cluster # 12671

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Oryza sativa
cluster # 12671 cluster # 12671 Sequences # 11 consensus # 7

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_12671#0 length = 1486 sequences # 1
consensus_12671#1 length = 912 sequences # 2
consensus_12671#2 length = 865 sequences # 2

consensus_12671#3 length = 719 sequences # 3
consensus_12671#4 length = 513 sequences # 1
consensus_12671#5 length = 444 sequences # 1
consensus_12671#6 length = 345 sequences # 1

consensusID : consensus_12671#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1486
fasta sequence

                              [AATCTACCTGGAAGAACAAACTGCTCGCCCCCGCGTCGCCCACGCGCGGGCGACACGGGGGGAAACCCTAGCGCCGCCTCCGCCACTCTCTCCTCCTCTCCCTCCCCTCGCCGCTGCCGGAACGCGCCGCCGGAGAACCGCGCGGCCAGCCGGGATGGCGGCGGCGAGGCCAACCCCCGACGGCGCCCCGTCTCCGCGCGTGGATGGCGGGCCGGCGCGTGGTGCAAGGCTGACGACGCGGCGTGGAGACGGTGGATCCGGCGCCGCTGCGGCCGGATCTGGCCTCCCCGCGGTTGGATCCGGCGGATCCACGCCGGATCTGGCCGGAGGCGGCGGCGGCTAGCGGCTGGTGGCTGGTGGCTGGCGGCGACGACGAGAGCCGGAGGCTGGTGGCTGGCGGCCGCTGGCGAAGGAGGCCGGTGCATGCAGAGGATGCAGTGGCGACGGCGAGGCCACGGTGGCGGAGGCGGTGGAGGATGGCGCGGGGAGACGCGGCTGGAGGCCGACGCATGCGGAGGCCGCGGACGGCGATGCGACTGGAGGCTGCGGAGGCCGGCGCACATGGAGGCGCGGCTGGAGGCCGGCGTGCGTGGAGGCCGTGGTGGCGGCCGCAGCGGAGGCTCGGCCGATGACGGCGGAGGGCGACGTGGCACAGCCGGCGACAGGGGACGGCTACAAGGCGCGACGGATCGGCGGTGGTGAAGCCCGTCGGCGGTGGTGACGGTGAGGCGATGGCTGCGGTGAGGAGGACGGAGGCGACGGCGATGCGACCAAGCACCCGTTGACACGGCGGTTTGATCGAGGCGGCGATGACGGTCATGCTGTGAGGGGGGTGTTGAAGCCTGCGGCGAGCTTCCATCCAGGCGTCTGCCTTCTTGCGGTGGCGGCTTGCCGCCGAAAGATGGCCACGCTGGACGGGCGAGTGCGGGGAGAGGGGATCCATTCTTCTCTCTCACCTTCTCCCTCTCCAACCCAACCACGTGGATGGACGTGAAGCGCGGTGAAGGTTGAGACTCTTCTTTGATGGCCGGACGGTGGCGAGGCGTCGGCGCGGTGGCTACGTGTCAAAGGGAATTAGATGGTGGTTCTGCTAAACTGGCATGCACTTTTTGACGCGGGAGAGTAGAACAACAGGCGAAAGCCTAGCTTTCGGGCCGGCAACGGCGACGCCTACGGGCGCCGTTTTCCCCTTGGGGCATTGTCGTGTTTTCTATTTTTCCCAGTGGGTTCTTCAGGTGAAAACCTCGTCCTGGTTACCTAGGACGGACGGTGGCGGCGCTTTTGTCGTCGTTTTCCTTCTTGGAGGCATCGTTTAGAAGTCCTATTCCTTTGGGGTGTTGTGTGCTTGTTTTGTTTTAAACAGTAGGATCAGACGTAGACGCGTGGTGTGGTTGTATATTTTCTTTTTCCTGACTACAGTCTCCCAGGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACGTCGCACTATCTTGTGC]

[+] EMBL AK107450             [AATCTACCTGGAAGAACAAACTGCTCGCCCCCGCGTCGCCCACGCGCGGGCGACACGGGGGGAAACCCTAGCGCCGCCTCCGCCACTCTCTCCTCCTCTCCCTCCCCTCGCCGCTGCCGGAACGCGCCGCCGGAGAACCGCGCGGCCAGCCGGGATGGCGGCGGCGAGGCCAACCCCCGACGGCGCCCCGTCTCCGCGCGTGGATGGCGGGCCGGCGCGTGGTGCAAGGCTGACGACGCGGCGTGGAGACGGTGGATCCGGCGCCGCTGCGGCCGGATCTGGCCTCCCCGCGGTTGGATCCGGCGGATCCACGCCGGATCTGGCCGGAGGCGGCGGCGGCTAGCGGCTGGTGGCTGGTGGCTGGCGGCGACGACGAGAGCCGGAGGCTGGTGGCTGGCGGCCGCTGGCGAAGGAGGCCGGTGCATGCAGAGGATGCAGTGGCGACGGCGAGGCCACGGTGGCGGAGGCGGTGGAGGATGGCGCGGGGAGACGCGGCTGGAGGCCGACGCATGCGGAGGCCGCGGACGGCGATGCGACTGGAGGCTGCGGAGGCCGGCGCACATGGAGGCGCGGCTGGAGGCCGGCGTGCGTGGAGGCCGTGGTGGCGGCCGCAGCGGAGGCTCGGCCGATGACGGCGGAGGGCGACGTGGCACAGCCGGCGACAGGGGACGGCTACAAGGCGCGACGGATCGGCGGTGGTGAAGCCCGTCGGCGGTGGTGACGGTGAGGCGATGGCTGCGGTGAGGAGGACGGAGGCGACGGCGATGCGACCAAGCACCCGTTGACACGGCGGTTTGATCGAGGCGGCGATGACGGTCATGCTGTGAGGGGGGTGTTGAAGCCTGCGGCGAGCTTCCATCCAGGCGTCTGCCTTCTTGCGGTGGCGGCTTGCCGCCGAAAGATGGCCACGCTGGACGGGCGAGTGCGGGGAGAGGGGATCCATTCTTCTCTCTCACCTTCTCCCTCTCCAACCCAACCACGTGGATGGACGTGAAGCGCGGTGAAGGTTGAGACTCTTCTTTGATGGCCGGACGGTGGCGAGGCGTCGGCGCGGTGGCTACGTGTCAAAGGGAATTAGATGGTGGTTCTGCTAAACTGGCATGCACTTTTTGACGCGGGAGAGTAGAACAACAGGCGAAAGCCTAGCTTTCGGGCCGGCAACGGCGACGCCTACGGGCGCCGTTTTCCCCTTGGGGCATTGTCGTGTTTTCTATTTTTCCCAGTGGGTTCTTCAGGTGAAAACCTCGTCCTGGTTACCTAGGACGGACGGTGGCGGCGCTTTTGTCGTCGTTTTCCTTCTTGGAGGCATCGTTTAGAAGTCCTATTCCTTTGGGGTGTTGTGTGCTTGTTTTGTTTTAAACAGTAGGATCAGACGTAGACGCGTGGTGTGGTTGTATATTTTCTTTTTCCTGACTACAGTCTCCCAGGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACGTCGCACTATCTTGTGC]




>consensus_12671#0
AATCTACCTGGAAGAACAAACTGCTCGCCCCCGCGTCGCCCACGCGCGGGCGACACGGGG
GGAAACCCTAGCGCCGCCTCCGCCACTCTCTCCTCCTCTCCCTCCCCTCGCCGCTGCCGG
AACGCGCCGCCGGAGAACCGCGCGGCCAGCCGGGATGGCGGCGGCGAGGCCAACCCCCGA
CGGCGCCCCGTCTCCGCGCGTGGATGGCGGGCCGGCGCGTGGTGCAAGGCTGACGACGCG
GCGTGGAGACGGTGGATCCGGCGCCGCTGCGGCCGGATCTGGCCTCCCCGCGGTTGGATC
CGGCGGATCCACGCCGGATCTGGCCGGAGGCGGCGGCGGCTAGCGGCTGGTGGCTGGTGG
CTGGCGGCGACGACGAGAGCCGGAGGCTGGTGGCTGGCGGCCGCTGGCGAAGGAGGCCGG
TGCATGCAGAGGATGCAGTGGCGACGGCGAGGCCACGGTGGCGGAGGCGGTGGAGGATGG
CGCGGGGAGACGCGGCTGGAGGCCGACGCATGCGGAGGCCGCGGACGGCGATGCGACTGG
AGGCTGCGGAGGCCGGCGCACATGGAGGCGCGGCTGGAGGCCGGCGTGCGTGGAGGCCGT
GGTGGCGGCCGCAGCGGAGGCTCGGCCGATGACGGCGGAGGGCGACGTGGCACAGCCGGC
GACAGGGGACGGCTACAAGGCGCGACGGATCGGCGGTGGTGAAGCCCGTCGGCGGTGGTG
ACGGTGAGGCGATGGCTGCGGTGAGGAGGACGGAGGCGACGGCGATGCGACCAAGCACCC
GTTGACACGGCGGTTTGATCGAGGCGGCGATGACGGTCATGCTGTGAGGGGGGTGTTGAA
GCCTGCGGCGAGCTTCCATCCAGGCGTCTGCCTTCTTGCGGTGGCGGCTTGCCGCCGAAA
GATGGCCACGCTGGACGGGCGAGTGCGGGGAGAGGGGATCCATTCTTCTCTCTCACCTTC
TCCCTCTCCAACCCAACCACGTGGATGGACGTGAAGCGCGGTGAAGGTTGAGACTCTTCT
TTGATGGCCGGACGGTGGCGAGGCGTCGGCGCGGTGGCTACGTGTCAAAGGGAATTAGAT
GGTGGTTCTGCTAAACTGGCATGCACTTTTTGACGCGGGAGAGTAGAACAACAGGCGAAA
GCCTAGCTTTCGGGCCGGCAACGGCGACGCCTACGGGCGCCGTTTTCCCCTTGGGGCATT
GTCGTGTTTTCTATTTTTCCCAGTGGGTTCTTCAGGTGAAAACCTCGTCCTGGTTACCTA
GGACGGACGGTGGCGGCGCTTTTGTCGTCGTTTTCCTTCTTGGAGGCATCGTTTAGAAGT
CCTATTCCTTTGGGGTGTTGTGTGCTTGTTTTGTTTTAAACAGTAGGATCAGACGTAGAC
GCGTGGTGTGGTTGTATATTTTCTTTTTCCTGACTACAGTCTCCCAGGACTATAGGCTTG
TATTTTATTCCTTCTTTATCAATAGAAACGTCGCACTATCTTGTGC

consensusID : consensus_12671#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 912
fasta sequence

                              [AATTAACTTGCATGCTCTCCAAGAAACTGATGCATCACAGTAACACACAGCCACCAATTCACATGTTTCCAGTTCATTTTTCATCAAATACACACTATTACTATCCTATCTACAGAAAGGCATCTCTATCTCTAACAATTTGCTGCTGCTATCTTGGCAGGAACCCGTACTGCGAGACCGGAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGAGATCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGCTGCCTCCACGGCGCCGCAGGGCGGGTCGCCGCAGATGGCCTTCTGCAGCGTGCTGCCGTAGAAGAGGATCTTCCTGTTGTGGTCGTCGACGAGCATGGCGTAGAGCTGCCTGTTGGAGCAGAACACGGACAGCCTCGGCTTCGTCGCCGTGCCATTGAACTTCTTCTGCAGCCTGCGGTTCCTGACCTTGGGGTTCTCCTTCCTCGCGCCGTGCCTCGCCGAGGCCTCGATCCTCGGGTACGAGCGCCGGCGCCCGACTCCGCCGGCGCCGCCTGCAGAAGCCGGAGTGAAGAACTGCACGCCAGGCGAGCTGGGAGGGCGGCAGCACGCCGGGCGCGGCGAGAATGGCAGCCCGGGGGCCGCGCGGAGCGATGCCATGGCACGCCCACGGGTGGAGACCTTGGCTAGCTGCTTGGGGTGGGCACGCAATCCGTCGAGCAGGTGCGGCGCGGAATACCCGGTGGGAGCTGCTACAGTGCCCGAGATTAGGATTTAGGAATGGGATTTGTCCTCACTTNTGGGGCCCCACCTGTCACCTGACAGGTAATACAAGGCTTAAGCAAGGGTGTAATCGCAAAATTCCCCCTCGAGTTTATTCTTTCCGTATCCAAAAA]

[-] EMBL AK068500             [AATTAACTTGCATGCTCTCCAAGAAACTGATGCATCACAGTAACACACAGCCACCAATTCACATGTTTCCAGTTCATTTTTCATCAAATACACACTATTACTATCCTATCTACAGAAAGGCATCTCTATCTCTAACAATTTGCTGCTGCTATCTTGGCAGGAACCCGTACTGCGAGACCGGAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGAGATCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGCTGCCTCCACGGCGCCGCAGGGCGGGTCGCCGCAGATGGCCTTCTGCAGCGTGCTGCCGTAGAAGAGGATCTTCCTGTTGTGGTCGTCGACGAGCATGGCGTAGAGCTGCCTGTTGGAGCAGAACACGGACAGCCTCGGCTTCGTCGCCGTGCCATTGAACTTCTTCTGCAGCCTGCGGTTCCTGACCTTGGGGTTCTCCTTCCTCGCGCCGTGCCTCGCCGAGGCCTCGATCCTCGGGTACGAGCGCCGGCGCCCGACTCCGCCGGCGCCGCCTGCAGAAGCCGGAGTGAAGAACTGCACGCCAGGCGAGCTGGGAGGGCGGCAGCACGCCGGGCGCGGCGAGAATGGCAGCCCGGGGGCCGCGCGGAGCGATGCCATGGCACGCCCACGGGTGGAGACCTTGGCTAGCTGCTTGGGGTGGGCACGCAATCCGTCGAGCAGGTGCGGCGCGGA                                                                                                                                                                 ]
[+] EMBL AU222639             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGATCNTNGGGTACGAGCGCCGGCGCCCGACTCCGCCGGCGCCGCCTGCAGAAGCCGGAGTGAAGAACTGCACGCCAGGCGAGCTGGGAGGGCGGCAGCACGCCGGGCGCGGCGAGAATGGCAGCCCGGGGGCCGCGCGGAGCGATGCCATGGCACGCCCACGGGTGGAGACCTTGGCTAGCTGCTTGGGGTGGGCAGGCAATCCGTCGAGCAGGTGCGGCGCGGAATACCCGGTGGGAGCTGCTACAGTGCCCGAGATTAGGATTTAGGAATGGGATTTGTCCTCACTTNTGGGGCCCCACCTGTCACCTGACAGGTAATACAAGGCTTAAGCAAGGGTGTAATCGCAAAATTCCCCCTCGAGTTTATTCTTTCCGTATCCAAAAA]




>consensus_12671#1
AATTAACTTGCATGCTCTCCAAGAAACTGATGCATCACAGTAACACACAGCCACCAATTC
ACATGTTTCCAGTTCATTTTTCATCAAATACACACTATTACTATCCTATCTACAGAAAGG
CATCTCTATCTCTAACAATTTGCTGCTGCTATCTTGGCAGGAACCCGTACTGCGAGACCG
GAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGAGA
TCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGCTG
CCTCCACGGCGCCGCAGGGCGGGTCGCCGCAGATGGCCTTCTGCAGCGTGCTGCCGTAGA
AGAGGATCTTCCTGTTGTGGTCGTCGACGAGCATGGCGTAGAGCTGCCTGTTGGAGCAGA
ACACGGACAGCCTCGGCTTCGTCGCCGTGCCATTGAACTTCTTCTGCAGCCTGCGGTTCC
TGACCTTGGGGTTCTCCTTCCTCGCGCCGTGCCTCGCCGAGGCCTCGATCCTCGGGTACG
AGCGCCGGCGCCCGACTCCGCCGGCGCCGCCTGCAGAAGCCGGAGTGAAGAACTGCACGC
CAGGCGAGCTGGGAGGGCGGCAGCACGCCGGGCGCGGCGAGAATGGCAGCCCGGGGGCCG
CGCGGAGCGATGCCATGGCACGCCCACGGGTGGAGACCTTGGCTAGCTGCTTGGGGTGGG
CACGCAATCCGTCGAGCAGGTGCGGCGCGGAATACCCGGTGGGAGCTGCTACAGTGCCCG
AGATTAGGATTTAGGAATGGGATTTGTCCTCACTTNTGGGGCCCCACCTGTCACCTGACA
GGTAATACAAGGCTTAAGCAAGGGTGTAATCGCAAAATTCCCCCTCGAGTTTATTCTTTC
CGTATCCAAAAA

consensusID : consensus_12671#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 865
fasta sequence

                              [CATACCATTCTAAAAAAAATAAAAAAAAACCAAATCCTTCTCTTCATTCCCAGCCTCCGTGACGCACGAGCAGAGTCCGTCGCCTCGCTTCCTCCGCCACCGCCAGCCCTTCCTCACCATCGCCACTTCCTCCAACGCCGGCGCCTCTCTTCCTTGGCTGGCGCCCATCCTCTCCTCCTCGACCAGCGCCTCAACTACAGATCCCCTCTCCAGTCTCATTTTCACTCGTCCCAGCCTCACNCCTGCGGCGGCGGCGGCGCTGTCGATTCACCGGCGGCGGCACNAGCGACGGCCAACGAGATCGGATTGTCTAAGGGGTTGGGATTTTGGGGGGGGTATGGCTCCGTCTGAGTGCCCGCCGTGGTGACAGGTGGGGCCCCAGAAATGAGGACAAATATCATTCATAAATCCTAATCTCGGGTACTGTAGAGCTCCCCCCGGGATTCCGCGCCCCACCTGCTCGACAGATTGCCCACCCCAAGCAGCTAGCCAGGTCTCCCCATGGCATCGCTCCGCGCGGCAACCGGGCTGCCATTCTCGCCGCGCCCGGCGTGCTGCCGCCCTCCCAGCTCGCCAGGCTCCAGGCGTGGCTTCGTGTTCCCGCCGCGCTTCGCACCTGGCGTGTTCCTTTTCTTTCCGCTGGATTCTGCAGGCGGCGGCGGAGTAGCTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGACCACAACAAGAAGATCCTCTTCTATG]

[+] EMBL C73161               [CATACCATTCTAAAAAAAATAAAAAAAAACCAAATCCTTCTCTTCATTCCCAGCCTCCGTGACGCACGAGCAGAGTCCGTCGCCTCGCTTCCTCCGCCACCGCCAGCCCTTCCTCACCATCGCCACTTCCTCCAACGCCGGCGCCTCTCTTCCTTGGCTGGCGCCCATCCTCTCCTCCTCGACCAGCGCCTCAACTACAGATCCCCTCTCCAGTCTCATTTTCACTCGTCCCAGCCTCACNCCTGCGGCGGCGGCGGCGCTGTCGATTCACCGGCGGCGGCACNAGCGACGGCCAACGAGATCGGATTGTCTAAGGGGTTGGGATTTTGGGGGGGGTATGGCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB642234             [                                                                       AGAGTCCGTCGCCTCGCTTCCTCCGCCACCGCCAGCCCTTCCTCACCATCGCCACTTCCTCCAACGCCGGCGCCTCTCTTCCTTGGCTGGCGCCCATCCTCTCCTCCTCGACCAGCGCCTCAACTACAGATCCCCTCTCCAGTCTCATTTTCACTCGTCCCAGCCTCACTCCTGCGGCGGCGGCGGCGCTGTCGATTCACCGGCGGCGGCAC TGCGACGGCCAACGAGATCGGATTGTCTA  GGGTTTGGATTTT  GGGGGTTATGGCTCCGTCTGAGTGCCCGCCGTGGTGACAGGTGGGGCCCCAGAAATGAGGACAAATATCATTCATAAATCCTAATCTCGGGTACTGTAGAGCTCCCCCCGGGATTCCGCGCCCCACCTGCTCGACAGATTGCCCACCCCAAGCAGCTAGCCAGGTCTCCCCATGGCATCGCTCCGCGCGGCAACCGGGCTGCCATTCTCGCCGCGCCCGGCGTGCTGCCGCCCTCCCAGCTCGCCAGGCTCCAGGCGTGGCTTCGTGTTCCCGCCGCGCTTCGCACCTGGCGTGTTCCTTTTCTTTCCGCTGGATTCTGCAGGCGGCGGCGGAGTAGCTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGACCACAACAAGAAGATCCTCTTCTATG]




>consensus_12671#2
CATACCATTCTAAAAAAAATAAAAAAAAACCAAATCCTTCTCTTCATTCCCAGCCTCCGT
GACGCACGAGCAGAGTCCGTCGCCTCGCTTCCTCCGCCACCGCCAGCCCTTCCTCACCAT
CGCCACTTCCTCCAACGCCGGCGCCTCTCTTCCTTGGCTGGCGCCCATCCTCTCCTCCTC
GACCAGCGCCTCAACTACAGATCCCCTCTCCAGTCTCATTTTCACTCGTCCCAGCCTCAC
NCCTGCGGCGGCGGCGGCGCTGTCGATTCACCGGCGGCGGCACNAGCGACGGCCAACGAG
ATCGGATTGTCTAAGGGGTTGGGATTTTGGGGGGGGTATGGCTCCGTCTGAGTGCCCGCC
GTGGTGACAGGTGGGGCCCCAGAAATGAGGACAAATATCATTCATAAATCCTAATCTCGG
GTACTGTAGAGCTCCCCCCGGGATTCCGCGCCCCACCTGCTCGACAGATTGCCCACCCCA
AGCAGCTAGCCAGGTCTCCCCATGGCATCGCTCCGCGCGGCAACCGGGCTGCCATTCTCG
CCGCGCCCGGCGTGCTGCCGCCCTCCCAGCTCGCCAGGCTCCAGGCGTGGCTTCGTGTTC
CCGCCGCGCTTCGCACCTGGCGTGTTCCTTTTCTTTCCGCTGGATTCTGCAGGCGGCGGC
GGAGTAGCTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGG
AAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACG
AAGCCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGAC
CACAACAAGAAGATCCTCTTCTATG

consensusID : consensus_12671#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 719
fasta sequence

                              [GCGACCAAGCACCCGTTGACACGGGCGGTCTGGTCGAGGCGGCAACGACGGTCATGCTGTGAGGGTGGGTGTTCAAGCCTGTGGCAAGCTTCCTTCCAGGCGTCTGCCCTCTTACGGTGGCGGCTTGCCG-CGAAAGATGGCCACAGTGGACGAGCGAGTGCGGGGGAGAGGGGATCCATTCTTCTCTCTCACCCTCTCCCTCTCCAACCCAACCACGTGGATGGATGTGAAGCGCGGTGAAGGTTAGGACTCTTCTTCGATGGCTAGCCGGCGGCGAGGCGTCGGCGCGGTGGCTGCGCGTCGAAGGGGATTAGATGGTGGTTCTGCTGAACTGGCATGCACTTTTTAACGCGGGAGAGTAGAACAACGGGCGAAAGCCTAGCCTTCGGGCCGGCAACGGCGACGCTGCGGGCGCCGTTTTCCCCTTGGGGTGTTGCCGTGTTTTCTATTTTCCCAGTGGGTTCTTCTTGGAGACGTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCAGACGTATAAGCGTGGTGTGGTTGTTTATTTTCTTTTTCCTGACTATAGTCTCCCAGGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACATCATACTATCTTATGCGGGTTGTTTCAAAAAAAATGGCCGGGAAAACAAAATAAGGCTTTGCAGACAATTTTTAAAAAAA]

[+] EMBL AU078772             [GCGACCAAGCACCCGTTGACACGGGCGGTCTGGTCGAGGCGGCAACGACGGTCATGCTGTGAGGGTGGGTGTTCAAGCCTGTGGCAAGCTTCCTTCCAGGCGTCTGCCCTCTTACGGTGGCGGCTTGCCG CGAAAGATGGCCACAGTGGACGAGCGAGTGCGGGGGAGAGGGGATCCATTCTTCTCTCTCACCCTCTCCCTCTCCAACCCAACCACGTGGATGGATGTGAAGCGCGGTGAAGGTTAGGACTCTTCTTCGATGGCTAGCCGGCGGCGAGGCGTCGGCGCGGTGGCTGCGCGTCGAAGGGGATTAGATGGTGGTTCTGCTGAACTGGCATGCACTTTTTAACGCGGGAGAGTAG                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU078773             [           aCCNTTGACACGGNCGGTCTGGTCGAGCCGGCAACGACGGTCATGCTGTGAGGGTGGGTGTTCAAG CTGTGGCAAGCTTCCTTCCAGGCGTCTGCCCTCTTACGGTGGC GCTTGCCGCCGAAAGATGGCCACAGTGGACGAGCGAGTGCGGGGGAGAGGGGATCCATTCTTCTCTCTCACCCTCTCCCTCTCCAACCCAACCACGTGGATGGATGTGAAGCGCGGTGAAGGTTAGGACTCTTCTTCGATGGCTAGCCGGCGGCGAGGCGTCGGCGCGGT GNTGCGCGTCGAAGGGGATTAGATGGTGGTTCTGCTGAACTGGCATGCACTTTTTAACGCGGGAGAGTAGAACAACGGGCGAAAGCCTAGCCTTCGGGCCGGCAACGGCGACGCTGCGGGCGCCGTTTTCCCCTTGGGGTGTTGCCGTGTTTTCTATTTTCCCAGTGGGTTCTTCTTGGAGACGTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCAGACGTATAAGCGTGGTGTGGTTGTTTATTTTCTTTTTCCTGACTATAGTCTCCCAGGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACATCATACTATCTTATGCGGGTTGTTTCAAAAAAAATGGCCGGGAAAACAAAATAAGGCTTTGCAGACAATTTTTAAAAAAA]
[+] EMBL C99135               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gttttcCTTCTTGGAGACGTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCAGACGTATAAGCGTGGTGTGGTTGTTTATTTTCTTTTTCCTGACTATAGTCTCCCAGGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACATCATACTATCTTAaaaaaa                                                             ]




>consensus_12671#3
GCGACCAAGCACCCGTTGACACGGGCGGTCTGGTCGAGGCGGCAACGACGGTCATGCTGT
GAGGGTGGGTGTTCAAGCCTGTGGCAAGCTTCCTTCCAGGCGTCTGCCCTCTTACGGTGG
CGGCTTGCCGCGAAAGATGGCCACAGTGGACGAGCGAGTGCGGGGGAGAGGGGATCCATT
CTTCTCTCTCACCCTCTCCCTCTCCAACCCAACCACGTGGATGGATGTGAAGCGCGGTGA
AGGTTAGGACTCTTCTTCGATGGCTAGCCGGCGGCGAGGCGTCGGCGCGGTGGCTGCGCG
TCGAAGGGGATTAGATGGTGGTTCTGCTGAACTGGCATGCACTTTTTAACGCGGGAGAGT
AGAACAACGGGCGAAAGCCTAGCCTTCGGGCCGGCAACGGCGACGCTGCGGGCGCCGTTT
TCCCCTTGGGGTGTTGCCGTGTTTTCTATTTTCCCAGTGGGTTCTTCTTGGAGACGTCGT
TTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCA
GACGTATAAGCGTGGTGTGGTTGTTTATTTTCTTTTTCCTGACTATAGTCTCCCAGGACT
ATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACATCATACTATCTTATGCGGGTT
GTTTCAAAAAAAATGGCCGGGAAAACAAAATAAGGCTTTGCAGACAATTTTTAAAAAAA

consensusID : consensus_12671#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 513
fasta sequence

                              [TTTGAAAGTGCNACCCAAGCAGTAGCAGTTTCCCANGCTTGTCGGGGGCACCGGNTNCATTTTGCCGCCCCGGNGTGTGCCCCTTCCNAGTTGCCAGGNTCCAGGGTGGTTTGTGTTCCCCCNGCGTTTGCAACNTGGGTGTTCNTTTTCTTTCCGTTGGATTCTGCAGGCGGCGGCGGAGTAGTTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGACCACAACAAGAAGATCCTCTTCTATGGCAGCACCCTGCAGAAGGCCATCTGCGGTGACCCTCCCTGCGGCGCCGTGGAGGCAGCTGGGAGGATCGGGGAGGAGCTCATCAGGGCGTGCAAGGAGCTGGACATCACCGAGATCTCGTCCTACGACCGC]

[+] EMBL AA753612             [TTTGAAAGTGCNACCCAAGCAGTAGCAGTTTCCCANGCTTGTCGGGGGCACCGGNTNCATTTTGCCGCCCCGGNGTGTGCCCCTTCCNAGTTGCCAGGNTCCAGGGTGGTTTGTGTTCCCCCNGCGTTTGCAACNTGGGTGTTCNTTTTCTTTCCGTTGGATTCTGCAGGCGGCGGCGGAGTAGTTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGACCACAACAAGAAGATCCTCTTCTATGGCAGCACCCTGCAGAAGGCCATCTGCGGTGACCCTCCCTGCGGCGCCGTGGAGGCAGCTGGGAGGATCGGGGAGGAGCTCATCAGGGCGTGCAAGGAGCTGGACATCACCGAGATCTCGTCCTACGACCGC]




>consensus_12671#4
TTTGAAAGTGCNACCCAAGCAGTAGCAGTTTCCCANGCTTGTCGGGGGCACCGGNTNCAT
TTTGCCGCCCCGGNGTGTGCCCCTTCCNAGTTGCCAGGNTCCAGGGTGGTTTGTGTTCCC
CCNGCGTTTGCAACNTGGGTGTTCNTTTTCTTTCCGTTGGATTCTGCAGGCGGCGGCGGA
GTAGTTCGCCGGCGCGCGTACCCGAGGATCGAGGCCACGGCGAGGCACGGCGCGAGGAAG
GAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGAAGAAGTTCAATGGCACGGCGACGAAG
CCGAGGCTATCCGTGTTCTGCTCCAACAGGCAGCTCTATGCCATGCTCGTCGACGACCAC
AACAAGAAGATCCTCTTCTATGGCAGCACCCTGCAGAAGGCCATCTGCGGTGACCCTCCC
TGCGGCGCCGTGGAGGCAGCTGGGAGGATCGGGGAGGAGCTCATCAGGGCGTGCAAGGAG
CTGGACATCACCGAGATCTCGTCCTACGACCGC

consensusID : consensus_12671#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence

                              [CTTGAATTAATTGCATGCTCTCCAAGAAACTGATGCATCACAGAACCCGTACTGCGAGACCGGAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGAGATCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGCTGCCTCCTGTCACAACAAGCCAGCCAGCTCAAGATATCAATACAATGAGCAGTTTATGTCTAATTACTAGGTGAAATTCTTGGAGGCGTCGTTTAGAAGTCCTATTCCTTTAGGGTGTTGTGTGCTTATNTTGTNTTAAGTAGTAGGATCAGACGTAGACGCGTGGTGTGGTTGTATATTTTCTTTTTCCTGTCTATAGTCTCCCAGGACTGTAGGCTTGTATTTTATTCCTTCAATAGAAACATCGCACTATCTTGTGCGGGT]

[+] EMBL C74907               [CTTGAATTAATTGCATGCTCTCCAAGAAACTGATGCATCACAGAACCCGTACTGCGAGACCGGAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGAGATCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGCTGCCTCCTGTCACAACAAGCCAGCCAGCTCAAGATATCAATACAATGAGCAGTTTATGTCTAATTACTAGGTGAAATTCTTGGAGGCGTCGTTTAGAAGTCCTATTCCTTTAGGGTGTTGTGTGCTTATNTTGTNTTAAGTAGTAGGATCAGACGTAGACGCGTGGTGTGGTTGTATATTTTCTTTTTCCTGTCTATAGTCTCCCAGGACTGTAGGCTTGTATTTTATTCCTTCAATAGAAACATCGCACTATCTTGTGCGGGT]




>consensus_12671#5
CTTGAATTAATTGCATGCTCTCCAAGAAACTGATGCATCACAGAACCCGTACTGCGAGAC
CGGAACCTCGAACGCCATCATCTTCTCCCCTCGAGCAAACCCGTTGCGGTCGTAGGACGA
GATCTCGGTGATGTCCAGCTCCTTGCACGCCCTGATGAGCTCCTCCCCGACCCTCCCAGC
TGCCTCCTGTCACAACAAGCCAGCCAGCTCAAGATATCAATACAATGAGCAGTTTATGTC
TAATTACTAGGTGAAATTCTTGGAGGCGTCGTTTAGAAGTCCTATTCCTTTAGGGTGTTG
TGTGCTTATNTTGTNTTAAGTAGTAGGATCAGACGTAGACGCGTGGTGTGGTTGTATATT
TTCTTTTTCCTGTCTATAGTCTCCCAGGACTGTAGGCTTGTATTTTATTCCTTCAATAGA
AACATCGCACTATCTTGTGCGGGT

consensusID : consensus_12671#6
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 345
fasta sequence

                              [CGTCGGCGCGGTNGCTGCGCGTNGAAGGGGATTAGATGGTGGTTCTNCTGAACTGGCATGCACTTTTTAACGCGGGANAGTAGAACAACGGGCGAAANCTAGCCTTCGGGCCGGCAACNGCGACNCCTGCGGGCGCCGTTTTCCCCTTGGGGTGTTNCCGTGTTTTCTATTTTCCCAGTNGGTTCTTCAGGTGAAAACCTTGTCCTGGTTACCTAGGACGAACNGCGGCGGCGCTTTTNGCGTCGTTTTCCTTCTTGGAGACNTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCAGACGTATAANCGTGGTGT]

[+] EMBL C99134               [CGTCGGCGCGGTNGCTGCGCGTNGAAGGGGATTAGATGGTGGTTCTNCTGAACTGGCATGCACTTTTTAACGCGGGANAGTAGAACAACGGGCGAAANCTAGCCTTCGGGCCGGCAACNGCGACNCCTGCGGGCGCCGTTTTCCCCTTGGGGTGTTNCCGTGTTTTCTATTTTCCCAGTNGGTTCTTCAGGTGAAAACCTTGTCCTGGTTACCTAGGACGAACNGCGGCGGCGCTTTTNGCGTCGTTTTCCTTCTTGGAGACNTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATCAGACGTATAANCGTGGTGT]




>consensus_12671#6
CGTCGGCGCGGTNGCTGCGCGTNGAAGGGGATTAGATGGTGGTTCTNCTGAACTGGCATG
CACTTTTTAACGCGGGANAGTAGAACAACGGGCGAAANCTAGCCTTCGGGCCGGCAACNG
CGACNCCTGCGGGCGCCGTTTTCCCCTTGGGGTGTTNCCGTGTTTTCTATTTTCCCAGTN
GGTTCTTCAGGTGAAAACCTTGTCCTGGTTACCTAGGACGAACNGCGGCGGCGCTTTTNG
CGTCGTTTTCCTTCTTGGAGACNTCGTTTAGAAGTCATATTCCTTTGAGAGTGTTGTGTG
CTTGTTTTGTTTTAAACAATAGGATCAGACGTATAANCGTGGTGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      AATCTACCTGGAAGAACAAACTGCTCGCCCCCGCGTCGCCCACGCGCGGGCGACACGGGG 60
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      GGAAACCCTAGCGCCGCCTCCGCCACTCTCTCCTCCTCTCCCTCCCCTCGCCGCTGCCGG 120
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      AACGCGCCGCCGGAGAACCGCGCGGCCAGCCGGGATGGCGGCGGCGAGGCCAACCCCCGA 180
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      CGGCGCCCCGTCTCCGCGCGTGGATGGCGGGCCGGCGCGTGGTGCAAGGCTGACGACGCG 240
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      GCGTGGAGACGGTGGATCCGGCGCCGCTGCGGCCGGATCTGGCCTCCCCGCGGTTGGATC 300
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      CGGCGGATCCACGCCGGATCTGGCCGGAGGCGGCGGCGGCTAGCGGCTGGTGGCTGGTGG 360
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      CTGGCGGCGACGACGAGAGCCGGAGGCTGGTGGCTGGCGGCCGCTGGCGAAGGAGGCCGG 420
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      TGCATGCAGAGGATGCAGTGGCGACGGCGAGGCCACGGTGGCGGAGGCGGTGGAGGATGG 480
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      CGCGGGGAGACGCGGCTGGAGGCCGACGCATGCGGAGGCCGCGGACGGCGATGCGACTGG 540
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      AGGCTGCGGAGGCCGGCGCACATGGAGGCGCGGCTGGAGGCCGGCGTGCGTGGAGGCCGT 600
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      GGTGGCGGCCGCAGCGGAGGCTCGGCCGATGACGGCGGAGGGCGACGTGGCACAGCCGGC 660
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ---CATACCATTCTAAAAAAAATAAAAAAAAACCAAATCCTTCTCTTCATTCCCAGCCTC 57
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      GACAGGGGACGGCTACAAGGCGCGACGGATCGGCGGTGGTGAAGCCCGTCGGCGGTGGTG 720
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      CGTGACGCACGAGCAGAGTCCGTCGCCTCGCTTCCTCCGCCACCGCCAGCCCTTCCTCAC 117
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      ACGGTGAGGCGATGGCTGCGGTGAGGAGGACGGAGGCGACGGCGATGCGACCAAGCACCC 780
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ----------------------------------------------GCGACCAAGCACCC 14
consensus_12671#2      CATCGCCACTTCCTCCAACGCCGGCGCCTCTCTTCCTTGGCTGGCGCCCATCCTCTCCTC 177
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      GTTGACACGG-CGGTTTGATCGAGGCGGCGATGACGGTCATGCTGTGAGGG-GGGTGTTG 838
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      GTTGACACGGGCGGTCTGGTCGAGGCGGCAACGACGGTCATGCTGTGAGGGTGGGTGTTC 74
consensus_12671#2      CTCGACCAGCGCCTCAACTACAGATCCCCTCTCCAGTCTCATTTTCACTCGTCCCAGCCT 237
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      ------------------------------------------------------------
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      AAGCCTGCGGCGAGCTTCCATCCAGGCGTCTGCCTTCTTGCGGTGGCGGCTTGCCGCCGA 898
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      AAGCCTGTGGCAAGCTTCCTTCCAGGCGTCTGCCCTCTTACGGTGGCGGCTTGCCGC-GA 133
consensus_12671#2      CACNCCTGCGGCGGCGGCGGCGCTGTCGATTCACCGGCGGCGGCACNAGCGACGGCCAAC 297
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      -----------AATTAACTTGCATGCTCTCCAAGAAACTGATGCATCACAGTAACACACA 49
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      AAGATGGCCACGCTGGACGGGCGAGTGCGGGG-AGAGGGGATCCATTCTTCTCTCTCACC 957
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      AAGATGGCCACAGTGGACGAGCGAGTGCGGGGGAGAGGGGATCCATTCTTCTCTCTCACC 193
consensus_12671#2      GAGATCGGATTGTCTAAGGGGTTGGGATTTTGGGGGGGGTATGGCTCCGTCTGAGTGCCC 357
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      GCCACCAATTCACATGTTTCCAGTTCATTTTTCATCAAATACACACTATTACTATCCTAT 109
consensus_12671#5      ----------------------------------------------------------CT 2
consensus_12671#0      TTCTCCCTCTCCAACCCAACCACGTGGATGGACGTGAAGCGCGGTGAAGGTTGAGACTCT 1017
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      CTCTCCCTCTCCAACCCAACCACGTGGATGGATGTGAAGCGCGGTGAAGGTTAGGACTCT 253
consensus_12671#2      GCCGTGGTGACAGGTGGGGCCCCAGAAATGAGGACAAATATCATTCATAAATCCTAATCT 417
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      CTACAGAAAGGCATCTCTATCTCTAACAATTTGCTGCTGCTATCTTGGCAGGAACCCGTA 169
consensus_12671#5      TGAATTAATTGCATGC---TCTCCAAGAAACTGATGC----ATCACAG----AACCCGTA 51
consensus_12671#0      TCTTTGATGGCCGGAC--GGTGGCGAGGCGTCGGCGCGG-TGGCTACGTGTCAAAGGGAA 1074
consensus_12671#6      ----------------------------CGTCGGCGCGG-TNGCTGCGCGTNGAAGGGGA 31
consensus_12671#3      TCTTCGATGGCTAGCC--GGCGGCGAGGCGTCGGCGCGG-TGGCTGCGCGTCGAAGGGGA 310
consensus_12671#2      CGGGTACTGTAGAGCTC--CCCCCGGGATTCCGCGCCCCACCTGCTCGACAGATTGCCCA 475
consensus_12671#4      ------------------------------------------------TTTGAAAGTGCN 12
                                                                                   

consensus_12671#1      CTGCGAGACCGGAACCTCGAAC-GCCATCATCTTCTCCCCTCGAGCAAACCCG-TTGCGG 227
consensus_12671#5      CTGCGAGACCGGAACCTCGAAC-GCCATCATCTTCTCCCCTCGAGCAAACCCG-TTGCGG 109
consensus_12671#0      TTAGATGGTGGTTCTGCTAAACTGGCATGCACTTTTTGACGCGGGAGAGTAGAACAACAG 1134
consensus_12671#6      TTAGATGGTGGTTCTNCTGAACTGGCATGCACTTTTTAACGCGGGANAGTAGAACAACGG 91
consensus_12671#3      TTAGATGGTGGTTCTGCTGAACTGGCATGCACTTTTTAACGCGGGAGAGTAGAACAACGG 370
consensus_12671#2      CCCCAAG-CAGCTAGCCAGGTCTCCCCATGGCATCGCTCCGCGCGGCAACCGGGCTGCCA 534
consensus_12671#4      ACCCAAG-CAG-TAGC--AGTTTCCCAN-------GCTTGTCGGGGGCACCGGNT--NCA 59
                             *   *              *               ** *               

consensus_12671#1      TCGTAGGACGAGATCTCGG--TGATGTCCA-GCTCCTTGCACGCCCTGATGAGCTCCTCC 284
consensus_12671#5      TCGTAGGACGAGATCTCGG--TGATGTCCA-GCTCCTTGCACGCCCTGATGAGCTCCTCC 166
consensus_12671#0      GCGAAAGCCTAGCTTTCGGGCCGGCAACGGCGACGCCTACGGGCGCCGTTTT-CCCCTTG 1193
consensus_12671#6      GCGAAANC-TAGCCTTCGGGCCGGCAACNGCGACNCCTGCGGGCGCCGTTTT-CCCCTTG 149
consensus_12671#3      GCGAAAGCCTAGCCTTCGGGCCGGCAACGGCGACGC-TGCGGGCGCCGTTTT-CCCCTTG 428
consensus_12671#2      TTCTCGCC---GCGCCCGGCGTGCTG-CCGCCCTCCCAGCTCGCCAGGCTCCAGGCGTGG 590
consensus_12671#4      TTTT-GCC---GC-CCCGGNGTG-TG-C--CCCTTCCNAGTTGCCAGGNTCCAGG-GTGG 109
                                  *    ***   *    *       *      **   * *       *  

consensus_12671#1      CCGACCCTCCCAGCTGCCTCCACGGCGCCGCAGGGCGGGTCGCCGCAGATGGCCTTCTG- 343
consensus_12671#5      CCGACCCTCCCAGCTGCCTCC-TGTCACAACAAGCCAGCCAGCTCAAGATA----TCAA- 220
consensus_12671#0      GGGCATTGTCGTGTTTTCTATTTTTCCCAGTGGGTTCTTCAGGTGAAAACCTCGTCCTGG 1253
consensus_12671#6      GGGTGTTNCCGTGTTTTCTATTTT-CCCAGTNGGTTCTTCAGGTGAAAACCTTGTCCTGG 208
consensus_12671#3      GGGTGTTGCCGTGTTTTCTATTTT-CCCAGTGGGTTCTTC-------------------- 467
consensus_12671#2      CTTCGTGTTCCCGCCGCGCTTCGCACCTGGCGTGTTCCTTTTCTTTCCGCTGGATTCTGC 650
consensus_12671#4      -TTTGTGTTCCCCCNGCG-TTTGCAACNTGGGTGTTCNTTTTCTTTCCGTTGGATTCTGC 167
                                *                       *                          

consensus_12671#1      ------CAGCGTGCTGCCGTAGAAGAGGATCTTCCTGTTGTGGTCGTCGACGAGCATGGC 397
consensus_12671#5      ------TACAATGA-GCAGTTTATGTCTAATTACTAGGTGAAATTCTTGGAG-GCGTCGT 272
consensus_12671#0      TTACCTAGGACGGACGGTGGCGGCGCTTTTGTCGTCGTTTTCCTTCTTGGAG-GCATCGT 1312
consensus_12671#6      TTACCTAGGACGAACNGCGGCGGCGCTTTTNGCGTCGTTTTCCTTCTTGGAG-ACNTCGT 267
consensus_12671#3      ----------------------------------------------TTGGAG-ACGTCGT 480
consensus_12671#2      -------------AGGCGGCGGCGGAGTAGCTCGCCGGCGCGCGTACCCGAGGATCGAGG 697
consensus_12671#4      -------------AGGCGGCGGCGGAGTAGTTCGCCGGCGCGCGTACCCGAGGATCGAGG 214
                                                                          *      * 

consensus_12671#1      GTAGAGCTGCCTGTTGGAGC-AGAACACGGACAGCCTCGGCTTCGTC--GCCGTGCCATT 454
consensus_12671#5      TTAGAAGT-CCTATTCCTTT-AGGGTGTTGTGTGCTTATNTTGTNTTAAGTAGTAGGATC 330
consensus_12671#0      TTAGAAGT-CCTATTCCTTTGGG-GTGTTGTGTGCTTGTTTTGTTTTAAACAGTAGGATC 1370
consensus_12671#6      TTAGAAGT-CATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATC 326
consensus_12671#3      TTAGAAGT-CATATTCCTTTGAGAGTGTTGTGTGCTTGTTTTGTTTTAAACAATAGGATC 539
consensus_12671#2      CCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGA 757
consensus_12671#4      CCACGGCGAGGCACGGCGCGAGGAAGGAGAACCCCAAGGTCAGGAACCGCCGGCTGCAGA 274
                         *                   *           *                      *  

consensus_12671#1      GAACTTCTTCT-GCAGCCTGCGGTTCCTGACCTTGGGGTTCTCCTTCCTCGCGCCGTGCC 513
consensus_12671#5      AGACGTAGAC--GCGTGGTGTGGTTGTATATTTTCT--TTTTCCTGTCTATAGTCTCCCA 386
consensus_12671#0      AGACGTAGAC--GCGTGGTGTGGTTGTATATTTTCT--TTTTCCTGACTACAGTCTCCCA 1426
consensus_12671#6      AGACGTATAA--NCGTGGTGT--------------------------------------- 345
consensus_12671#3      AGACGTATAA--GCGTGGTGTGGTTGTTTATTTTCT--TTTTCCTGACTATAGTCTCCCA 595
consensus_12671#2      AGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAA----CAGG 813
consensus_12671#4      AGAAGTTCAATGGCACGGCGACGAAGCCGAGGCTATCCGTGTTCTGCTCCAA----CAGG 330
                         *  *       *     *                                        

consensus_12671#1      TCGCCG-AGGCCTCGATCCTCGGG------TACGAGCGCCGGCGCCCGACTCCGCCGGCG 566
consensus_12671#5      GGACTGTAGGCTTGTATTTTATTC------CTTCAATAGAAACATCGCACTAT-CTTGTG 439
consensus_12671#0      GGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACGTCGCACTAT-CTTGTG 1485
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      GGACTATAGGCTTGTATTTTATTCCTTCTTTATCAATAGAAACATCATACTAT-CTTATG 654
consensus_12671#2      CAGCTCTATGCCATGCTCGTCGACGA----CCACAACAAGAAGATCCTCTTCTATG---- 865
consensus_12671#4      CAGCTCTATGCCATGCTCGTCGACGA----CCACAACAAGAAGATCCTCTTCTATGGCAG 386
                                                                                   

consensus_12671#1      CCGCCTGCAGAAGCCGGAGTGAAGAACTGCACGCCAGGCGAGCTGGGAGGGCGGCAGCAC 626
consensus_12671#5      CGGGT------------------------------------------------------- 444
consensus_12671#0      C----------------------------------------------------------- 1486
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      CGGGTTGTTTCAAAAAAAATGGCCGGGAAAACAAAATAAGGCTTTGCAGACAATTTTTAA 714
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      CACCCTGCAGAAGGCCATCTGCGGTGACCCTCCCTGCGGCGCCGTGGAGGCAGCTGGGAG 446
                                                                                   

consensus_12671#1      GCCGGGCGCGGCGAGAATGGCAGCCCGGGGGCCGCGCGGAGCGATGCCATGGCACGCCCA 686
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      ------------------------------------------------------------
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      AAAAA------------------------------------------------------- 719
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      GATCGGGGAGGAGCTCATCAGGGCGTGCAAGGAGCTGGACATCACCGAGATCTCGTCCTA 506
                                                                                   

consensus_12671#1      CGGGTGGAGACCTTGGCTAGCTGCTTGGGGTGGGCACGCAATCCGTCGAGCAGGTGCGGC 746
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      ------------------------------------------------------------
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      CGACCGC----------------------------------------------------- 513
                                                                                   

consensus_12671#1      GCGGAATACCCGGTGGGAGCTGCTACAGTGCCCGAGATTAGGATTTAGGAATGGGATTTG 806
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      ------------------------------------------------------------
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      TCCTCACTTNTGGGGCCCCACCTGTCACCTGACAGGTAATACAAGGCTTAAGCAAGGGTG 866
consensus_12671#5      ------------------------------------------------------------
consensus_12671#0      ------------------------------------------------------------
consensus_12671#6      ------------------------------------------------------------
consensus_12671#3      ------------------------------------------------------------
consensus_12671#2      ------------------------------------------------------------
consensus_12671#4      ------------------------------------------------------------
                                                                                   

consensus_12671#1      TAATCGCAAAATTCCCCCTCGAGTTTATTCTTTCCGTATCCAAAAA 912
consensus_12671#5      ----------------------------------------------
consensus_12671#0      ----------------------------------------------
consensus_12671#6      ----------------------------------------------
consensus_12671#3      ----------------------------------------------
consensus_12671#2      ----------------------------------------------
consensus_12671#4      ----------------------------------------------