAGTTTGTAAGATTATTTTGTTC 47
** ** * * *** *** * *
consensus_12639#1 G--GCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAACGTGGTTTTGGTTCAGTT 98
consensus_12639#3 G--GCAACAAGGAATTTTGATGCAGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTT 101
consensus_12639#0 G--GCAACAAGGAATTTTGATGCGGCCAACAAGATCGGCGAAGGTGGTTTTGGTTCAGTT 2155
consensus_12639#2 ACTGCTTCAAGAGATTATAAAGTTTCAGACGA-ATGCACAAATCAAGAGATAATAAATCA 106
** **** *** * * * * ** * ** * ** * * * *
consensus_12639#1 TACAAGG----------------------------------------------------- 105
consensus_12639#3 TACAAGG----------------------------------------------------- 108
consensus_12639#0 TACAAGGTCAGCCATCATCACTGACTCCATGCTTAAACTCGGCAGTCTGATAAGGCAATG 2215
consensus_12639#2 TATTTGACTCTGGGTACCTCTATCTTCTGTGCAGGACTAATGTTGAGTCATGCTTAAAGA 166
** *
consensus_12639#1 GTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTAT-CATCAAGGTCTAAACAA 164
consensus_12639#3 GTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTAT-CATCAAGGTCTAAACAA 167
consensus_12639#0 GTCTGTTGTCTGATGGCACCATTATTGCTGTCAAACAGCTAT-CATCAAGGTCTAAACAA 2274
consensus_12639#2 GGAATTTTCCATGCGGTTCTTCTAATGG-AAAATACAGGTATTCATTGAACATCAATTGT 225
* ** * ** * ** ** * **** *** *** * **
consensus_12639#1 GGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTT 224
consensus_12639#3 GGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTT 227
consensus_12639#0 GGGAATCGAGAATTTGTGAATGAGATAGGCATGATATCTGCACTCCAGCACCCAAACCTT 2334
consensus_12639#2 GGTGACAAAGAA---GTAACTATTAACGGAACAAAATATGAAACTGATG--TGGAACCAA 280
** * **** ** * * * ** * * ** ** * * ****
consensus_12639#1 GTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATG 284
consensus_12639#3 GTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATG 287
consensus_12639#0 GTCAAGCTTTATGGCTGTTGTACAGAAGGAAACCAGCTCTTGCTTGTTTATGAATACATG 2394
consensus_12639#2 AAGGAGCTTCATTGCTGTACCAAAGCCCAGGATCAAA--CTGGGCATTTAGCAGCAC-TG 337
***** ** ***** * ** * ** ** **** * ** **
consensus_12639#1 GAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTG 344
consensus_12639#3 GAAAACAACTGCCTAGCGCGTGCTCTTTTCGGTACAGTCGAACAATACAGGCTGAGCTTG 347
consensus_12639#0 GAAAACAACTGCCTAGCGCGTGCTCTTTTCG------TCGAACAATACAGGCTGAGCTTG 2448
consensus_12639#2 GGAACTTCATGGATAATA-ATATCAATGATGATA-GCTACATTGCGACAAGC-GCATCAA 394
* ** ** ** * * * * * *** ** *
consensus_12639#1 GATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACAT 404
consensus_12639#3 GATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACAT 407
consensus_12639#0 GATTGGCCGACGAGACGTAAGATTTGCCTGGGAATAGCAAGGGGTTTAGCATATCTACAT 2508
consensus_12639#2 AATTGACGGTGCCCAACTCGGAGTTGTATGCAAA-AGCACGCCTTTCACCTCTTTCACTG 453
**** * * * * ** *** ** ** **** * ** * * * **
consensus_12639#1 GAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTA-GCAATATACTGCTTGA 463
consensus_12639#3 GAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTA-GCAATATACTGCTTGA 466
consensus_12639#0 GAGGAGTCTGCAATAAGGATTGTGCACAGAGATATCAAGGCTA-GCAATATACTGCTTGA 2567
consensus_12639#2 ACATATTACGGGCTCTGCATGCATAACGGGAGTTACACCGTTAAGCTTCATTTTGCT-GA 512
* * * * * ** ** * * ** * ** ** ** **** **
consensus_12639#1 CAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCA 523
consensus_12639#3 CAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCA 526
consensus_12639#0 CAAAGACTTGAGTGCCAAGATCTCCGATTTTGGGCTAGCAAAGCTTAACGATGATGATCA 2627
consensus_12639#2 AATTGTTTTCACAAATGACAGCACATACTGCAGCCTTGGCAAAAGAAGATTCAATGTGTT 572
* * ** * * * * * * * * ** * ** * ***
consensus_12639#1 CACACACATAAGTACAAGAATAGCTGGGACT---ATCGGATACATGGCTCCTGAGTATGC 580
consensus_12639#3 CACACACATAAGTACAAGAATAGCTGGGACT---ATCGGATACATGGCTCCTGAGTATGC 583
consensus_12639#0 CACACACATAAGTACAAGAATAGCTGGGACT---ATCGGATACATGGCTCCTGAGTATGC 2684
consensus_12639#2 TATACAGGGAAGAATGGTTTTAGAGGACTTTGACATTGAACAGTCAGCTGGAGGAGCTGC 632
* *** *** * *** * * ** * * * *** * ***
consensus_12639#1 AATGCGTGGTTATTT-GACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGG 639
consensus_12639#3 AATGCGTGGTTATTT-GACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGG 642
consensus_12639#0 AATGCGTGGTTATTT-GACAGACAAAGCTGATGTTTACAGTTTTGGGGTTGTTGCTTTGG 2743
consensus_12639#2 GAAG-GCAGTTATCAAGACTTTCACGGCAAACGTC-ACAAATCATACACTGGAAATTCAT 690
* * * ***** *** ** ** * ** *** * ** **
consensus_12639#1 AAATTGTTAGTGGAAAAAGTAACA-CAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTT 698
consensus_12639#3 AAATTGTTAGTGGAAAAAGTAACA-CAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTT 701
consensus_12639#0 AAATTGTTAGTGGAAAAAGTAACA-CAAGCTACAGGCCAAAGGAAGATTTTGTTTATCTT 2802
consensus_12639#2 TTTTATTGGGCAGGAAGGGGGACAACAGGCATTCCAAAAAGAGGATATTATGGTCCTCTG 750
* * * * ** * *** ** ** ** * * *** ** * ***
consensus_12639#1 CTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCT----CCTGGAGCTGGTAGATCC 754
consensus_12639#3 CTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCT----CCTGGAGCTGGTAGATCC 757
consensus_12639#0 CTCGATTGGGCTTGTGTTCTACATGAGCGAGGAAATCT----CCTGGAGCTGGTAGATCC 2858
consensus_12639#2 ATATCTGCAATATCAGTAGTAC-CAAGTATGGCATTTTGACATTTGAATCTATTGAATTT 809
* * * ** *** ** ** * * * ** * ** * **
consensus_12639#1 AGA-GTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCC 813
consensus_12639#3 AGA-GTTAGGCTCCGATTACTCAACGGAAAGAGCGCTCCTCATGCTGA------------ 804
consensus_12639#0 AGA-GTTAGGCTCCGATTACTCAACGGAAGAGGCGCTCCTCATGCTGAATGTTGCCCTCC 2917
consensus_12639#2 GAATGACATGTTTC-ATTAATCACTATGAGCAATGGTACA-GCGTTGAACAACACATTCA 867
* * * * * * **** *** * * * * * ***
consensus_12639#1 -TGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTT 872
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 -TGTGCACCAATGCAGCACCAACACTGAGACCAAAGATGACCAAAGTTTTGAGCCTGCTT 2976
consensus_12639#2 GTGCCCTTCAAAACTTTGACTGATTGTATAATGATTTTCAGGGAAAAATGTTATATTCTT 927
consensus_12639#1 GAGGGGCACACACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTG 932
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 GAGGGGCACATACCACTTCAACCATTTCTGTCAGACCTCAGCCTTGCTGCAAACAGCCTG 3036
consensus_12639#2 TTC--------------------------------------------------------- 930
consensus_12639#1 AGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATG 992
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGCTCAAGCGGTCAGCGCAGGAACTTCTGGCAAACACTAAGTGATCAGAGCCAAAGCATG 3096
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 ACAGCAGCACAAGCATCATCTAGCAACACCAATGAGTCATCATCTTTAGATGTTGATGGT 1052
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 ACTGCAGCACAAGCATCATCCAGCAACACCAATGAGTCATCATCTTTAGATATTGCTGGT 3156
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 AGCCTGAGACCTTAGGTGAGTTTAAATGTCAGAA-------GTGTTTCATGAGCTCTGTA 1105
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGCCTGAGACCTTAGGTGAGTTTAAATGTCAGAACTCAGAAGTGTTTCATGAGCTCTGTA 3216
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 CATGTAAGAACCATTAGGATTAGGTCATTTTGTCTGTCTTAGAAGTACAGTGTAAATACC 1165
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 CATGTAAGAACCATTAGGAGTAGGTCATTTTGTCTCTTTTAGAAGTACAGTGTAAATACC 3276
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 AGACTAGTGTCAGATCCTACTATTAAGATGGACACACTCTGCATGAGAGCAGATGAAATC 1225
consensus_12639#3 ------------------------------------------------------------
consensus_12639#0 AGACTAGTGTCAGATCCTACTATTAAGATGGACACTCTGCTTAAATCTTTAGGATAGTGA 3336
consensus_12639#2 ------------------------------------------------------------
consensus_12639#1 TTTAGGATGGTGAATTTGC 1244
consensus_12639#3 -------------------
consensus_12639#0 ATTTTATATATGGCC---- 3351
consensus_12639#2 -------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||